BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0255000 Os01g0255000|AK109484
(322 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G02340.1 | chr4:1035722-1037403 FORWARD LENGTH=325 396 e-111
AT3G05600.1 | chr3:1623485-1624704 REVERSE LENGTH=332 361 e-100
AT4G15960.1 | chr4:9045763-9047199 REVERSE LENGTH=376 351 3e-97
AT3G51000.1 | chr3:18945258-18946499 REVERSE LENGTH=324 329 1e-90
AT2G26740.1 | chr2:11393148-11394257 REVERSE LENGTH=322 326 1e-89
AT2G26750.1 | chr2:11395971-11397085 REVERSE LENGTH=321 317 4e-87
AT4G15955.3 | chr4:9043872-9045544 REVERSE LENGTH=305 306 6e-84
AT4G12830.1 | chr4:7531189-7533327 FORWARD LENGTH=394 60 1e-09
AT4G33180.1 | chr4:16000282-16002055 FORWARD LENGTH=308 60 2e-09
>AT4G02340.1 | chr4:1035722-1037403 FORWARD LENGTH=325
Length = 324
Score = 396 bits (1018), Expect = e-111, Method: Compositional matrix adjust.
Identities = 184/318 (57%), Positives = 236/318 (74%), Gaps = 4/318 (1%)
Query: 5 EVRHRTVEVASGVRLHVAEAGPEDGPAVLLVHGFPELWYSWRHQMRALAARGFRAVAPDL 64
++ H T+ +G+ +HVA G GP +L VHGFP+LWYSWRHQ+ + AA G+RA+APDL
Sbjct: 3 KIEHTTIS-TNGINMHVASIG--SGPVILFVHGFPDLWYSWRHQLVSFAALGYRAIAPDL 59
Query: 65 RGYGDSDAPPGRDSYTVLHLVGDLVALIADVGQPRVFVAAHDWGAAVAWQLCLLRPDLVT 124
RGYGDSDAPP R+SYT+LH+VGDLV L+ +G RVF+ HDWGA VAW LC++RPD V
Sbjct: 60 RGYGDSDAPPSRESYTILHIVGDLVGLLDSLGVDRVFLVGHDWGAIVAWWLCMIRPDRVN 119
Query: 125 AFVALSVEYHPRNPTRSPVQTLRAVCGDGHYICFFQKPGVAEAEFGRGDIKCLLKKFYGM 184
A V SV ++PRNP+ PV RA+ GD +YIC FQ+PG E +F + D K L+ +F+
Sbjct: 120 ALVNTSVVFNPRNPSVKPVDAFRALFGDDYYICRFQEPGEIEEDFAQVDTKKLITRFFTS 179
Query: 185 RKAAPLIIPPGKTLFDSIDSDGTCPAWLSEEDISYYAEKFEKTGFTGGLNYYRCIDLNWE 244
R P I P F + + PAWL+E+D+ +Y +KF + GFTGGLNYYR ++L+WE
Sbjct: 180 RNPRPPCI-PKSVGFRGLPDPPSLPAWLTEQDVRFYGDKFSQKGFTGGLNYYRALNLSWE 238
Query: 245 LTAPWTGVPIKVPTKFIVGDQDLTYNIPGVKDYIHKGGLKACVPNLEDVVIMEGVAHFIN 304
LTAPWTG+ IKVP KFIVGD D+TYNIPG K+YIH+GGLK VP L++VV+MEGV HF++
Sbjct: 239 LTAPWTGLQIKVPVKFIVGDLDITYNIPGTKEYIHEGGLKKHVPFLQEVVVMEGVGHFLH 298
Query: 305 QEKPDEVSDHICGFFSKF 322
QEKPDEV+DHI GFF KF
Sbjct: 299 QEKPDEVTDHIYGFFKKF 316
>AT3G05600.1 | chr3:1623485-1624704 REVERSE LENGTH=332
Length = 331
Score = 361 bits (927), Expect = e-100, Method: Compositional matrix adjust.
Identities = 167/322 (51%), Positives = 218/322 (67%), Gaps = 6/322 (1%)
Query: 6 VRHRTVEVASGVRLHVAEAGPEDGPAVLLVHGFPELWYSWRHQMRALAARGFRAVAPDLR 65
+ HR V V +G+ +H+AE GP++GP VLL+HGFP+LWY+WRHQ+ L++ G+RAVAPDLR
Sbjct: 4 IDHRMVSV-NGITMHIAEKGPKEGPVVLLLHGFPDLWYTWRHQISGLSSLGYRAVAPDLR 62
Query: 66 GYGDSDAPPGRDSYTVLHLVGDLVALIADV--GQPRVFVAAHDWGAAVAWQLCLLRPDLV 123
GYGDSD+P YT L++VGDLVAL+ V Q +VF+ HDWGA + W LCL RP+ +
Sbjct: 63 GYGDSDSPESFSEYTCLNVVGDLVALLDSVAGNQEKVFLVGHDWGAIIGWFLCLFRPEKI 122
Query: 124 TAFVALSVEYHPRNPTRSPVQTLRAVCGDGHYICFFQKPGVAEAEFGRGDIKCLLKKFYG 183
FV LSV Y RNP PVQ +AV GD +YIC FQ+PG E E D + L+ +
Sbjct: 123 NGFVCLSVPYRSRNPKVKPVQGFKAVFGDDYYICRFQEPGKIEGEIASADPRIFLRNLFT 182
Query: 184 MRKAAPLIIPPGKTLFDSIDSDGT---CPAWLSEEDISYYAEKFEKTGFTGGLNYYRCID 240
R P I+P + + + P W S++D+ +Y KFEK GFTGGLNYYR +D
Sbjct: 183 GRTLGPPILPKDNPFGEKPNPNSENIELPEWFSKKDLDFYVSKFEKAGFTGGLNYYRAMD 242
Query: 241 LNWELTAPWTGVPIKVPTKFIVGDQDLTYNIPGVKDYIHKGGLKACVPNLEDVVIMEGVA 300
LNWELTAPWTG I+VP KF+ GD D+ Y PG+K+YIH GG A VP L+++V++E
Sbjct: 243 LNWELTAPWTGAKIQVPVKFMTGDFDMVYTTPGMKEYIHGGGFAADVPTLQEIVVIEDAG 302
Query: 301 HFINQEKPDEVSDHICGFFSKF 322
HF+NQEKP EV+ HI FF+K
Sbjct: 303 HFVNQEKPQEVTAHINDFFTKL 324
>AT4G15960.1 | chr4:9045763-9047199 REVERSE LENGTH=376
Length = 375
Score = 351 bits (900), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 167/322 (51%), Positives = 222/322 (68%), Gaps = 6/322 (1%)
Query: 6 VRHRTVEVASGVRLHVAE---AGPEDGPAVLLVHGFPELWYSWRHQMRALAARGFRAVAP 62
V H+T++V +G+ +HVAE +G + P +L +HGFPELWY+WRHQM AL++ G+R +AP
Sbjct: 54 VEHKTLKV-NGINMHVAEKPGSGSGEDPIILFLHGFPELWYTWRHQMVALSSLGYRTIAP 112
Query: 63 DLRGYGDSDAPPGRDSYTVLHLVGDLVALIADV--GQPRVFVAAHDWGAAVAWQLCLLRP 120
DLRGYGD++AP + YT L++ GD+VALI V G V V HDWGA +AWQLC RP
Sbjct: 113 DLRGYGDTEAPEKVEDYTYLNVDGDVVALIDAVTGGDKAVSVVGHDWGAMIAWQLCQYRP 172
Query: 121 DLVTAFVALSVEYHPRNPTRSPVQTLRAVCGDGHYICFFQKPGVAEAEFGRGDIKCLLKK 180
+ V A V +SV + PRNP R PV TLR V GD +Y+C FQK G E EF + + +LK+
Sbjct: 173 EKVKALVNMSVLFSPRNPVRVPVPTLRHVFGDDYYVCRFQKAGEIETEFKKLGTENVLKE 232
Query: 181 FYGMRKAAPLIIPPGKTLFDSIDSDGTCPAWLSEEDISYYAEKFEKTGFTGGLNYYRCID 240
F + PL +P K S ++ P WL++ED+ YY K+E GFTG +NYYR ID
Sbjct: 233 FLTYKTPGPLNLPKDKYFKRSENAASALPLWLTQEDLDYYVTKYENKGFTGPINYYRNID 292
Query: 241 LNWELTAPWTGVPIKVPTKFIVGDQDLTYNIPGVKDYIHKGGLKACVPNLEDVVIMEGVA 300
NWELTAPWTG I+VP KFI+GDQDLTYN PG K+YI+ GG K VP L++ V+++G+
Sbjct: 293 RNWELTAPWTGAKIRVPVKFIIGDQDLTYNFPGAKEYINGGGFKRDVPLLDETVVLKGLG 352
Query: 301 HFINQEKPDEVSDHICGFFSKF 322
HF+++E PD ++ HI FF KF
Sbjct: 353 HFLHEENPDVINQHIHNFFHKF 374
>AT3G51000.1 | chr3:18945258-18946499 REVERSE LENGTH=324
Length = 323
Score = 329 bits (843), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 159/321 (49%), Positives = 212/321 (66%), Gaps = 4/321 (1%)
Query: 3 AAEVRHRTVEVASGVRLHVAEAGPEDGPAVLLVHGFPELWYSWRHQMRALAARGFRAVAP 62
+ VR + ++ +G+ L+VAE G E+GP VLL+HGFPE WYSWRHQ+ L++ G+ VAP
Sbjct: 2 TSSVREKKIK-TNGIWLNVAEKGDEEGPLVLLLHGFPETWYSWRHQIDFLSSHGYHVVAP 60
Query: 63 DLRGYGDSDAPPGRDSYTVLHLVGDLVALIADVGQPRVFVAAHDWGAAVAWQLCLLRPDL 122
DLRGYGDSD+ P +SYTV HLV D++ L+ G + FVA HDWGA + W LCL RPD
Sbjct: 61 DLRGYGDSDSLPSHESYTVSHLVADVIGLLDHYGTTQAFVAGHDWGAIIGWCLCLFRPDR 120
Query: 123 VTAFVALSVEYHPRNPTRSPVQTLRAVCGDGHYICFFQKPGVAEAEFGRGDIKCLLKKFY 182
V F++LSV Y PR+P P + + GDG YI FQKPG AEA F + D ++KKF
Sbjct: 121 VKGFISLSVPYFPRDPKLKPSDFFK-IFGDGLYITQFQKPGRAEAAFAKHDCLSVMKKFL 179
Query: 183 GMRKAAPLIIPPGKTLFDSIDSDGTCPAWLSEEDISYYAEKFEKTGFTGGLNYYRCIDLN 242
+ + L+ PP + D ++ T P W++EE+I YAEKF+++GFTG LNYYR +D+N
Sbjct: 180 LITRTDYLVAPPDTEIIDHLEIPSTIPDWITEEEIQVYAEKFQRSGFTGPLNYYRSMDMN 239
Query: 243 WELTAPWTGVPIKVPTKFIVGDQDLTYNIP-GVKDYIHKGGLKACVPNLEDVVIMEGVAH 301
WE+ APW I VPTKFI GD+D+ Y P G +Y+ K VPNLE +V++EG H
Sbjct: 240 WEILAPWQDSKIVVPTKFIAGDKDIGYEGPNGTMEYVKGEVFKIVVPNLE-IVVIEGGHH 298
Query: 302 FINQEKPDEVSDHICGFFSKF 322
FI QEK ++VS I F +K
Sbjct: 299 FIQQEKSEQVSQEILSFLNKL 319
>AT2G26740.1 | chr2:11393148-11394257 REVERSE LENGTH=322
Length = 321
Score = 326 bits (835), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 170/322 (52%), Positives = 216/322 (67%), Gaps = 6/322 (1%)
Query: 6 VRHRTVEVASGVRLHVAEAGPEDGPAVLLVHGFPELWYSWRHQMRALAARGFRAVAPDLR 65
+ HR V +G+ +HVA GP DGP VLL+HGFPELWYSWRHQ+ LAARG+RAVAPDLR
Sbjct: 1 MEHRKVR-GNGIDIHVAIQGPSDGPIVLLLHGFPELWYSWRHQIPGLAARGYRAVAPDLR 59
Query: 66 GYGDSDAPPGRDSYTVLHLVGDLVALIADVG---QPRVFVAAHDWGAAVAWQLCLLRPDL 122
GYGDSDAP SYT ++VGDL+A+I+ + +VFV HDWGA +AW LCL RPD
Sbjct: 60 GYGDSDAPAEISSYTCFNIVGDLIAVISALTASEDEKVFVVGHDWGALIAWYLCLFRPDR 119
Query: 123 VTAFVALSV--EYHPRNPTRSPVQTLRAVCGDGHYICFFQKPGVAEAEFGRGDIKCLLKK 180
V A V LSV + P +P+ PV +RA GD +YIC FQ+ G EAE + ++K+
Sbjct: 120 VKALVNLSVPFSFRPTDPSVKPVDRMRAFYGDDYYICRFQEFGDVEAEIAEVGTERVMKR 179
Query: 181 FYGMRKAAPLIIPPGKTLFDSIDSDGTCPAWLSEEDISYYAEKFEKTGFTGGLNYYRCID 240
R P+IIP K+ + S P+WL+EED++Y+ KFE+ GF+G +NYYR +
Sbjct: 180 LLTYRTPGPVIIPKDKSFWGSKGETIPLPSWLTEEDVAYFVSKFEEKGFSGPVNYYRNFN 239
Query: 241 LNWELTAPWTGVPIKVPTKFIVGDQDLTYNIPGVKDYIHKGGLKACVPNLEDVVIMEGVA 300
N EL PW G I+VPTKF++G+ DL Y +PGVK+YIH K VP LE+ V+MEGVA
Sbjct: 240 RNNELLGPWVGSKIQVPTKFVIGELDLVYYMPGVKEYIHGPQFKEDVPLLEEPVVMEGVA 299
Query: 301 HFINQEKPDEVSDHICGFFSKF 322
HFINQEKP E+ I F SKF
Sbjct: 300 HFINQEKPQEILQIILDFISKF 321
>AT2G26750.1 | chr2:11395971-11397085 REVERSE LENGTH=321
Length = 320
Score = 317 bits (813), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 165/321 (51%), Positives = 215/321 (66%), Gaps = 5/321 (1%)
Query: 6 VRHRTVEVASGVRLHVAEAGPEDGPAVLLVHGFPELWYSWRHQMRALAARGFRAVAPDLR 65
+ HR V +G+ +HVA GP DG VLL+HGFPELWYSWRHQ+ LAARG+RAVAPDLR
Sbjct: 1 MEHRNVR-GNGIDIHVAIQGPSDGTIVLLLHGFPELWYSWRHQISGLAARGYRAVAPDLR 59
Query: 66 GYGDSDAPPGRDSYTVLHLVGDLVALIADVGQ--PRVFVAAHDWGAAVAWQLCLLRPDLV 123
GYGDSDAP S+T ++VGDLVA+I+ + + +VFV HDWGA +AW LCL RPD V
Sbjct: 60 GYGDSDAPAEISSFTCFNIVGDLVAVISTLIKEDKKVFVVGHDWGALIAWYLCLFRPDKV 119
Query: 124 TAFVALSV--EYHPRNPTRSPVQTLRAVCGDGHYICFFQKPGVAEAEFGRGDIKCLLKKF 181
A V LSV + P +P+ PV +RAV G+ +Y+C FQ+ G EAE + ++K+
Sbjct: 120 KALVNLSVPLSFWPTDPSVKPVDRMRAVYGNDYYVCRFQEVGDIEAEIAEVGTERVMKRL 179
Query: 182 YGMRKAAPLIIPPGKTLFDSIDSDGTCPAWLSEEDISYYAEKFEKTGFTGGLNYYRCIDL 241
R PLIIP K+ + S P+WL+EED++Y+ KF++ GF G +NYYR +
Sbjct: 180 LTYRTPGPLIIPKDKSFWGSKGETIPLPSWLTEEDVAYFVSKFKEKGFCGPVNYYRNFNR 239
Query: 242 NWELTAPWTGVPIKVPTKFIVGDQDLTYNIPGVKDYIHKGGLKACVPNLEDVVIMEGVAH 301
N EL PW G I+VPTKF++G+ DL Y +PGVK+YIH K VP +E+ V+MEGVAH
Sbjct: 240 NNELLGPWVGSKIQVPTKFVIGELDLVYYMPGVKEYIHGPQFKEDVPLIEEPVVMEGVAH 299
Query: 302 FINQEKPDEVSDHICGFFSKF 322
F+NQEKP E+ I F S F
Sbjct: 300 FLNQEKPQEILQIILDFISTF 320
>AT4G15955.3 | chr4:9043872-9045544 REVERSE LENGTH=305
Length = 304
Score = 306 bits (785), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 157/324 (48%), Positives = 207/324 (63%), Gaps = 35/324 (10%)
Query: 8 HRTVEVASGVRLHVAEAGPEDG-------PAVLLVHGFPELWYSWRHQMRALAARGFRAV 60
H V+V +G+ +HVAE P P +L +HGFPELWY+WRHQM AL++ G+R +
Sbjct: 7 HSFVKV-NGITMHVAEKSPSVAGNGAIRPPVILFLHGFPELWYTWRHQMVALSSLGYRTI 65
Query: 61 APDLRGYGDSDAPPGRDSYTVLHLVGDLVALI-ADVG-QPRVFVAAHDWGAAVAWQLCLL 118
APDLRGYGD+DAP D+YT LH+VGDL+ LI A VG + +VFV HDWGA +AW LCL
Sbjct: 66 APDLRGYGDTDAPESVDAYTSLHVVGDLIGLIDAVVGDREKVFVVGHDWGAIIAWHLCLF 125
Query: 119 RPDLVTAFVALSVEYHPRNPTRSPVQTLRAVCGDGHYICFFQKPGVAEAEFGRGDIKCLL 178
RPD V A V +SV + P NP R P T +A GD +YIC FQ ++ L+
Sbjct: 126 RPDRVKALVNMSVVFDPWNPKRKPTSTFKAFYGDDYYICRFQL------------LEILI 173
Query: 179 KKFYGMRKAAPLIIPPGKTLFDSIDSDGTCPAWLSEEDISYYAEKFEKTGFTGGLNYYRC 238
K + GK DS+ + P+WL++ D+ YY K+EK GFTG +NYYR
Sbjct: 174 KIH---------VCIVGKRYDDSV----SLPSWLTDSDVKYYVSKYEKNGFTGPVNYYRN 220
Query: 239 IDLNWELTAPWTGVPIKVPTKFIVGDQDLTYNIPGVKDYIHKGGLKACVPNLEDVVIMEG 298
+D WEL + +KVP KFI+GDQDLTY+IPG K YIH G K+ VP L++VV+++G
Sbjct: 221 MDRTWELMGSLSNAKVKVPVKFIIGDQDLTYHIPGSKKYIHDGRFKSHVPLLDEVVVIKG 280
Query: 299 VAHFINQEKPDEVSDHICGFFSKF 322
V HFI++E+PDE+S HI +F F
Sbjct: 281 VGHFIHEERPDEISKHIHDYFLTF 304
>AT4G12830.1 | chr4:7531189-7533327 FORWARD LENGTH=394
Length = 393
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 58/115 (50%), Gaps = 3/115 (2%)
Query: 18 RLHVAEAGPEDGPAVLLVHGFPELWYSWRHQMRALAARGFRAVAPDLRGYGDSDAPPGRD 77
R E+G D P V+L+HGFP YS+R + L ++ +RA+A D G+G SD P
Sbjct: 122 RWFSVESGSVDSPPVILIHGFPSQAYSYRKTIPVL-SKNYRAIAFDWLGFGFSDKPQAGY 180
Query: 78 --SYTVLHLVGDLVALIADVGQPRVFVAAHDWGAAVAWQLCLLRPDLVTAFVALS 130
+YT+ V L + I +V +V + + +A + RPD + + L+
Sbjct: 181 GFNYTMDEFVSSLESFIDEVTTSKVSLVVQGYFSAAVVKYARNRPDKIKNLILLN 235
>AT4G33180.1 | chr4:16000282-16002055 FORWARD LENGTH=308
Length = 307
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 68/143 (47%), Gaps = 9/143 (6%)
Query: 1 MAAAEVRHRTVEVASGVRLH------VAEAGPEDGPAVLLVHGF-PELWYSWRHQMRALA 53
+ AA + +T+ + S +H + +D P +LL+HGF P + WR QM+A +
Sbjct: 21 LRAAGLTSQTLSIDSETTIHFWGPPPLDHRSDDDRPVMLLLHGFGPSSMWQWRRQMQAFS 80
Query: 54 ARGFRAVAPDLRGYGDSDAPPGRDSYTVLHLVGDLVALIADVGQPRVFVAAHDWGAAVAW 113
FR +PDL +GDS + + T + + L+A +G + VA +G VA+
Sbjct: 81 PSAFRVYSPDLVFFGDSTS--SSTNRTEVFQAECMAKLMAKIGIGKYNVAGTSYGGFVAY 138
Query: 114 QLCLLRPDLVTAFVALSVEYHPR 136
+ + P+ V V S + R
Sbjct: 139 HMAKMWPEKVEKVVIASSGINMR 161
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.323 0.141 0.456
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,878,251
Number of extensions: 348862
Number of successful extensions: 709
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 700
Number of HSP's successfully gapped: 9
Length of query: 322
Length of database: 11,106,569
Length adjustment: 99
Effective length of query: 223
Effective length of database: 8,392,385
Effective search space: 1871501855
Effective search space used: 1871501855
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 112 (47.8 bits)