BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os01g0279200 Os01g0279200|AK103258
         (439 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G26990.1  | chr2:11519684-11522412 REVERSE LENGTH=440          782   0.0  
AT1G29150.1  | chr1:10181240-10182499 FORWARD LENGTH=420           94   2e-19

>AT2G26990.1 | chr2:11519684-11522412 REVERSE LENGTH=440
          Length = 439

 Score =  782 bits (2019), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/438 (84%), Positives = 410/438 (93%)

Query: 1   MGSDADMEDYGFEYSDDEPEEQDVDIENQYYNSKGMVETDPEGALAGFDQVVRMEPEKAE 60
           M SDADMEDYGFEYSD+E EEQDVDIENQYYNSKGMVET+PE AL+GF +VV+MEPEKA+
Sbjct: 1   MASDADMEDYGFEYSDEEQEEQDVDIENQYYNSKGMVETEPEEALSGFAEVVQMEPEKAD 60

Query: 61  WGFKALKQTVKLYYKLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQN 120
           WGFKALKQTVK+YY+LGKYKEMM+AY EMLTYIKSAVTRNYSEKCINNIMDFVSGSASQN
Sbjct: 61  WGFKALKQTVKIYYRLGKYKEMMEAYTEMLTYIKSAVTRNYSEKCINNIMDFVSGSASQN 120

Query: 121 FSLLQEFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDG 180
             LLQEFYQTTLKALEEAKNERLWFKTNLKLC IWFD+GEY RM+KILKELHKSCQ+EDG
Sbjct: 121 TGLLQEFYQTTLKALEEAKNERLWFKTNLKLCNIWFDIGEYRRMTKILKELHKSCQKEDG 180

Query: 181 SDDQKKGTQLLEVYAIEIQMYTETKNNKKLKELYTKALSIKSAIPHPRIMGIIRECGGKM 240
           +DDQKKG+QLLEVYAIEIQ+YTETK+NKKLK+LY KAL+IKSAIPHPRIMGIIRECGGKM
Sbjct: 181 TDDQKKGSQLLEVYAIEIQIYTETKDNKKLKQLYHKALAIKSAIPHPRIMGIIRECGGKM 240

Query: 241 HMAERQWADAATDFFEAFKNYDEAGNPRRIQCLKYLVLANMLMESEVNPFDGQEAKPYKN 300
           HMAERQW +AATDFFEAFKNYDEAGN RRIQCLKYLVLANMLMESEVNPFDGQEAKPYKN
Sbjct: 241 HMAERQWEEAATDFFEAFKNYDEAGNQRRIQCLKYLVLANMLMESEVNPFDGQEAKPYKN 300

Query: 301 DPEILAMTNLIAAYQKNDIMEFEKILKSNRRTIMDDPFIRNYIEDLLKNIRTQVLLKLIK 360
           DPEILAMTNLIAAYQ+N+I+EFE+ILKSNRRTIMDDPFIRNY+EDLLK +RTQVLLKLIK
Sbjct: 301 DPEILAMTNLIAAYQRNEIIEFERILKSNRRTIMDDPFIRNYMEDLLKKVRTQVLLKLIK 360

Query: 361 PYTRIRIPFISQELNFPEKDVEQLLVSLILDNRIQGHIDQVNKLLERGDRSKGMRKYQAI 420
           PYT+I IPFIS+ELN PE DV +LLVSLILD+RI GHID++N+ L RGD   G + ++A+
Sbjct: 361 PYTKIGIPFISKELNVPETDVTELLVSLILDSRIDGHIDEMNRYLLRGDSGNGRKLHKAV 420

Query: 421 DKWNTQLKNIYQTVSNRV 438
           DKWN+QLK++   +++RV
Sbjct: 421 DKWNSQLKSLSSNITSRV 438



>AT1G29150.1 | chr1:10181240-10182499 FORWARD LENGTH=420
          Length = 419

 Score = 93.6 bits (231), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 81/323 (25%), Positives = 152/323 (47%), Gaps = 19/323 (5%)

Query: 87  REMLTYIK---SAVTRNYSEKCINNIMDFVS---GSASQNFSLLQEFYQTTLKALEEAKN 140
           R++LT ++   S + +  + K +  I+D V+   G+     +L +E  + T       K 
Sbjct: 64  RKLLTKLRPFFSLIPKAKTAKIVRGIIDAVAKIPGTTDLQITLCKEMVEWT----RAEKR 119

Query: 141 ERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGSDDQKKGTQLLEVYAIEIQM 200
             L  +   +L  +  +  EY     +L  L K  +R D          L+++  +E ++
Sbjct: 120 TFLRQRVEARLAALLMENKEYVEALALLSTLVKEVRRLDDK------LLLVDIDLLESKL 173

Query: 201 YTETKNNKKLKELYTKALSIKSAI-PHPRIMGIIRECGGKMHMAERQWADAATDFFEAFK 259
           +   +N  K K   T A +  +AI   P   G I    G +H  E+ +    + FFEAF+
Sbjct: 174 HFSLRNLPKAKAALTAARTAANAIYVPPAQQGTIDLQSGILHAEEKDYKTGYSYFFEAFE 233

Query: 260 NYDEAGNPRRIQCLKYLVLANMLMES--EVNPFDGQEAKPYKNDPEILAMTNLIAAYQKN 317
           +++  G+PR +  LKY++L  +++    +V      +A      P++ AM  +  A+ K 
Sbjct: 234 SFNALGDPRAVFSLKYMLLCKIMVSQADDVAGIISSKAGLQYVGPDLDAMKAVADAHSKR 293

Query: 318 DIMEFEKILKSNRRTIMDDPFIRNYIEDLLKNIRTQVLLKLIKPYTRIRIPFISQELNFP 377
            +  FE  L+  +  + DDP +  ++  L   +  Q L +LI+P++R+ I  I++ +  P
Sbjct: 294 SLKLFENALRDYKAQLEDDPIVHRHLSSLYDTLLEQNLCRLIEPFSRVEIAHIAELIGLP 353

Query: 378 EKDVEQLLVSLILDNRIQGHIDQ 400
              VE+ L  +ILD +  G +DQ
Sbjct: 354 LDHVEKKLSQMILDKKFAGTLDQ 376



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.317    0.134    0.386 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 9,528,407
Number of extensions: 406780
Number of successful extensions: 1428
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 1431
Number of HSP's successfully gapped: 2
Length of query: 439
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 337
Effective length of database: 8,310,137
Effective search space: 2800516169
Effective search space used: 2800516169
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 113 (48.1 bits)