BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0293100 Os01g0293100|AK106850
(379 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G31210.1 | chr2:13296655-13298139 FORWARD LENGTH=429 129 2e-30
AT1G06170.1 | chr1:1885146-1886564 REVERSE LENGTH=421 123 1e-28
AT2G31220.1 | chr2:13303014-13304661 FORWARD LENGTH=459 119 2e-27
AT4G36930.1 | chr4:17414167-17415945 FORWARD LENGTH=374 53 3e-07
AT5G67110.1 | chr5:26785332-26786338 REVERSE LENGTH=211 51 8e-07
AT2G46510.1 | chr2:19091187-19092887 REVERSE LENGTH=567 50 2e-06
AT1G09530.1 | chr1:3077216-3079367 FORWARD LENGTH=525 50 2e-06
AT5G41315.1 | chr5:16529457-16532866 FORWARD LENGTH=638 50 2e-06
AT1G32640.1 | chr1:11799042-11800913 REVERSE LENGTH=624 50 2e-06
AT5G46760.1 | chr5:18974231-18976009 FORWARD LENGTH=593 50 2e-06
AT2G31215.1 | chr2:13299807-13300302 FORWARD LENGTH=130 50 3e-06
AT2G28160.1 | chr2:12004713-12005908 FORWARD LENGTH=319 50 3e-06
AT1G01260.1 | chr1:109595-111367 FORWARD LENGTH=591 49 4e-06
AT4G16430.1 | chr4:9267599-9269002 FORWARD LENGTH=468 49 5e-06
>AT2G31210.1 | chr2:13296655-13298139 FORWARD LENGTH=429
Length = 428
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 128/260 (49%), Gaps = 16/260 (6%)
Query: 136 PADDESAFMVGPFESSPTPRSGGGRKRSRATAGFHGG--------------GPANGVEKK 181
P++D S +++G ++ T R A F G N
Sbjct: 159 PSNDYSGYLLGIDTNTTTQRDESNVGDENNNAQFDSGIIEFSKEIRRKGRGKRKNKPFTT 218
Query: 182 EKQRRLRLTEKYNALMLLIPNRTKEDRATVISDAIEYIQELGRTVEELTLLVEKKRR--R 239
E++RR L E+Y AL LLIP+ +K DRA+++ D I+YI EL R V EL LVE+KR R
Sbjct: 219 ERERRCHLNERYEALKLLIPSPSKGDRASILQDGIDYINELRRRVSELKYLVERKRCGGR 278
Query: 240 REMQGXXXXXXXXXXXXGMDQXXXXXXXXXXXXXXXXXXXPPPRQAPIRSTYIQRRSKET 299
+ ++ +R +++QR+SK T
Sbjct: 279 HKNNEVDDNNNNKNLDDHGNEDDDDDDENMEKKPESDVIDQCSSNNSLRCSWLQRKSKVT 338
Query: 300 FVDVRIVEDDVNIKLTKRRRDGCXXXXXXXXXXXXXXXVHLSGGKIGDCHIYMFNTKIHS 359
VDVRIV+D+V IK+ ++++ C H++GG+IG+ + ++FNTKI+
Sbjct: 339 EVDVRIVDDEVTIKVVQKKKINCLLLVSKVLDQLQLDLHHVAGGQIGEHYSFLFNTKIYE 398
Query: 360 GSPVFASAVASRLIEVVDEY 379
GS ++ASA+A+R+IEVVD++
Sbjct: 399 GSTIYASAIANRVIEVVDKH 418
>AT1G06170.1 | chr1:1885146-1886564 REVERSE LENGTH=421
Length = 420
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 110/196 (56%), Gaps = 17/196 (8%)
Query: 182 EKQRRLRLTEKYNALMLLIPNRTKEDRATVISDAIEYIQELGRTVEELTLLVEKKR-RRR 240
E++RR+ +++ L LIPN TK DRA+++ +AI+YI+EL RT++E LLVEKKR ++R
Sbjct: 221 ERERRVHFKDRFGDLKNLIPNPTKNDRASIVGEAIDYIKELLRTIDEFKLLVEKKRVKQR 280
Query: 241 EMQGXXXXXXXXXXXXGMDQXXXXXXXXXXXXXXXXXXXPPPRQAPIRSTYIQRRSKETF 300
+G + + + +R ++++R+SK T
Sbjct: 281 NREGDDVVDENFKAQSEVVEQCLINK----------------KNNALRCSWLKRKSKFTD 324
Query: 301 VDVRIVEDDVNIKLTKRRRDGCXXXXXXXXXXXXXXXVHLSGGKIGDCHIYMFNTKIHSG 360
VDVRI++D+V IK+ ++++ C H++G +IG+ H ++FN KI G
Sbjct: 325 VDVRIIDDEVTIKIVQKKKINCLLFVSKVVDQLELDLHHVAGAQIGEHHSFLFNAKISEG 384
Query: 361 SPVFASAVASRLIEVV 376
S V+ASA+A R++EV+
Sbjct: 385 SSVYASAIADRVMEVL 400
>AT2G31220.1 | chr2:13303014-13304661 FORWARD LENGTH=459
Length = 458
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 115/224 (51%), Gaps = 14/224 (6%)
Query: 155 RSGGGRKRSRATAGFHGGGPANGVEKKEKQRRLRLTEKYNALMLLIPNRTKEDRATVISD 214
R G G ++SR + E++RR+ +++ L LIPN TK DRA+++ +
Sbjct: 238 RKGRGSRKSRTSP-------------TERERRVHFNDRFFDLKNLIPNPTKIDRASIVGE 284
Query: 215 AIEYIQELGRTVEELTLLVEKKRRRREMQGXXXXXXXXXXXXGMDQXXXXXXXXXXXXXX 274
AI+YI+EL RT+EE +LVEKKR R + +
Sbjct: 285 AIDYIKELLRTIEEFKMLVEKKRCGR-FRSKKRARVGEGGGGEDQEEEEDTVNYKPQSEV 343
Query: 275 XXXXXPPPRQAPIRSTYIQRRSKETFVDVRIVEDDVNIKLTKRRRDGCXXXXXXXXXXXX 334
+R ++++R+SK T VDVRI++D+V IKL ++++ C
Sbjct: 344 DQSCFNKNNNNSLRCSWLKRKSKVTEVDVRIIDDEVTIKLVQKKKINCLLFTTKVLDQLQ 403
Query: 335 XXXVHLSGGKIGDCHIYMFNTKIHSGSPVFASAVASRLIEVVDE 378
H++GG+IG+ + ++FNTKI GS V+AS +A L+EVV++
Sbjct: 404 LDLHHVAGGQIGEHYSFLFNTKICEGSCVYASGIADTLMEVVEK 447
>AT4G36930.1 | chr4:17414167-17415945 FORWARD LENGTH=374
Length = 373
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 36/50 (72%)
Query: 182 EKQRRLRLTEKYNALMLLIPNRTKEDRATVISDAIEYIQELGRTVEELTL 231
EK+RR R+ EK AL LIPN K D+A+++ +AIEY+++L V+ LT+
Sbjct: 206 EKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLTM 255
>AT5G67110.1 | chr5:26785332-26786338 REVERSE LENGTH=211
Length = 210
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 59/129 (45%), Gaps = 17/129 (13%)
Query: 107 PPXXXXXXXTEAYFRGGPRTAGSSSLVFGPADDESAFMVGPFESSPTPRSGGGRKRS--- 163
PP E +F P +G + G E+ FE RSG ++ S
Sbjct: 38 PPKSTNVSSAETFF---PSVSGGAVSSVGYGVSETGQDKYAFEHK---RSGAKQRNSLKR 91
Query: 164 RATAGFHGGGPANGVEKKEKQRRLRLTEKYNALMLLIPNRTKEDRATVISDAIEYIQELG 223
A FH EK+RR ++ EK AL LIPN K D+A+++ +AIEY+++L
Sbjct: 92 NIDAQFHNLS--------EKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQ 143
Query: 224 RTVEELTLL 232
V+ L ++
Sbjct: 144 LQVQTLAVM 152
>AT2G46510.1 | chr2:19091187-19092887 REVERSE LENGTH=567
Length = 566
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 41/63 (65%), Gaps = 6/63 (9%)
Query: 171 GGGPANGVEK------KEKQRRLRLTEKYNALMLLIPNRTKEDRATVISDAIEYIQELGR 224
G PANG E+ E+QRR +L +++ AL ++PN +K D+A+++ DAI YI+EL
Sbjct: 383 GRKPANGREEPLNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAISYIKELQE 442
Query: 225 TVE 227
V+
Sbjct: 443 KVK 445
>AT1G09530.1 | chr1:3077216-3079367 FORWARD LENGTH=525
Length = 524
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 50/83 (60%), Gaps = 10/83 (12%)
Query: 149 ESSPTPRSGGGRKRSRATAGFHGGGPANGVEKKEKQRRLRLTEKYNALMLLIPNRTKEDR 208
E+ P+ R+G G KRSR +A H E++RR R+ EK AL LIPN K D+
Sbjct: 329 EAGPS-RTGLGSKRSR-SAEVHN--------LSERRRRDRINEKMRALQELIPNCNKVDK 378
Query: 209 ATVISDAIEYIQELGRTVEELTL 231
A+++ +AIEY++ L V+ +++
Sbjct: 379 ASMLDEAIEYLKSLQLQVQIMSM 401
>AT5G41315.1 | chr5:16529457-16532866 FORWARD LENGTH=638
Length = 637
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 34/48 (70%)
Query: 182 EKQRRLRLTEKYNALMLLIPNRTKEDRATVISDAIEYIQELGRTVEEL 229
EK+RR +L E++ L +IP+ K D+ +++ D IEY+QEL R V+EL
Sbjct: 446 EKKRREKLNERFMTLRKIIPSINKIDKVSILDDTIEYLQELERRVQEL 493
>AT1G32640.1 | chr1:11799042-11800913 REVERSE LENGTH=624
Length = 623
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 39/62 (62%), Gaps = 6/62 (9%)
Query: 171 GGGPANGVEK------KEKQRRLRLTEKYNALMLLIPNRTKEDRATVISDAIEYIQELGR 224
G PANG E+ E+QRR +L +++ AL ++PN +K D+A+++ DAI YI EL
Sbjct: 440 GRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAYINELKS 499
Query: 225 TV 226
V
Sbjct: 500 KV 501
>AT5G46760.1 | chr5:18974231-18976009 FORWARD LENGTH=593
Length = 592
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 50/93 (53%), Gaps = 21/93 (22%)
Query: 142 AFMVGPFESSPTPRSGGGRKRSRATAGFHGGGPANGVEK------KEKQRRLRLTEKYNA 195
A +V P E P R GRK PANG E+ E+QRR +L +++ +
Sbjct: 389 AIVVEPPEKKPRKR---GRK------------PANGREEPLNHVEAERQRREKLNQRFYS 433
Query: 196 LMLLIPNRTKEDRATVISDAIEYIQELGRTVEE 228
L ++PN +K D+A+++ DAI YI EL +++
Sbjct: 434 LRAVVPNVSKMDKASLLGDAISYINELKSKLQQ 466
>AT2G31215.1 | chr2:13299807-13300302 FORWARD LENGTH=130
Length = 129
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 35/56 (62%)
Query: 182 EKQRRLRLTEKYNALMLLIPNRTKEDRATVISDAIEYIQELGRTVEELTLLVEKKR 237
E++RR +++ L LIPN TK A+++ D I YI EL R V EL LVEKK+
Sbjct: 28 ERERRALFNDRFFDLKNLIPNPTKGGEASIVQDGIVYINELQRLVSELKYLVEKKK 83
>AT2G28160.1 | chr2:12004713-12005908 FORWARD LENGTH=319
Length = 318
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 54/109 (49%), Gaps = 17/109 (15%)
Query: 125 RTAGSSSLVFGPADDESAFMVGPFESSPTPRSGGGRK----RSRATAGFHGGGPANGVEK 180
R+ S+ G +DE + G S+ T + G RK RSR
Sbjct: 88 RSFDGDSVRAGGEEDEEDYNDGDDSSATTTNNDGTRKTKTDRSRTLIS------------ 135
Query: 181 KEKQRRLRLTEKYNALMLLIPNRTKEDRATVISDAIEYIQELGRTVEEL 229
E++RR R+ +K AL L+PN TK D+A+++ DA+ Y+QEL ++L
Sbjct: 136 -ERRRRGRMKDKLYALRSLVPNITKMDKASIVGDAVLYVQELQSQAKKL 183
>AT1G01260.1 | chr1:109595-111367 FORWARD LENGTH=591
Length = 590
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%)
Query: 156 SGGGRKRSRATAGFHGGGPANGVEKKEKQRRLRLTEKYNALMLLIPNRTKEDRATVISDA 215
SG R R R +G A + E+QRR +L +++ AL ++PN +K D+A+++ DA
Sbjct: 412 SGNNRPRKRGRRPANGRAEALNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDA 471
Query: 216 IEYIQEL 222
+ YI EL
Sbjct: 472 VSYINEL 478
>AT4G16430.1 | chr4:9267599-9269002 FORWARD LENGTH=468
Length = 467
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 6/79 (7%)
Query: 171 GGGPANGVEKK------EKQRRLRLTEKYNALMLLIPNRTKEDRATVISDAIEYIQELGR 224
G PANG E+ E+QRR +L +++ AL ++PN +K D+A++++DAI YI ++ +
Sbjct: 308 GRKPANGREEALNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLADAITYITDMQK 367
Query: 225 TVEELTLLVEKKRRRREMQ 243
+ + +RR Q
Sbjct: 368 KIRVYETEKQIMKRRESNQ 386
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.136 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,552,338
Number of extensions: 239877
Number of successful extensions: 748
Number of sequences better than 1.0e-05: 17
Number of HSP's gapped: 751
Number of HSP's successfully gapped: 20
Length of query: 379
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 279
Effective length of database: 8,364,969
Effective search space: 2333826351
Effective search space used: 2333826351
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 112 (47.8 bits)