BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os01g0235200 Os01g0235200|AK064013
         (418 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G49250.1  | chr3:18258613-18260803 REVERSE LENGTH=421          310   9e-85
AT5G24280.1  | chr5:8251378-8261401 REVERSE LENGTH=1599           164   6e-41

>AT3G49250.1 | chr3:18258613-18260803 REVERSE LENGTH=421
          Length = 420

 Score =  310 bits (794), Expect = 9e-85,   Method: Compositional matrix adjust.
 Identities = 168/363 (46%), Positives = 244/363 (67%), Gaps = 6/363 (1%)

Query: 22  FNSKVMQDELQKLALKVNHHEENIRFLKSELNAVEDSCADLGIKIGNYYSSMAAIANNDT 81
           FNSK ++ +L+ +  K+  HE+N++FLKS+ N ++++  DL + +    SS    + N  
Sbjct: 51  FNSKRLESDLEAMGNKIKQHEDNLKFLKSQKNKMDEAIVDLQVHMSKLNSSPTPRSENSD 110

Query: 82  SVEEAEQRTIQSILKQDETAAGIICQLKIRHYQHASKLPLMKDVLGVVATLGKINNDNLS 141
           +  + E    Q IL+ + +AAG++  ++  H   AS+L L K V+GVVA LGK+N++NLS
Sbjct: 111 NSLQGEDINAQ-ILRHENSAAGVLSLVETLHGAQASQLMLTKGVVGVVAKLGKVNDENLS 169

Query: 142 RVLSEYLGLDNMLGVVCKTYDGVEGLETYDKEGMVDKTSGIHGLGRTIGKFLDGRFTVFC 201
           ++LS YLG  +ML VVC+ Y+ V  LE YD  G +D  +G+H LG +IG+ +   F   C
Sbjct: 170 QILSNYLGTRSMLAVVCRNYESVTALEAYDNHGNIDINAGLHCLGSSIGREIGDSFDAIC 229

Query: 202 LENIRPFSGDFMIDDPQRKLLLHKPRLPSGEFPPGFLGFAVNMIHLDQANLSCLTAGGHG 261
           LEN+RP+ G  + DD QR+L L KP+LP+GE PPGFLGFAVNMI +D A L C+T+ G+G
Sbjct: 230 LENLRPYVGQHIADDLQRRLDLLKPKLPNGECPPGFLGFAVNMIQIDPAYLLCVTSYGYG 289

Query: 262 LRETLFYSLFSQLQVYKTRAELRNAIPLINDGAVSLDGSILRPNGSFCLGNRASLGIQFP 321
           LRETLFY+LFS+LQVYKTRA++ +A+P I+DGAVSLDG I+R  G F LGNR  + ++F 
Sbjct: 290 LRETLFYNLFSRLQVYKTRADMISALPCISDGAVSLDGGIIRKTGIFNLGNRDEVNVRFA 349

Query: 322 V-TANLGVSNLPVTITELEEQVKHKNWEKERLLEDIKRQEDLLNQVKDLFSKKKEQFMAY 380
             TA+  + N     +E E+++K   W+KE+ LEDIKR++ L       F KKKE+F+  
Sbjct: 350 KPTASRTMDNY----SEAEKKMKELKWKKEKTLEDIKREQVLREHAVFNFGKKKEEFVRC 405

Query: 381 ITQ 383
           + Q
Sbjct: 406 LAQ 408



>AT5G24280.1 | chr5:8251378-8261401 REVERSE LENGTH=1599
          Length = 1598

 Score =  164 bits (416), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 106/282 (37%), Positives = 151/282 (53%), Gaps = 23/282 (8%)

Query: 90   TIQSILKQDE-----TAAGIICQLKIRHYQHASKLPLMKDVLGVVATLGKINNDNLSRVL 144
            T +S++KQ E     TAA + C L  +     S     K + GVVA LG + + +LSRVL
Sbjct: 1313 TKESMMKQIEEKHHDTAASVFCCLYRKAPPPRSLFLSQKGMFGVVALLGSVASTSLSRVL 1372

Query: 145  SEYLGLDNMLGVVCKTYDGVEGLETYDKEGMVDKTSGIHGLGRTIGKFLDGRFTVFCLEN 204
            SEYLG D ML +VCK+       + Y K               ++G+ +  RF V CL+ 
Sbjct: 1373 SEYLGKDTMLSLVCKSSQFGPKSDEYRK---------FQSEAASLGRSITNRFLVICLDA 1423

Query: 205  IRPFSGDFMIDDPQRKLLLHKPRLPSGEFPPGFLGFAVNMIHLDQANLSCLTAGGHGLRE 264
             RP+    + +DPQ++L +  P LP+G+  PGF G+AVNMI L    L   ++ G+GLRE
Sbjct: 1424 TRPWRNGLVRNDPQKRLAMDNPYLPNGDPIPGFKGYAVNMIDLASEELDIQSSSGYGLRE 1483

Query: 265  TLFYSLFSQLQVYKTRAELRNAIPLINDG-AVSLDGSILRPNGSFCLGNRASLGIQFPVT 323
            TLFY +F +LQVY+T   L  A+P IN G AVSLDG I R NG F      +  + FP+T
Sbjct: 1484 TLFYGVFRELQVYETAEHLEAALPHINGGDAVSLDGVIARENG-FIYSGCCTPEVHFPIT 1542

Query: 324  AN----LGVSNLPVT---ITELEEQVKHKNWEKERLLEDIKR 358
                    +  L +T     + EE +  +N    RL++ +K+
Sbjct: 1543 VTERQEKALVQLEITRDKKRKTEEMMTEENRSLRRLVKKLKK 1584



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.318    0.136    0.392 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 9,259,395
Number of extensions: 404115
Number of successful extensions: 1470
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 1466
Number of HSP's successfully gapped: 2
Length of query: 418
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 317
Effective length of database: 8,337,553
Effective search space: 2643004301
Effective search space used: 2643004301
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 113 (48.1 bits)