BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0261100 Os01g0261100|AK102361
(431 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G75400.1 | chr1:28297609-28299464 FORWARD LENGTH=456 211 7e-55
AT1G19680.1 | chr1:6805909-6807682 FORWARD LENGTH=445 194 1e-49
AT2G21500.2 | chr2:9207965-9209575 REVERSE LENGTH=422 148 6e-36
AT4G39140.1 | chr4:18229637-18231282 REVERSE LENGTH=430 144 6e-35
AT1G14180.1 | chr1:4847828-4848970 FORWARD LENGTH=349 50 3e-06
>AT1G75400.1 | chr1:28297609-28299464 FORWARD LENGTH=456
Length = 455
Score = 211 bits (536), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 169/455 (37%), Positives = 225/455 (49%), Gaps = 45/455 (9%)
Query: 1 MGANCCIAAKERP-QPCVTPIEVSAFRNVRHSPSWSFRWDNRTHIEDIMEMPALFSNH-- 57
MG+ CC+A K+R P P S RN SP WSFR DNR + D +E +S +
Sbjct: 1 MGSVCCVAVKDRKVPPSGGPASSSVHRNSACSPQWSFRRDNRRRVADEIEGSPYYSPYVA 60
Query: 58 SSGSIRPETKSGSIAPTDGFSNGGSPSDMFNKLKCHKSDRKRESSKIARSDLRAGRSTTS 117
S G + GS T S GG+P D S K A ++ ST S
Sbjct: 61 SRGISMDKMSLGSERGT--LSEGGTPPDGHLGTPA--------SQKSATPEM----STNS 106
Query: 118 NSSPEAKLSRKSLDTVSV-----------ASDSKMSISVPSTPPAISRADPSSSSRGHSL 166
P + S S D + V ++ SK S PS P +S SS+ L
Sbjct: 107 MVPPSSGSSLASSDLIEVKNLVDSPGIVPSAQSKPLFSTPSLPNPVSDL---SSAHTRLL 163
Query: 167 PTDADSMRKARRSPGYQLYRQVSDSKIPSLRS-LNEGASPEGRPSSSMLSVCSNDLSAVG 225
P + R+ARRSPG+QL+RQVSDS+I L+S +N + EGR SS +LS CSND +
Sbjct: 164 PPKSTPSRRARRSPGHQLFRQVSDSQILGLKSPINNYSISEGR-SSFVLSTCSNDFATGS 222
Query: 226 SHGESSDGWSMRTFSEMVASSQRERWSVDSELLGSVSSKMTRSNASNNPTTHSPDQEVXX 285
+ S GWSM TFSE+VA SQR+RWS DSE LGS K++ ++ + + DQ+V
Sbjct: 223 QYASSEGGWSMNTFSELVAYSQRDRWSFDSEHLGSGRRKLSGGSSRFSFSPSVVDQQVCG 282
Query: 286 XXXXXXXERSTWNAQELAVVAVLLCGHVYHADCLDSLTAEADKYDPPCPVCTHGEKCTVK 345
ERS+ EL + AVL CGHVYHA+CL+++T + +KYDP CP+CT GEK K
Sbjct: 283 ACSKLLTERSSIATFELPIAAVLACGHVYHAECLETMTTDIEKYDPACPICTIGEKRVAK 342
Query: 346 L------FGKLESKTKNKIPKNVIVDVNLDGSSKH---QKESRREP---RLGTSSSLKGS 393
+ + K KN +VD + QK +RE +L S S K S
Sbjct: 343 ITRKALKAEAEAKAKQYKRCKNRVVDSYGESECDEFVFQKMGKREGKALKLEASCSSKSS 402
Query: 394 FSRPFLRRHFXXXXXXXXXXXXXXXARKKGFWARH 428
++ FL+ HF A KKGFW+RH
Sbjct: 403 SNKSFLKWHFASISSKWNKPSSKDSALKKGFWSRH 437
>AT1G19680.1 | chr1:6805909-6807682 FORWARD LENGTH=445
Length = 444
Score = 194 bits (492), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 161/443 (36%), Positives = 226/443 (51%), Gaps = 33/443 (7%)
Query: 1 MGANCCIAAKERPQPCVTPIEVSAFRNVRHSPSWSFRWDNRTHIEDIMEMPALFSNHSSG 60
MG+ CC+AAK+R P A N SPSWSFR DNR + D ++ SNH+ G
Sbjct: 1 MGSVCCVAAKDRNVPS------GAIDNSVCSPSWSFRRDNRRRVADEIKDS---SNHNVG 51
Query: 61 SIRPETKSGSIAPTDGFSNG--GSPSDMFNKLKCHKS-DRKRESSKIARSDLRAGRSTTS 117
S + S+ G G S + L KS D + ++ + + L AG S
Sbjct: 52 SRGIDIDKLSL----GLERGPPSSETGGLATLGSQKSADSEMGTASMVTAPL-AGTSLAI 106
Query: 118 NSSPEAKL-SRKSLDTVSVASDSKMSISVPSTPPAISRADPSSSSRGHSLPTDADSMRKA 176
S + L S ++ ++ S + SV P + + S+ HSLP + R+A
Sbjct: 107 RSPSDVSLASPVRVEVKNIVDSSDIVSSVLPNPSSSTSVSDLPSAHTHSLPPRSTPSRRA 166
Query: 177 RRSPGYQLYRQVSDSKIPSLRSLNEGASPEGRPSSSMLSVCSNDLSAVGSHGESSDG-WS 235
R SPG QL+RQVSDS+ L+S N ++ EGR SS +LS CSND +A GSH SS+G WS
Sbjct: 167 RGSPGQQLFRQVSDSQTLGLKSPNNYSTSEGR-SSFVLSTCSND-TATGSHFASSEGGWS 224
Query: 236 MRTFSEMVASSQRERWSVDSELLGSVSSKMTRSNASNNPTTHSPDQEVXXXXXXXXXERS 295
+ F E+VA SQRERWS D+E LGS +++ ++S + S DQ+ ERS
Sbjct: 225 INAFCELVAQSQRERWSFDNEHLGSGRRRLSGCSSSRFSCSPSVDQQTCGRCSKLLTERS 284
Query: 296 TWNAQELAVVAVLLCGHVYHADCLDSLTAEADKYDPPCPVCTHGEKCTV---KLFGKLES 352
+L + AVL CGHVYHA CL+++T E +KYDP CP+CT + + L + E
Sbjct: 285 PVARFDLPIPAVLACGHVYHAACLETMTNETEKYDPTCPICTETQVTKLSRKALKAEAEL 344
Query: 353 K-TKNKIPKNVIVDVNLDGSSK---HQKESRREP---RLGTSSSLKGSFSRPFLRRHFXX 405
K T K KN +VD + + Q +RE ++ SS+ KGS S+ F++ HF
Sbjct: 345 KATSYKRCKNRVVDSYVRSECEDLMFQNLGKREGKGLKMDPSSNTKGSTSKSFMKWHFGS 404
Query: 406 XXXXXXXXXXXXXARKKGFWARH 428
KK FW+RH
Sbjct: 405 VSTKWSKARDSTS--KKSFWSRH 425
>AT2G21500.2 | chr2:9207965-9209575 REVERSE LENGTH=422
Length = 421
Score = 148 bits (373), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 140/423 (33%), Positives = 206/423 (48%), Gaps = 56/423 (13%)
Query: 1 MGANCCIAAKER-PQPCVTPIEVSAFRNVRHSPSWSFRWDNRT-HIEDIMEMPALFSNHS 58
MG CC+A +++ P + +E NVR+SP+WSFRWDNR + +L S+
Sbjct: 1 MGNACCVATRDKMVVPNTSAVENFQRNNVRYSPNWSFRWDNRGGRVAGEETSVSLLSDRI 60
Query: 59 SGSIRPETKSGSIAPTDGFSNGGSPSDMFNKLKCHKSDRKRES-SKIARSDLRAGRSTTS 117
S + + KS T S+ GSP D F KS +S S+IA D S
Sbjct: 61 SRNDVSDVKS----ETALVSSQGSPLDNFQTQSWQKSPASDQSFSRIASID--------S 108
Query: 118 NSSPEAKLSRKSLDTVSVASDSKMSISVPSTPPAISRADPSSSSRGHSLPTDADSMRKAR 177
S + + S D S +K+S+S+ S P + S + SS S LP S + +
Sbjct: 109 VSEQITQKTNDSTDPTYYPSPAKLSLSLASQPSSFSVSPLSSQSH---LPMPPASSSQLK 165
Query: 178 RSPGYQLYRQVSDSKIPSLRSLNEGASPEGRPSSSMLSVCSNDLSAVGSHGESSDGWSMR 237
+P +L +QVS +I S + ++ E R +G+ +S DGWSM+
Sbjct: 166 LTPPPRLSKQVSYGQIFGFTSPSRSSATEER---------------LGNESQS-DGWSMQ 209
Query: 238 TFSEMVASSQRERWSVDSELLGSVSSKMTRSNASNNPTTHSPDQE------VXXXXXXXX 291
FSEM+A S+RE S D+E G + R N + S DQ+
Sbjct: 210 AFSEMMAYSRRESCSYDNECFG-----LRRDKIDNLGSRKSNDQQNCGACSRSLSEKSLL 264
Query: 292 XERSTWNAQELAVVAVLLCGHVYHADCLDSLTAEADKYDPPCPVCTHGEKCTVKLFGK-- 349
+ + EL+V A+L CGHVYH++CL+ +T E DK+DP CP+CT GEK T KL K
Sbjct: 265 SSQKIFATNELSVAAILACGHVYHSECLEQMTPEIDKFDPSCPICTLGEKKTFKLSEKAL 324
Query: 350 ---LESKTK-NKIPKNVIVDVN--LDGSSKHQKE---SRREPRLGTSSSLKGSFSRPFLR 400
LE K + NK +N +VD + + ++ H+ + P+L +SSSL+ +PFL
Sbjct: 325 KADLEMKARHNKRLRNRVVDSDEFVKFNNNHEAAVGYKGKTPKLISSSSLRSYSPKPFLA 384
Query: 401 RHF 403
RHF
Sbjct: 385 RHF 387
>AT4G39140.1 | chr4:18229637-18231282 REVERSE LENGTH=430
Length = 429
Score = 144 bits (364), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 144/455 (31%), Positives = 217/455 (47%), Gaps = 63/455 (13%)
Query: 1 MGANCCIAAKER-PQPCVTPIEVSAFRNVRHSPSWSFRWDNRTHIEDIMEMPALFSNHSS 59
MG CC+AA+++ P + E N+RHSPSWSFRWDNR + + S+ S
Sbjct: 1 MGNACCVAARDKMVVPNSSAGENLQRSNIRHSPSWSFRWDNRGRVAGEETSLSWLSDGIS 60
Query: 60 GSIRPETKSGSIAPTDGFSNGGSPSDMFNKLKCHKSDRKRESSKIARSDLRAGRSTTSNS 119
+ E K S S+ GSP D F R + K SDL R+++ N+
Sbjct: 61 RNDGSEIKFESAF----VSSEGSPLDSF---------RTQTLQKSPASDLSFPRNSSMNT 107
Query: 120 SPEAKLSRKSLDTVSVA----SDSKMSISVPSTPPAISRADPSSSSRGHSLPTDADSMRK 175
E K +++ T S A S +++S+S+ S P + + SS S H P + +++
Sbjct: 108 VFEQK---ENVSTESAAPSYLSPAQLSLSLASQPSSFPTSPLSSQSYLH--PASSSTLKL 162
Query: 176 ARRSPGYQLYRQVSDSKIPSLRSLNEGASPEGRPSSSMLSVCSNDLSAVGSHGESSDGWS 235
+ +L +QVSD +I SL+ ++ E R + D S G S+GWS
Sbjct: 163 TQHP---RLSKQVSDGQIYGQNSLSRSSATEERQGTPT----RYDSSQSGP----SEGWS 211
Query: 236 MRTFSEMVASSQRERW----SVDSELLGSVSSKMTRSNASNNPTTHSPDQEVXXXXXXXX 291
++ FSEM++SS+ + + D++ G K+ + N + H Q
Sbjct: 212 LQAFSEMMSSSRSNKALSYDNYDNDCFGLQRDKI--DHHGNRMSKH--QQHTCGACSRPL 267
Query: 292 XERSTWNAQ------ELAVVAVLLCGHVYHADCLDSLTAEADKYDPPCPVCTHGEKCTVK 345
E+S W++Q EL+V A+L CGHVYH +CL+ +T E DK+DP CP+CT GEK T K
Sbjct: 268 SEKSLWSSQKIFMTNELSVSAILACGHVYHGECLEQMTPEIDKFDPSCPICTMGEKKTAK 327
Query: 346 LFG---KLESKTK---NKIPKNVIVD--------VNLDGSSKHQKESRREPRLGTSSSLK 391
L K+E K NK +N ++D V D S + + + PRL +SSS K
Sbjct: 328 LSEKALKVEMDLKARHNKRLRNRVLDSDFDCDDFVMFDHSHRTAAAASKSPRLVSSSSAK 387
Query: 392 GSFSRPFLRRHFXXXXXXXXXX-XXXXXARKKGFW 425
++PFL RHF +KKGF+
Sbjct: 388 SYSAKPFLARHFSFGSRSNYKSPKENLPVKKKGFF 422
>AT1G14180.1 | chr1:4847828-4848970 FORWARD LENGTH=349
Length = 348
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 294 RSTWNAQELAVVAVLLCGHVYHADCLDSLTAEADKYDPPCPVCTHGE 340
RS +++ V VL C HV+H +CLD T + + DP CP+CT E
Sbjct: 201 RSIVRNRDMPVTGVLSCQHVFHVECLDQSTPKIQRNDPLCPICTKQE 247
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.311 0.124 0.368
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 9,379,022
Number of extensions: 388968
Number of successful extensions: 1523
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 1509
Number of HSP's successfully gapped: 5
Length of query: 431
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 330
Effective length of database: 8,337,553
Effective search space: 2751392490
Effective search space used: 2751392490
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 113 (48.1 bits)