BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0276100 Os01g0276100|AK059596
(362 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G03290.1 | chr5:794043-795939 FORWARD LENGTH=375 625 e-179
AT3G09810.1 | chr3:3008753-3011070 FORWARD LENGTH=375 588 e-168
AT4G35260.1 | chr4:16774494-16776233 REVERSE LENGTH=368 338 3e-93
AT4G35650.1 | chr4:16908584-16909973 FORWARD LENGTH=369 327 8e-90
AT2G17130.1 | chr2:7461062-7462466 REVERSE LENGTH=368 325 2e-89
AT1G32480.1 | chr1:11741083-11741727 FORWARD LENGTH=215 172 3e-43
AT5G14200.1 | chr5:4576220-4578111 FORWARD LENGTH=410 156 2e-38
AT1G31180.1 | chr1:11142843-11144617 REVERSE LENGTH=405 153 2e-37
AT1G80560.1 | chr1:30287833-30290126 FORWARD LENGTH=406 151 5e-37
>AT5G03290.1 | chr5:794043-795939 FORWARD LENGTH=375
Length = 374
Score = 625 bits (1612), Expect = e-179, Method: Compositional matrix adjust.
Identities = 292/336 (86%), Positives = 318/336 (94%)
Query: 27 ASGETVRATLFPGDGIGPEIAESVKQVFNVAGVPIEWEEHYVGTEVDPRTESFLTWESLE 86
+S + ATLFPGDGIGPEIAESVK+VF AGVPIEWEEHYVGTE+DPRT+SFLTWESLE
Sbjct: 39 SSTTPITATLFPGDGIGPEIAESVKKVFTTAGVPIEWEEHYVGTEIDPRTQSFLTWESLE 98
Query: 87 SVRRNKVGLKGPMATPIGKGHRSLNLTLRKELGLYANVRPCNSLPGYKTRYDDVNLVTIR 146
SVRRNKVGLKGPMATPIGKGHRSLNLTLRKEL LYANVRPC SLPGYKTRYDDV+L+TIR
Sbjct: 99 SVRRNKVGLKGPMATPIGKGHRSLNLTLRKELNLYANVRPCYSLPGYKTRYDDVDLITIR 158
Query: 147 ENTEGEYSGLEHQVVRGVVESLKIITRQASLRVAEYAFHYAKTNGRERVSAIHKANIMRK 206
ENTEGEYSGLEHQVVRGVVESLKIITRQASLRVAEYAF YAKT+GRERVSAIHKANIM+K
Sbjct: 159 ENTEGEYSGLEHQVVRGVVESLKIITRQASLRVAEYAFLYAKTHGRERVSAIHKANIMQK 218
Query: 207 TDGLFLKCCREVAEKYPEIVYEEVIIDNCCMTLVKNPGLFDVLVMPNLYGDIISDLCAGL 266
TDGLFLKCCREVAEKYPEI YEEV+IDNCCM LVKNP LFDVLVMPNLYGDIISDLCAGL
Sbjct: 219 TDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPALFDVLVMPNLYGDIISDLCAGL 278
Query: 267 IGGLGLTPSCNIGEGGICLAEAVHGSAPDIAGKNLANPTALMLSAVMMLRHLQFNNQADR 326
+GGLGLTPSCNIGE G+ LAEAVHGSAPDIAGKNLANPTAL+LS VMMLRHL+FN QA++
Sbjct: 279 VGGLGLTPSCNIGEDGVALAEAVHGSAPDIAGKNLANPTALLLSGVMMLRHLKFNEQAEQ 338
Query: 327 IHNAILQTISEGKFRTADLGGKASTSDFTKAVCDHI 362
IH+AI+ TI+EGK+RTADLGG ++T++FTKA+CDH+
Sbjct: 339 IHSAIINTIAEGKYRTADLGGSSTTTEFTKAICDHL 374
>AT3G09810.1 | chr3:3008753-3011070 FORWARD LENGTH=375
Length = 374
Score = 588 bits (1517), Expect = e-168, Method: Compositional matrix adjust.
Identities = 273/336 (81%), Positives = 309/336 (91%)
Query: 27 ASGETVRATLFPGDGIGPEIAESVKQVFNVAGVPIEWEEHYVGTEVDPRTESFLTWESLE 86
+S ++ATLFPGDGIGPEIAESVKQVF A V I+W+E +VGTEVDPRT SFLTW++L+
Sbjct: 39 SSSTPIKATLFPGDGIGPEIAESVKQVFTAADVVIDWDEQFVGTEVDPRTNSFLTWDNLQ 98
Query: 87 SVRRNKVGLKGPMATPIGKGHRSLNLTLRKELGLYANVRPCNSLPGYKTRYDDVNLVTIR 146
SV +NKVGLKGPMATPIGKGHRSLNLTLRKEL LYANVRPC SLPGYKTRYDDV+L+TIR
Sbjct: 99 SVLKNKVGLKGPMATPIGKGHRSLNLTLRKELNLYANVRPCYSLPGYKTRYDDVDLITIR 158
Query: 147 ENTEGEYSGLEHQVVRGVVESLKIITRQASLRVAEYAFHYAKTNGRERVSAIHKANIMRK 206
ENTEGEYSGLEHQVV+GVVESLKIITR+AS+RVAEYAF YAKT+GR++VSAIHKANIM+K
Sbjct: 159 ENTEGEYSGLEHQVVKGVVESLKIITRKASMRVAEYAFLYAKTHGRKKVSAIHKANIMQK 218
Query: 207 TDGLFLKCCREVAEKYPEIVYEEVIIDNCCMTLVKNPGLFDVLVMPNLYGDIISDLCAGL 266
TDGLFL+CC EVA KYPEI YE+V+IDNCCM LVKNP LFDVLVMPNLYGDIISDLCAGL
Sbjct: 219 TDGLFLQCCDEVAAKYPEIYYEKVVIDNCCMMLVKNPALFDVLVMPNLYGDIISDLCAGL 278
Query: 267 IGGLGLTPSCNIGEGGICLAEAVHGSAPDIAGKNLANPTALMLSAVMMLRHLQFNNQADR 326
+GGLGLTPS NIGE GI LAEAVHGSAPDIAG NLANPTAL+LS VMMLRHL+ N QA++
Sbjct: 279 VGGLGLTPSMNIGEDGIALAEAVHGSAPDIAGMNLANPTALLLSGVMMLRHLKLNKQAEQ 338
Query: 327 IHNAILQTISEGKFRTADLGGKASTSDFTKAVCDHI 362
IH+AI+ TI+EGK+RTADLGG ++T+DFTKA+CDH+
Sbjct: 339 IHSAIINTIAEGKYRTADLGGSSTTTDFTKAICDHL 374
>AT4G35260.1 | chr4:16774494-16776233 REVERSE LENGTH=368
Length = 367
Score = 338 bits (866), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 170/327 (51%), Positives = 229/327 (70%), Gaps = 8/327 (2%)
Query: 35 TLFPGDGIGPEIAESVKQVFNVAGVPIEWEEHYVGTEVDPRTESFLTWESLESVRRNKVG 94
TL PGDGIGP + +V+QV PI +E++ V E+ S + E +ES+R+NKV
Sbjct: 41 TLIPGDGIGPLVTNAVEQVMEAMHAPIFFEKYDVHGEM-----SRVPPEVMESIRKNKVC 95
Query: 95 LKGPMATPIGKGHRSLNLTLRKELGLYANVRPCNSLPGYKTRYDDVNLVTIRENTEGEYS 154
LKG + TP+G G SLN+ LRKEL L+A++ C +LPG TR+++V++V IRENTEGEY+
Sbjct: 96 LKGGLKTPVGGGVSSLNVQLRKELDLFASLVNCFNLPGLPTRHENVDIVVIRENTEGEYA 155
Query: 155 GLEHQVVRGVVESLKIITRQASLRVAEYAFHYAKTNGRERVSAIHKANIMRKTDGLFLKC 214
GLEH+VV GVVESLK+IT+ S R+A+YAF YA N R++V+A+HKANIM+ DGLFL+
Sbjct: 156 GLEHEVVPGVVESLKVITKFCSERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLES 215
Query: 215 CREVAEKYPEIVYEEVIIDNCCMTLVKNPGLFDVLVMPNLYGDIISDLCAGLIGGLGLTP 274
CREVA+KYP I Y E+I+DNCCM LV P FDV+V PNLYG+++++ AG+ GG G+ P
Sbjct: 216 CREVAKKYPSITYNEIIVDNCCMQLVAKPEQFDVMVTPNLYGNLVANTAAGIAGGTGVMP 275
Query: 275 SCNIGEGGICL---AEAVHGSAPDIAGKNLANPTALMLSAVMMLRHLQFNNQADRIHNAI 331
N+G A A + I +N ANP AL+LS+ MMLRHLQF + ADR+ A+
Sbjct: 276 GGNVGADHAVFEQGASAGNVGKDKIVLENKANPVALLLSSAMMLRHLQFPSFADRLETAV 335
Query: 332 LQTISEGKFRTADLGGKASTSDFTKAV 358
+ I+EGK RT DLGG ++T + AV
Sbjct: 336 KKVIAEGKCRTKDLGGTSTTQEVVDAV 362
>AT4G35650.1 | chr4:16908584-16909973 FORWARD LENGTH=369
Length = 368
Score = 327 bits (837), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 168/327 (51%), Positives = 224/327 (68%), Gaps = 8/327 (2%)
Query: 35 TLFPGDGIGPEIAESVKQVFNVAGVPIEWEEHYVGTEVDPRTESFLTWESLESVRRNKVG 94
TL PGDGIGP + +V+QV P+ +E + V + E E +ESV+RNKV
Sbjct: 42 TLIPGDGIGPLVTGAVEQVMEAMHAPVHFERYEVLGNMRKVPE-----EVIESVKRNKVC 96
Query: 95 LKGPMATPIGKGHRSLNLTLRKELGLYANVRPCNSLPGYKTRYDDVNLVTIRENTEGEYS 154
LKG +ATP+G G SLN+ LRKEL ++A++ C ++PG TR+++V++V IRENTEGEYS
Sbjct: 97 LKGGLATPVGGGVSSLNMQLRKELDIFASLVNCINVPGLVTRHENVDIVVIRENTEGEYS 156
Query: 155 GLEHQVVRGVVESLKIITRQASLRVAEYAFHYAKTNGRERVSAIHKANIMRKTDGLFLKC 214
GLEH+VV GVVESLK+IT+ S R+A YAF YA N R++V+A+HKANIM+ DGLFL+
Sbjct: 157 GLEHEVVPGVVESLKVITKFCSERIARYAFEYAYLNNRKKVTAVHKANIMKLADGLFLES 216
Query: 215 CREVAEKYPEIVYEEVIIDNCCMTLVKNPGLFDVLVMPNLYGDIISDLCAGLIGGLGLTP 274
CREVA+ Y I Y E+I+DNCCM LV P FDV+V PNLYG++I++ AG+ GG G+ P
Sbjct: 217 CREVAKHYSGITYNEIIVDNCCMQLVAKPEQFDVMVTPNLYGNLIANTAAGIAGGTGVMP 276
Query: 275 SCNIG-EGGICLAEAVHGSAPD--IAGKNLANPTALMLSAVMMLRHLQFNNQADRIHNAI 331
N+G E I A G+ + + + ANP AL+LS+ MMLRHL+F ADR+ A+
Sbjct: 277 GGNVGAEHAIFEQGASAGNVGNDKMVEQKKANPVALLLSSAMMLRHLRFPTFADRLETAV 336
Query: 332 LQTISEGKFRTADLGGKASTSDFTKAV 358
Q I EGK+RT DLGG +T + AV
Sbjct: 337 KQVIKEGKYRTKDLGGDCTTQEVVDAV 363
>AT2G17130.1 | chr2:7461062-7462466 REVERSE LENGTH=368
Length = 367
Score = 325 bits (834), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 168/366 (45%), Positives = 238/366 (65%), Gaps = 17/366 (4%)
Query: 3 LRRLLQGSVLPRMAGRAAAAPFSTASGETVRATLFPGDGIGPEIAESVKQVFNVAGVPIE 62
LR + GS ++ R+ G+ TL PGDG+GP + +V+QV P+
Sbjct: 12 LRSIASGS---KIQTRSVTYMPRPGDGKPRPVTLIPGDGVGPLVTNAVQQVMEAMHAPVY 68
Query: 63 WEEHYVGTEVDPRTESFLTWESLESVRRNKVGLKGPMATPIGKGHRSLNLTLRKELGLYA 122
+E V ++ E L ES+++NKV LKG + TP+G G SLN+ LRKEL L+A
Sbjct: 69 FEPFEVHGDMKSLPEGLL-----ESIKKNKVCLKGGLKTPVGGGVSSLNVNLRKELDLFA 123
Query: 123 NVRPCNSLPGYKTRYDDVNLVTIRENTEGEYSGLEHQVVRGVVESLKIITRQASLRVAEY 182
++ C +LPG +R+++V++V IRENTEGEY+GLEH+VV GVVESLK+IT+ S R+A+Y
Sbjct: 124 SLVNCFNLPGLASRHENVDIVVIRENTEGEYAGLEHEVVPGVVESLKVITKFCSERIAKY 183
Query: 183 AFHYAKTNGRERVSAIHKANIMRKTDGLFLKCCREVAEKYPEIVYEEVIIDNCCMTLVKN 242
AF YA N R++V+A+HKANIM+ DGLFL+ C+EVA+KYP I Y E+I+DNCCM LV
Sbjct: 184 AFEYAYLNNRKKVTAVHKANIMKLADGLFLESCQEVAKKYPSIAYNEIIVDNCCMQLVAR 243
Query: 243 PGLFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGICLAEAVHGSAPDIAGKNL- 301
P FDV+V PNLYG+++++ AG+ GG G+ P N+G + G++ GK+
Sbjct: 244 PEQFDVMVTPNLYGNLVANTAAGIAGGTGVMPGGNVGAEYAVFEQ---GASAGNVGKDTT 300
Query: 302 -----ANPTALMLSAVMMLRHLQFNNQADRIHNAILQTISEGKFRTADLGGKASTSDFTK 356
ANP AL+LS+ MMLRHLQF + ADR+ A+ + I+EG RT DLGG ++T +
Sbjct: 301 EEQKNANPVALLLSSAMMLRHLQFPSFADRLETAVKRVIAEGNCRTEDLGGNSTTQEVVD 360
Query: 357 AVCDHI 362
AV ++
Sbjct: 361 AVIANL 366
>AT1G32480.1 | chr1:11741083-11741727 FORWARD LENGTH=215
Length = 214
Score = 172 bits (436), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 91/221 (41%), Positives = 138/221 (62%), Gaps = 13/221 (5%)
Query: 38 PGDGIGPEIAESVKQVFNVAGVPIEWEEHYVGTEVDPRTESFLTWESLESVRRNKVGLKG 97
P I + +V QV + P+ +E + + + + LTWE ++S+R+NKV L G
Sbjct: 4 PVTVIDSNVTNAVHQVMDAMQAPVYFETYIIKG----KNMNHLTWEVVDSIRKNKVCLNG 59
Query: 98 PMATPIGKGHRSLNLTLRKELGLYANVRPCNSLPGYKTRYDDVNLVTIRENTEGEYSGLE 157
+ + G RKEL L+A++ C +L G +R+++V++V IRENTEGEY+G E
Sbjct: 60 RVNNSLCGG-------ARKELDLFASLVDCFNLNGQPSRHENVDIVVIRENTEGEYAGRE 112
Query: 158 HQVVRGVVESLKI-ITRQASLRVAEYAFHYAKTNGRERVSAIHKANIMRK-TDGLFLKCC 215
H+VV GV+ES ++ +T+ S R+A+YAF YA + R++V+A+H K D FL+ C
Sbjct: 113 HEVVPGVIESFQVTMTKFWSDRIAKYAFEYAHFSKRKKVTAVHNNGKYEKLADAFFLESC 172
Query: 216 REVAEKYPEIVYEEVIIDNCCMTLVKNPGLFDVLVMPNLYG 256
+EVA+ YP I Y E+ I+NCC+ LV+ P FDV+V PNLYG
Sbjct: 173 QEVAKMYPNITYNEIGINNCCLQLVEKPERFDVIVTPNLYG 213
>AT5G14200.1 | chr5:4576220-4578111 FORWARD LENGTH=410
Length = 409
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 107/333 (32%), Positives = 173/333 (51%), Gaps = 26/333 (7%)
Query: 36 LFPGDGIGPEIAESVKQVFNVAG----VPIEWEEHYVGTEVDPRTESFLTWESLESVRRN 91
L PGDGIGPE+ K V AG + +++E VG L E+ + + +
Sbjct: 51 LLPGDGIGPEVISVAKNVLQKAGSLEGLEFDFKEMPVGGAALDLVGVPLPEETFTAAKLS 110
Query: 92 KVGLKGPMA-TPIGKGHRSLN-----LTLRKELGLYANVRPCNSLPGY-------KTRYD 138
L G + K + L LR++L ++AN+RP LP K +
Sbjct: 111 DAILLGAIGGYKWDKNEKHLRPEMALFYLRRDLKVFANLRPATVLPQLVDASTLKKEVAE 170
Query: 139 DVNLVTIRENTEGEYSGLEHQVV-----RGVVESLKIITRQASLRVAEYAFHYAKTNGRE 193
V+++ +RE T G Y G + V S +I R+A AF A+ R
Sbjct: 171 GVDMMIVRELTGGIYFGEPRGITINENGEEVGVSTEIYAAHEIDRIARVAFETARKR-RG 229
Query: 194 RVSAIHKANIMRKTDGLFLKCCREVAEKYPEIVYEEVIIDNCCMTLVKNPGLFDVLVMPN 253
++ ++ KAN++ + L+ K +A +YP++ + +DN M L+++P FD +V N
Sbjct: 230 KLCSVDKANVLDASI-LWRKRVTALASEYPDVELSHMYVDNAAMQLIRDPKQFDTIVTNN 288
Query: 254 LYGDIISDLCAGLIGGLGLTPSCNIGEGGICLAEAVHGSAPDIAGKNLANPTALMLSAVM 313
++GDI+SD + + G +G+ PS ++GE G L E +HGSAPDIAG++ ANP A +LSA M
Sbjct: 289 IFGDILSDEASMITGSIGMLPSASLGESGPGLFEPIHGSAPDIAGQDKANPLATILSAAM 348
Query: 314 MLRH-LQFNNQADRIHNAILQTISEGKFRTADL 345
+L++ L A RI +A++ +++G FRT D+
Sbjct: 349 LLKYGLGEEKAAKRIEDAVVDALNKG-FRTGDI 380
>AT1G31180.1 | chr1:11142843-11144617 REVERSE LENGTH=405
Length = 404
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 110/350 (31%), Positives = 179/350 (51%), Gaps = 30/350 (8%)
Query: 19 AAAAPFSTASGETVRATLFPGDGIGPEIAESVKQVFNVAG----VPIEWEEHYVGTEVDP 74
AAA+P + TL PGDGIGPE+ K V AG + +++E G
Sbjct: 35 AAASPVK----KRYNITLLPGDGIGPEVISVAKNVLQKAGFLQGLEFDFQEMPFGGAALD 90
Query: 75 RTESFLTWESLESVRRNKVGLKGPMA-TPIGKGHRSLN-----LTLRKELGLYANVRPCN 128
L E+ + +++ L G + K + L L +R++L ++AN+RP
Sbjct: 91 LVGVPLPEETSTAAKQSDAILLGAIGGYKWDKNEKHLRPEMGLLNIRRDLNVFANLRPAT 150
Query: 129 SLPGY-------KTRYDDVNLVTIRENTEGEYSGLEHQVV-----RGVVESLKIITRQAS 176
LP K V+++ +RE T G Y G + V + +I
Sbjct: 151 VLPQLVDASTLKKEVAQGVDMMIVRELTGGIYFGEPRGITINENGEEVGFNTEIYAAHEI 210
Query: 177 LRVAEYAFHYAKTNGRERVSAIHKANIMRKTDGLFLKCCREVAEKYPEIVYEEVIIDNCC 236
R+A AF A+ R ++ ++ KAN++ + L+ K +A +YP++ + +DN
Sbjct: 211 DRIARVAFETARKR-RGKLCSVDKANVLDASI-LWRKRVTALASEYPDVELSHMYVDNAA 268
Query: 237 MTLVKNPGLFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGICLAEAVHGSAPDI 296
M LV++P FD +V N++GDI+SD + + G +G+ PS ++GE G L E +HGSAPDI
Sbjct: 269 MQLVRDPKQFDTIVTNNIFGDILSDEASMITGSIGMLPSASLGESGPGLFEPIHGSAPDI 328
Query: 297 AGKNLANPTALMLSAVMMLRH-LQFNNQADRIHNAILQTISEGKFRTADL 345
AG++ ANP A +LSA M+L++ L A I +A++ +++G FRT D+
Sbjct: 329 AGQDKANPLATILSAAMLLKYGLGEEKAAKMIEDAVVDALNKG-FRTGDI 377
>AT1G80560.1 | chr1:30287833-30290126 FORWARD LENGTH=406
Length = 405
Score = 151 bits (382), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 106/339 (31%), Positives = 171/339 (50%), Gaps = 36/339 (10%)
Query: 35 TLFPGDGIGPEIAESVKQVFNVAG----VPIEWEEHYVGTEVDPRTESFLTWESLESVRR 90
TL PGDGIGPE+ K V AG V + E +G L E++ + +
Sbjct: 46 TLLPGDGIGPEVVSIAKNVLQQAGSLEGVEFNFREMPIGGAALDLVGVPLPEETISAAKE 105
Query: 91 NKVGLKGPMATPIGKGHRSLN-----------LTLRKELGLYANVRPCNSLPGY------ 133
+ L G + G++ N L +R L ++AN+RP LP
Sbjct: 106 SDAVLLGAIG-----GYKWDNNEKHLRPEKGLLQIRAALKVFANLRPATVLPQLVDASTL 160
Query: 134 -KTRYDDVNLVTIRENTEGEYSGLEHQVVRG-----VVESLKIITRQASLRVAEYAFHYA 187
+ + V+L+ +RE T G Y G + V + ++ R+A AF A
Sbjct: 161 KREVAEGVDLMVVRELTGGIYFGEPRGIKTNENGEEVGFNTEVYAAHEIDRIARVAFETA 220
Query: 188 KTNGRERVSAIHKANIMRKTDGLFLKCCREVAEKYPEIVYEEVIIDNCCMTLVKNPGLFD 247
+ R ++ ++ KAN++ + L+ K +A +YP++ + +DN M LV++P FD
Sbjct: 221 RKR-RGKLCSVDKANVLEASI-LWRKRVTALASEYPDVELSHMYVDNAAMQLVRDPKQFD 278
Query: 248 VLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGICLAEAVHGSAPDIAGKNLANPTAL 307
+V N++GDI+SD + + G +G+ PS ++ + G L E +HGSAPDIAG++ ANP A
Sbjct: 279 TIVTNNIFGDILSDEASMITGSIGMLPSASLSDSGPGLFEPIHGSAPDIAGQDKANPLAT 338
Query: 308 MLSAVMMLRH-LQFNNQADRIHNAILQTISEGKFRTADL 345
+LSA M+L++ L A RI +A+L ++ G FRT D+
Sbjct: 339 ILSAAMLLKYGLGEEKAAKRIEDAVLVALNNG-FRTGDI 376
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.136 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,567,735
Number of extensions: 308742
Number of successful extensions: 685
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 671
Number of HSP's successfully gapped: 9
Length of query: 362
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 262
Effective length of database: 8,364,969
Effective search space: 2191621878
Effective search space used: 2191621878
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 112 (47.8 bits)