BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os01g0276800 Os01g0276800|AK102926
         (614 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G56360.1  | chr5:22823586-22827950 REVERSE LENGTH=648          456   e-128
AT2G42390.1  | chr2:17651381-17652509 REVERSE LENGTH=213          151   1e-36

>AT5G56360.1 | chr5:22823586-22827950 REVERSE LENGTH=648
          Length = 647

 Score =  456 bits (1174), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 267/623 (42%), Positives = 341/623 (54%), Gaps = 49/623 (7%)

Query: 28  LGIPPQDEAYFRGGV-IRCRDGSGRFARDKLNDDFCDCPDGTDEPGTSACPEGKFYCQNA 86
           LGI PQDE Y++    I+C+DGS +F + +LNDDFCDC DGTDEPGTSACP GKFYC+NA
Sbjct: 38  LGISPQDEKYYKSSSEIKCKDGSKKFTKAQLNDDFCDCSDGTDEPGTSACPTGKFYCRNA 97

Query: 87  GHSPITIFSSRVNDGICDCCDGSDEYDSNVTCKNTCWEAGKAARDKLKKKVATYKSGVVI 146
           GHSP+ +FSSRVNDGICDCCDGSDEYD +V+C+NTCWEAGKAAR+ LKKK+ TY  G+VI
Sbjct: 98  GHSPVILFSSRVNDGICDCCDGSDEYDGHVSCQNTCWEAGKAARENLKKKIETYNQGLVI 157

Query: 147 RNQEIQKAKVXXXXXXXXXXXXXXXXXXXQGLVDKLTXXXXXXXXXXXXXXXXXXXXXXX 206
           R QEI++AKV                   +GLVD+L                        
Sbjct: 158 RRQEIEQAKVGLEKDAAELKKLKSEQKILKGLVDQLKDRKEQIEKVEEKERLQKEKEEKE 217

Query: 207 XXXXXXXXXXXXXXXXXXXXEVDSQENHETVQEDESKVAEHHDGHATSHD-----NHTPE 261
                                 DS++  E+  ++ +     HD   T HD        P 
Sbjct: 218 KKEAELAAQQGKGDAEEKTD--DSEKVEESSHDEGTPAVSQHD-ETTHHDEIGNYKDYPS 274

Query: 262 SESSVEQHDPESQDDISIKAAPADESPPEETSAAPTKEQESTPAD---SEGLSREE---- 314
            E    + +P S  D +    PADE   E    + + E  S+P D   ++G + +E    
Sbjct: 275 DEEPAAEGEPTSILDEATHTNPADEHVVERKEESTSSEDSSSPTDESQNDGSAEKEESDE 334

Query: 315 -------------------LGRLVASRWTGEKVDEVSKDDKNEHEAEHDMPXXXXXXXXX 355
                              LGRLVASRWTGEK D+ ++ D        D+P         
Sbjct: 335 VKKVEDFVTEKKEELSKEELGRLVASRWTGEKSDKPTEAD--------DIPKADDQENHE 386

Query: 356 XXXVPESAEDSYAGYHSEVEDDRHKYXXXXXXXXXXXXXXXXXXXXXASYXXXXXXXXXX 415
              +     D   G+ S+ ++D                         +S           
Sbjct: 387 HTPITAHEADEDDGFVSDGDEDTSDDGKYSDHEPEDDSYEEEYRHDSSSSYKSDADDDVD 446

Query: 416 XXXFTASGQASWLDKIQQTVQNVLRTFNFFKT-PVDLSEASRVRKEYDDASSKLSKIQSR 474
               T++   +WL+KIQ+TV+N+L   N F+T PVD SEA RVRKEYD++SSKL+KIQSR
Sbjct: 447 FSETTSN--PTWLEKIQKTVKNILLAVNLFQTTPVDKSEADRVRKEYDESSSKLNKIQSR 504

Query: 475 ISTLTDKLKHDFGKEKEFYYFYDQCFESKEGKYVYKVCPFKKASQVEGHSTTSLGRWDKF 534
           IS+L  KLK DFG EKEFY F+ +CFESK+GKY YKVC +K+A+Q EG+S T LG WDKF
Sbjct: 505 ISSLEKKLKQDFGPEKEFYSFHGRCFESKQGKYTYKVCAYKEATQEEGYSKTRLGEWDKF 564

Query: 535 EESYRVMQFSNGDRCWNGPDRSLKVRLRCGLNNELNGVDEPSRCEYVAVLSTPALCDXXX 594
           E SY+ M ++NG++CWNGPDRSLKV+LRCGL NEL  VDEPSRCEY A+LSTPA C    
Sbjct: 565 ENSYQFMSYTNGEKCWNGPDRSLKVKLRCGLKNELMDVDEPSRCEYAAILSTPARCLEDK 624

Query: 595 XXXXXXXXXASSNQ---RDHDEL 614
                       NQ   ++HDEL
Sbjct: 625 LKELQQKLEKLMNQDKPQNHDEL 647



>AT2G42390.1 | chr2:17651381-17652509 REVERSE LENGTH=213
          Length = 212

 Score =  151 bits (381), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 66/101 (65%), Positives = 78/101 (77%)

Query: 28  LGIPPQDEAYFRGGVIRCRDGSGRFARDKLNDDFCDCPDGTDEPGTSACPEGKFYCQNAG 87
           +G+ P DE YF   VI+C+DGS  F RD+LND+FCDC DGTDEPGTSACP GKFYC+N G
Sbjct: 26  VGVHPLDEKYFDSDVIKCKDGSKSFTRDRLNDNFCDCLDGTDEPGTSACPNGKFYCRNIG 85

Query: 88  HSPITIFSSRVNDGICDCCDGSDEYDSNVTCKNTCWEAGKA 128
            SP  ++SSRVND ICDCCDGSDEY+S++ C NTC   G  
Sbjct: 86  SSPKFVYSSRVNDRICDCCDGSDEYESSIHCPNTCIMGGNV 126



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.311    0.129    0.386 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 11,124,000
Number of extensions: 454275
Number of successful extensions: 1704
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 1703
Number of HSP's successfully gapped: 4
Length of query: 614
Length of database: 11,106,569
Length adjustment: 104
Effective length of query: 510
Effective length of database: 8,255,305
Effective search space: 4210205550
Effective search space used: 4210205550
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 115 (48.9 bits)