BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os01g0290600 Os01g0290600|Os01g0290600
         (479 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G62130.1  | chr3:23004994-23006358 FORWARD LENGTH=455          485   e-137
AT5G26600.2  | chr5:9377455-9378882 FORWARD LENGTH=476            481   e-136

>AT3G62130.1 | chr3:23004994-23006358 FORWARD LENGTH=455
          Length = 454

 Score =  485 bits (1249), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 234/430 (54%), Positives = 300/430 (69%), Gaps = 6/430 (1%)

Query: 40  ITDAEVRAEFAHHDRAVARLNNGTFGCCPASVLAARARWQRLFLSQPDAFYFHHLQPGLX 99
           +T++++ +EFAHH   VAR+NNG+FGCCP SVL A+  WQ  +L QPD FYF+ L+ GL 
Sbjct: 28  LTESDIDSEFAHHQTGVARINNGSFGCCPGSVLEAQREWQLRYLRQPDEFYFNGLRRGLL 87

Query: 100 XXXXXXXXXXXXXXXXEVSLVDNVTTAAAIIMQHVAWSFAEGDFARGDVVLMFLYTYCSI 159
                           EVSLVDN TTAAAI++Q V   F+EG + + D V+MF   + S+
Sbjct: 88  ASRTVISDLINADDVDEVSLVDNATTAAAIVLQKVGRCFSEGKYKKEDTVVMFHCAFQSV 147

Query: 160 KNSIHAYVARAGATVVEVPLPFPVSSPDAIVAEFXXXXXXXXXXXXXXXXXXXIDHITAM 219
           K SI AYV+R G + VEV LPFPV+S + I+++F                   IDHIT+M
Sbjct: 148 KKSIQAYVSRVGGSTVEVRLPFPVNSNEEIISKFREGLEKGRANGRTVRLAI-IDHITSM 206

Query: 220 PTVLIPVKELVAICREEGVDKVFVDAAHAVGQVPVDVRDIGADFYASNLHKWFFCPSAVA 279
           P VL+PV+ELV ICREEGV++VFVDAAHA+G V VDV++IGAD+Y SNLHKWFFCP ++A
Sbjct: 207 PCVLMPVRELVKICREEGVEQVFVDAAHAIGSVKVDVKEIGADYYVSNLHKWFFCPPSIA 266

Query: 280 FIHTRKDDPVSSKLHHPVVSSEYGNGLPMESAWIGVRDYSAQLVVPDVVDFVNRFDGGVE 339
           F + +K     S +HHPVVS E+GNGLP+ESAWIG RDYS+QLVVP V++FVNRF+GG+E
Sbjct: 267 FFYCKKRGS-ESDVHHPVVSHEFGNGLPIESAWIGTRDYSSQLVVPSVMEFVNRFEGGME 325

Query: 340 GIRRRNHDKVVEMGTMLAAAWGTFLGTPPEMCGSMLMVGLPGSLGVGSEDDAVGLRTMLR 399
           GI  +NHD+ V MG MLA AWGT LG+PPEMC  M+M+GLP  L VGS++DA+ LR+ LR
Sbjct: 326 GIMMKNHDEAVRMGLMLADAWGTNLGSPPEMCVGMVMIGLPSKLCVGSDEDAIKLRSYLR 385

Query: 400 KQFKVEVPLYYNSKAAAADAPPEMVKDGNGDPVTGYVRISHQVYNVREEYEALRDAVAKL 459
             + VEVP++Y           E VKD +   +T YVRISHQVYN  E+YE LRDA+ +L
Sbjct: 386 VHYSVEVPVFY----LGLRDGEEGVKDKDSGLITAYVRISHQVYNKTEDYERLRDAITEL 441

Query: 460 VADGFTCRKL 469
           V D  TC+ L
Sbjct: 442 VKDQMTCQNL 451



>AT5G26600.2 | chr5:9377455-9378882 FORWARD LENGTH=476
          Length = 475

 Score =  481 bits (1238), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 232/420 (55%), Positives = 289/420 (68%), Gaps = 13/420 (3%)

Query: 51  HHDRAVARLNNGTFGCCPASVLAARARWQRLFLSQPDAFYFHHLQPGLXXXXXXXXXXXX 110
           HHD   AR+NNG+FGCCP+S+LA +  WQ  FL QPD FYF  L+P +            
Sbjct: 66  HHDPDFARINNGSFGCCPSSILALQRDWQLRFLRQPDRFYFDELKPKISDSRSVIKRLIN 125

Query: 111 XXXXXEVSLVDNVTTAAAIIMQHVAWSFAEGDFARGDVVLMFLYTYCSIKNSIHAYVARA 170
                EVS+VDN TTAAAI++Q  AW+F EG F +GD V+M  Y Y S+K S+ AYV R+
Sbjct: 126 AEHDDEVSIVDNATTAAAIVLQQTAWAFREGRFDKGDAVVMLHYAYGSVKKSVEAYVTRS 185

Query: 171 GATVVEVPLPFPVSSPDAIVAEFXXXXXXXXXXXXXXXXXXXIDHITAMPTVLIPVKELV 230
           G  V EV LPFPV S D I+  F                   IDH+T+MP+V+IP+KELV
Sbjct: 186 GGHVTEVQLPFPVISADEIIDRFRIGLESGKANGRRVRLAL-IDHVTSMPSVVIPIKELV 244

Query: 231 AICREEGVDKVFVDAAHAVGQVPVDVRDIGADFYASNLHKWFFCPSAVAFIHTRKDDPVS 290
            ICR EGVD+VFVDAAH +G V VD+++IGADFY SNLHKWFF P +VAF++ RK     
Sbjct: 245 KICRREGVDQVFVDAAHGIGCVDVDMKEIGADFYTSNLHKWFFAPPSVAFLYCRKSSNGG 304

Query: 291 -SKLHHPVVSSEYGNGLPMESAWIGVRDYSAQLVVPDVVDFVNRFDGGVEGIRRRNHDKV 349
            + LHHPVVS+EYGNGL +ES+W+G RDYSAQLVVP +++FVNRF+GG++GI++RNH+ V
Sbjct: 305 VADLHHPVVSNEYGNGLAVESSWVGTRDYSAQLVVPSILEFVNRFEGGIDGIKKRNHESV 364

Query: 350 VEMGTMLAAAWGTFLGTPPEMCGSMLMVGLPGSLGVGSEDDAVGLRTMLRKQFKVEVPLY 409
           VEMG ML  +WGT LG PPEMC SM+MVGLP  LGV SE D + LRT LR++F++E+P+Y
Sbjct: 365 VEMGQMLVKSWGTQLGCPPEMCASMIMVGLPVCLGVSSESDVLKLRTFLREKFRIEIPIY 424

Query: 410 YNSKAAAADAPPEMVKDGNGDPVTGYVRISHQVYNVREEYEALRDAVAKLVADGFTCRKL 469
           +         PP    DG  DP+TGYVRIS QVYN  E+Y  LRDA+  LV DGF C  L
Sbjct: 425 FR--------PP---GDGEIDPITGYVRISFQVYNKPEDYHRLRDAINGLVRDGFKCTSL 473



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.322    0.136    0.416 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 9,146,221
Number of extensions: 356945
Number of successful extensions: 673
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 667
Number of HSP's successfully gapped: 2
Length of query: 479
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 377
Effective length of database: 8,310,137
Effective search space: 3132921649
Effective search space used: 3132921649
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 114 (48.5 bits)