BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0268300 Os01g0268300|AK102391
(729 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G04130.1 | chr5:1122084-1128031 REVERSE LENGTH=733 1024 0.0
AT3G10270.1 | chr3:3173805-3179756 REVERSE LENGTH=773 987 0.0
AT5G04110.1 | chr5:1110757-1114112 REVERSE LENGTH=547 255 7e-68
AT3G23890.1 | chr3:8624931-8631106 FORWARD LENGTH=1474 112 1e-24
>AT5G04130.1 | chr5:1122084-1128031 REVERSE LENGTH=733
Length = 732
Score = 1024 bits (2648), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/655 (74%), Positives = 565/655 (86%), Gaps = 1/655 (0%)
Query: 76 ASEAMQEKRVAGEYTAANVQVLEALDGVRTRPGMYIGSTGSRGLHHLVYEILDNAVDEAQ 135
++EA QE + Y++ +QVLE LD VR RPGMYIGSTGSRGLHHLVYEILDNA+DEAQ
Sbjct: 78 STEASQETTTSKGYSSEQIQVLEGLDPVRKRPGMYIGSTGSRGLHHLVYEILDNAIDEAQ 137
Query: 136 AGYATKVDVILHGDNSVSVTDNGRGIPTDIHPQTKKSCVETVLTLMHAGGKFGGSKSGYT 195
AGYA+KVDV+LH D SVSV DNGRGIPTD+HP TKKS +ETVLT++HAGGKFGG+ SGY+
Sbjct: 138 AGYASKVDVVLHADGSVSVVDNGRGIPTDLHPATKKSSLETVLTVLHAGGKFGGTSSGYS 197
Query: 196 XXXXXXXXXXXXXNALSEALEVTVWRDGKEYRQNYSRGKAITMLTSRTLSDESSSRQGTR 255
NALSEALEV+VWRDG E++QNYSRGK IT LT R L ES +GT
Sbjct: 198 VSGGLHGVGLSVVNALSEALEVSVWRDGMEHKQNYSRGKPITTLTCRVLPLESKGTKGTS 257
Query: 256 IRFWPDKHIFTTTMDFDFNTIAGRIRELAFLNPELTIALTKEEDDLQ-VQHNEYCYAGGL 314
IRFWPDK +FTT ++FD NTIAGRIRELAFLNP++TI+L KE+DD + Q++EY +AGGL
Sbjct: 258 IRFWPDKEVFTTAIEFDHNTIAGRIRELAFLNPKVTISLKKEDDDPEKTQYSEYSFAGGL 317
Query: 315 VEYVKWLNTDKKSLHDPIAFRKEMDGITVDVSLQWCSDSYSDTVLGYANSIRTIDGGTHI 374
EYV WLNTDK +HD + FR+E++G TVDV+LQWCSD+YSDT+LGYANSIRTIDGGTHI
Sbjct: 318 TEYVSWLNTDKNPIHDVLGFRREINGATVDVALQWCSDAYSDTMLGYANSIRTIDGGTHI 377
Query: 375 DGLKTSLTRTINNFAKKSKTLKDKDISLSGEHVREGMTCIIAVKVPNPEFEGQTKTRLGN 434
+G+K SLTRT+N AKKSKT+K+KDISLSGEHVREG+TCI++VKVPNPEFEGQTKTRLGN
Sbjct: 378 EGVKASLTRTLNTLAKKSKTVKEKDISLSGEHVREGLTCIVSVKVPNPEFEGQTKTRLGN 437
Query: 435 PEVRRIVEQSVQENLTEYLELHPDVLDSILSKSLNXXXXXXXXXXXXELVRTKSVLKSSS 494
PEVR+IV+QSVQE LTE+LELHPD+L+SI+SKSLN ELVR+KSVLKSSS
Sbjct: 438 PEVRKIVDQSVQEYLTEFLELHPDILESIISKSLNAYKAALAAKRARELVRSKSVLKSSS 497
Query: 495 LPGKLADCASSDPEESEIFIVEGDSAGGSAKQGRDRKFQAILPLRGKILNIERRDEAALY 554
LPGKLADC+S+DPE SEIFIVEGDSAGGSAKQGRDR+FQAILPLRGKILNIER+DEAA+Y
Sbjct: 498 LPGKLADCSSTDPEVSEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIERKDEAAMY 557
Query: 555 KNEEIQNLIVALGLGVKGEDFNKEALRYHKIVILTDADVDGAHIRTLLLTFFFRYQKALF 614
KNEEIQNLI+ LGLGVKGEDF KE LRYHKI+ILTDADVDGAHIRTLLLTFFFRYQ+ALF
Sbjct: 558 KNEEIQNLILGLGLGVKGEDFKKENLRYHKIIILTDADVDGAHIRTLLLTFFFRYQRALF 617
Query: 615 DEGCIYVGVPPLYKVERGKQAHYCYDDADLKELVNTFPTNASYHIQRFKGLGEMMPAQLW 674
D GCIYVGVPPL+KVERGK A YCYDDADLK++ + FP NASY+IQRFKGLGEMMP QLW
Sbjct: 618 DAGCIYVGVPPLFKVERGKNAQYCYDDADLKKITSNFPANASYNIQRFKGLGEMMPEQLW 677
Query: 675 ETTMDPERRMLKQLKVEDAAEANVVFSSLMGTRVDVRKQLIQNAASMVNLEHLDI 729
ETTM+PE R+LKQL V+D AEAN+ FSSLMG RVDVRK+LI+NAA+ +NL+ LDI
Sbjct: 678 ETTMNPETRILKQLVVDDIAEANMTFSSLMGARVDVRKELIKNAATRINLQRLDI 732
>AT3G10270.1 | chr3:3173805-3179756 REVERSE LENGTH=773
Length = 772
Score = 987 bits (2552), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 495/700 (70%), Positives = 575/700 (82%), Gaps = 35/700 (5%)
Query: 63 NGVAVRAFMASTAASEAMQEKRVAGEYTAANVQVLEALDGVRTRPGMYIGSTGSRGLHHL 122
N V+ ++FM+ST E++QE + +Y++ ++QVLE LD VR RPGMYIGSTGSRGLHHL
Sbjct: 75 NAVSPKSFMSSTM--ESLQESSTSKDYSSEHIQVLEGLDPVRKRPGMYIGSTGSRGLHHL 132
Query: 123 VYEILDNAVDEAQAGYATKVDVILHGDNSVSVTDNGRGIPTDIHPQTKKSCVETVLTLMH 182
VYEILDNA+DEAQAG+A+K+DV+LH D+SVS++DNGRGIPTD+HP T KS +ETVLT++H
Sbjct: 133 VYEILDNAIDEAQAGFASKIDVVLHSDDSVSISDNGRGIPTDLHPATGKSSLETVLTVLH 192
Query: 183 AGGKFGGSKSGYTXXXXXXXXXXXXXNALSEALEVTVWRDGKEYRQNYSRGKAITMLTSR 242
AGGKFGG SGY+ NALSEALEV V RDG E++Q YSRGK +T LT
Sbjct: 193 AGGKFGGKSSGYSVSGGLHGVGLSVVNALSEALEVIVRRDGMEFQQKYSRGKPVTTLTCH 252
Query: 243 TLSDESSSRQGTRIRFWPDKHIFTTTMDFDFNTIAGRIRELAFLNPELTIALTKEEDDLQ 302
L ES QGT IRFWPDK +FTT + FD NTIAGRIRELAFLNP++TI+L KE+DD +
Sbjct: 253 VLPPESRGTQGTCIRFWPDKEVFTTAIQFDHNTIAGRIRELAFLNPKVTISLKKEDDDPE 312
Query: 303 VQ-HNEYCYAGGLVEYVKWLNTDKKSLHDPIAFRKEMDGITVDVSLQWCSDSYSDTVLGY 361
++EY YAGGL EYV WLNTDKK LHD + FRKE++G TVDVSLQWCSD+YSDT+LGY
Sbjct: 313 RDVYSEYFYAGGLTEYVSWLNTDKKPLHDVLGFRKEINGSTVDVSLQWCSDAYSDTMLGY 372
Query: 362 ANSIRTIDGGTHIDGLKTSLTRTINNFAKKSKTLK------------------------- 396
ANSIRTIDGGTHI+G+K SLTRT+N+ AKK K +K
Sbjct: 373 ANSIRTIDGGTHIEGVKASLTRTLNSLAKKLKVIKVKGYIIYSSPWIETKFKYSSALKRH 432
Query: 397 -------DKDISLSGEHVREGMTCIIAVKVPNPEFEGQTKTRLGNPEVRRIVEQSVQENL 449
+KDISLSGEHVREG+TCI++VKVPNPEFEGQTKTRLGNPEVR+IV+QSVQE L
Sbjct: 433 ALRTINNEKDISLSGEHVREGLTCIVSVKVPNPEFEGQTKTRLGNPEVRKIVDQSVQEYL 492
Query: 450 TEYLELHPDVLDSILSKSLNXXXXXXXXXXXXELVRTKSVLKSSSLPGKLADCASSDPEE 509
TEYLELHPDVL+SI+SKSLN ELVR+KSVLKSSSLPGKLADC+S+DP E
Sbjct: 493 TEYLELHPDVLESIISKSLNAYKAALAAKRARELVRSKSVLKSSSLPGKLADCSSTDPAE 552
Query: 510 SEIFIVEGDSAGGSAKQGRDRKFQAILPLRGKILNIERRDEAALYKNEEIQNLIVALGLG 569
SEIFIVEGDSAGGSAKQGRDR+FQAILPLRGKILNIER+DEAA+YKNEEIQNLI+ LGLG
Sbjct: 553 SEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIERKDEAAMYKNEEIQNLILGLGLG 612
Query: 570 VKGEDFNKEALRYHKIVILTDADVDGAHIRTLLLTFFFRYQKALFDEGCIYVGVPPLYKV 629
VKGEDFNKE LRYHKI+ILTDADVDGAHIRTLLLTFFFRYQ+ALFD GCIYVGVPPL+KV
Sbjct: 613 VKGEDFNKENLRYHKIIILTDADVDGAHIRTLLLTFFFRYQRALFDAGCIYVGVPPLFKV 672
Query: 630 ERGKQAHYCYDDADLKELVNTFPTNASYHIQRFKGLGEMMPAQLWETTMDPERRMLKQLK 689
ERGKQAHYCYDDA LK++ +FP NASY+IQRFKGLGEMMPAQLWETTM+P+ R+LKQL
Sbjct: 673 ERGKQAHYCYDDAALKKITASFPGNASYNIQRFKGLGEMMPAQLWETTMNPDTRILKQLV 732
Query: 690 VEDAAEANVVFSSLMGTRVDVRKQLIQNAASMVNLEHLDI 729
V+DAAE N+VFSSLMG RVDVRK+LI++AA+ +NLE+LDI
Sbjct: 733 VDDAAETNMVFSSLMGARVDVRKELIKSAATRMNLENLDI 772
>AT5G04110.1 | chr5:1110757-1114112 REVERSE LENGTH=547
Length = 546
Score = 255 bits (651), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 130/251 (51%), Positives = 174/251 (69%), Gaps = 10/251 (3%)
Query: 286 LNPELTIALTKEEDDLQVQHNEYCYAGGLVEYVKWLNTDKKSLHDPIAFRKEMDGITVDV 345
L ++T++L E++D + EY YA GL E+V WLN DKK LHD + FRKE++G T+++
Sbjct: 17 LRVQITVSLEMEDND---PNKEYLYAKGLSEFVTWLNADKKPLHDVLGFRKEINGTTINI 73
Query: 346 SLQWCSDSYSDTVLGYANSIRTIDGGTHIDGLKTSLTRTINNFAKKSKTLKDKDISLSGE 405
+LQWC D YS+ +LGYAN IRT+DGGT+IDG+K S+TRT+N+ +KSK ++DKDI + E
Sbjct: 74 ALQWCVDGYSNKILGYANGIRTMDGGTYIDGVKASITRTLNSLVEKSKLVEDKDIIFTEE 133
Query: 406 HVREGMTCIIAVKVPNPEFEGQTKTRLGNPEVRRIVEQSVQENLTEYLELHPDVLDSILS 465
HV EG+TCI++V VP PEFEGQT+ RLGNP VR IV+QSVQE L E ELHPDV +SI+S
Sbjct: 134 HVMEGLTCIVSVIVPKPEFEGQTQ-RLGNPNVREIVDQSVQECLMESFELHPDVFESIMS 192
Query: 466 KSLNXXXXXXXXXXXXELVRTKS---VLKSSSLPGKLADCASSDPEESEIFIVEGDSAGG 522
KS N ++ ++S V S+P KL + +S E SE FI G S+GG
Sbjct: 193 KSYNAYKTDLAVKRARDVYSSESVAMVCAIESIPMKLTNSSS---ETSETFIGRGVSSGG 249
Query: 523 SAKQGRDRKFQ 533
+AK DR F+
Sbjct: 250 AAKHDSDRCFK 260
>AT3G23890.1 | chr3:8624931-8631106 FORWARD LENGTH=1474
Length = 1473
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 165/704 (23%), Positives = 277/704 (39%), Gaps = 100/704 (14%)
Query: 72 ASTAASEAMQEKRVAGEYTAANVQVLEALDGVRTRPGMYIGS------------------ 113
A+ A + A G+ Q L+ + RP YIGS
Sbjct: 13 ANVAKAPAKSRAAAGGKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQTLWVYEKDEMVQ 72
Query: 114 ---TGSRGLHHLVYEILDNAVDEAQA-GYATKVDVILHGD-NSVSVTDNGRGIPTDIHPQ 168
T GL+ + EIL NA D Q V V++ + N +SV ++G G+P +IH +
Sbjct: 73 RPVTYVPGLYKIFDEILVNAADNKQRDAKMDSVQVVIDVEQNLISVCNSGAGVPVEIHQE 132
Query: 169 TKKSCVETVLTLMHAGGKFG-------GSKSGYTXXXXXXXXXXXXXNALSEA--LEVTV 219
E + + + G ++GY N S +E
Sbjct: 133 EGIYVPEMIFGHLLTSSNYDDNVKKTTGGRNGY---------GAKLTNIFSTEFIIETAD 183
Query: 220 WRDGKEYRQNYSRGKAITMLTSRTLSDESSSRQGTRIRFWPDKHIFTTTM--DFDFNTIA 277
+ K+Y+Q + + + ++ + S T++ F PD F T D ++
Sbjct: 184 GKRLKKYKQVFENN--MGKKSEPVITKCNKSENWTKVTFKPDLKKFNMTELEDDVVALMS 241
Query: 278 GRIRELA-FLNPELTIALTKEEDDLQVQHNEYCYAGGLVEYVK-WLNTDKKS-LHDPIAF 334
R+ ++A L + + L ++ ++ +YV +L+ KS DP+
Sbjct: 242 KRVFDIAGCLGKSVKVELNGKQIPVK----------SFTDYVDLYLSAANKSRTEDPLPR 291
Query: 335 RKEMDGITVDVSLQWCSDSYSDTVLGYANSIRTIDGGTHIDGLKTSLTRTINNFAKKSKT 394
E +V + + + + NSI TI GGTH+D +T I N +
Sbjct: 292 LTEKVNDRWEVCVSLSEGQFQQ--VSFVNSIATIKGGTHVD----YVTSQITNHIVAAVN 345
Query: 395 LKDKDISLSGEHVREGMTCIIAVKVPNPEFEGQTKTRLGNPEVRRIVEQSVQENLTEYLE 454
K+K+ ++ +V+ + + + NP F+ QTK L +R Q + E
Sbjct: 346 KKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETL---TLR-------QSSFGSKCE 395
Query: 455 LHPDVLDSI-LSKSLNXXXXXXXXXXXXELVRTKSVLKSSSLPGKLADCASSDPEESEI- 512
L D L + S + +L ++ L KL D A + + S +
Sbjct: 396 LSEDFLKKVGKSGVVENLLSWADFKQNKDLKKSDGAKTGRVLVEKLDDAAEAGGKNSRLC 455
Query: 513 --FIVEGDSAGGSAKQGRD---RKFQAILPLRGKILNIERRDEAALYKNEEIQNLIVALG 567
+ EGDSA A GR + + PLRGK+LN+ + N+EI+NL LG
Sbjct: 456 TLILTEGDSAKSLALAGRSVLGNNYCGVFPLRGKLLNVREASTTQITNNKEIENLKKILG 515
Query: 568 LGVKGEDFNKEALRYHKIVILTDADVDGAHIRTLLLTFFFRYQKALFDEGCIYVG-VPPL 626
L + N +LRY +++I+TD D DG+HI+ LL+ F + +L V + P+
Sbjct: 516 LKQNMKYENVNSLRYGQMMIMTDQDHDGSHIKGLLINFIHSFWPSLLQVPSFLVEFITPI 575
Query: 627 YKVERG--KQAHYCYDDADLKELVNTFPTNAS-YHIQRFKGLGEMMPAQ----------- 672
K R K+ Y + +E + NA+ + I+ +KGLG +
Sbjct: 576 VKATRKGTKKVLSFYSMPEYEEWKESLKGNATGWDIKYYKGLGTSTAEEGKEYFSNLGLH 635
Query: 673 ----LWETTMDPERRMLKQLKVEDAAEANVVFSSLMGTRVDVRK 712
+WE D E L K + A N + S + G +D R+
Sbjct: 636 KKDFVWEDEQDGEAIELAFSKKKIEARKNWLSSYVPGNHLDQRQ 679
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.316 0.133 0.381
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 13,341,789
Number of extensions: 550359
Number of successful extensions: 1365
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 1356
Number of HSP's successfully gapped: 4
Length of query: 729
Length of database: 11,106,569
Length adjustment: 106
Effective length of query: 623
Effective length of database: 8,200,473
Effective search space: 5108894679
Effective search space used: 5108894679
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 115 (48.9 bits)