BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0228600 Os01g0228600|AK069655
(316 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G79870.1 | chr1:30044794-30045851 FORWARD LENGTH=314 342 2e-94
AT1G12550.1 | chr1:4274649-4275831 FORWARD LENGTH=324 216 1e-56
AT2G45630.2 | chr2:18796000-18797089 FORWARD LENGTH=339 185 3e-47
AT1G68010.2 | chr1:25493418-25495720 FORWARD LENGTH=388 81 6e-16
AT4G34200.1 | chr4:16374041-16376561 REVERSE LENGTH=604 72 3e-13
AT1G17745.2 | chr1:6101157-6104979 FORWARD LENGTH=652 63 2e-10
AT1G72190.1 | chr1:27167458-27169696 REVERSE LENGTH=374 58 6e-09
AT5G28310.1 | chr5:10300117-10301844 REVERSE LENGTH=234 56 3e-08
AT5G14780.1 | chr5:4777043-4779190 FORWARD LENGTH=385 50 2e-06
>AT1G79870.1 | chr1:30044794-30045851 FORWARD LENGTH=314
Length = 313
Score = 342 bits (876), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 170/316 (53%), Positives = 212/316 (67%), Gaps = 3/316 (0%)
Query: 1 MDSLGVLLVAPMNAYLEQELDRRCRLFRLWESPADRRDDYLRAHASSIRAVVPYALQGVD 60
M+S+GVL++ PM++YLE EL++R L R W SP + L H +SIRAVV A G D
Sbjct: 1 MESIGVLMMCPMSSYLENELEKRFNLLRFWTSP--EKSVLLETHRNSIRAVVGNASAGAD 58
Query: 61 AAMIDALPSLEIVSSFSVGIDRVDLDACLRRGVRVTNTPXXXXXXXXXXXXXXXXXXXRK 120
A +I LP+LEIVSSFSVG+D++DL C +G+RVTNTP R+
Sbjct: 59 AQLISDLPNLEIVSSFSVGLDKIDLGKCKEKGIRVTNTPDVLTEDVADLAIGLILALLRR 118
Query: 121 IPQADRYVRAGKWKSKGDFTLTTRFSGKXXXXXXXXXXXXXXXKRVEAFDCPVNYYQRTK 180
+ + DRYVR+GKWK +G+F LTT+FSGK KR EAF CP+NYY RT
Sbjct: 119 LCECDRYVRSGKWK-QGEFQLTTKFSGKSVGIIGLGRIGTAIAKRAEAFSCPINYYSRTI 177
Query: 181 QDHPGYTYYPSVVELAASSDVLVVACPLNEHTRHIVNREVMEALGPRGVLINIGRGPHVD 240
+ Y YYP+VV+LA +SD+LVVACPL E TRHIV+R+VM+ALG +GVLINIGRGPHVD
Sbjct: 178 KPDVAYKYYPTVVDLAQNSDILVVACPLTEQTRHIVDRQVMDALGAKGVLINIGRGPHVD 237
Query: 241 EAAMVXXXXXXXXXXXXXXVFEDEPNVPEALLGMDNVVLVPHVGSATHETRTAMADLVLG 300
E ++ VFE EP+VPE L G++NVVL+PHVGS T ETR AMADLV+G
Sbjct: 238 EQELIKALTEGRLGGAALDVFEQEPHVPEELFGLENVVLLPHVGSGTVETRNAMADLVVG 297
Query: 301 NLEAHVAGKPLLTQVV 316
NLEAH +GK LLT VV
Sbjct: 298 NLEAHFSGKSLLTPVV 313
>AT1G12550.1 | chr1:4274649-4275831 FORWARD LENGTH=324
Length = 323
Score = 216 bits (551), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 118/305 (38%), Positives = 162/305 (53%)
Query: 11 PMNAYLEQELDRRCRLFRLWESPADRRDDYLRAHASSIRAVVPYALQGVDAAMIDALPSL 70
P ++++ L R R S ++ + HASS RA V V ++ LPSL
Sbjct: 16 PSLTFMDEILTREFRTLITDTSSSESLPSFFPRHASSARAFVISGRLPVTDELLSHLPSL 75
Query: 71 EIVSSFSVGIDRVDLDACLRRGVRVTNTPXXXXXXXXXXXXXXXXXXXRKIPQADRYVRA 130
+I+ SVGID +DL AC RRG+ +TN R+IP ADRYVR+
Sbjct: 76 QILVCTSVGIDHIDLAACKRRGIVITNAGNAFSDDVADCAVGLLISVLRRIPAADRYVRS 135
Query: 131 GKWKSKGDFTLTTRFSGKXXXXXXXXXXXXXXXKRVEAFDCPVNYYQRTKQDHPGYTYYP 190
G W GDF L ++ SGK KR+E+F C ++Y R+++ Y YY
Sbjct: 136 GNWAKFGDFQLGSKVSGKRVGIVGLGSIGSFVAKRLESFGCVISYNSRSQKQSSPYRYYS 195
Query: 191 SVVELAASSDVLVVACPLNEHTRHIVNREVMEALGPRGVLINIGRGPHVDEAAMVXXXXX 250
++ LA ++DVLV+ C L + T HIVNREVME LG GV+IN+GRG +DE MV
Sbjct: 196 DILSLAENNDVLVLCCSLTDETHHIVNREVMELLGKDGVVINVGRGKLIDEKEMVKCLVD 255
Query: 251 XXXXXXXXXVFEDEPNVPEALLGMDNVVLVPHVGSATHETRTAMADLVLGNLEAHVAGKP 310
VFE+EP VP+ L G+DNVVL PH AT + +A + L NL+A + +P
Sbjct: 256 GVIGGAGLDVFENEPAVPQELFGLDNVVLSPHFAVATPGSLDNVAQIALANLKAFFSNRP 315
Query: 311 LLTQV 315
LL+ V
Sbjct: 316 LLSPV 320
>AT2G45630.2 | chr2:18796000-18797089 FORWARD LENGTH=339
Length = 338
Score = 185 bits (469), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 104/296 (35%), Positives = 154/296 (52%), Gaps = 4/296 (1%)
Query: 23 RCRLFRLWESPADRRDDYLRAHASSIRAVVPYALQGVDAAMIDALPSLEIVSSFSVGIDR 82
+ + + +ESP ++L H+ SI A++ V A +I LP+L +V + S G+D
Sbjct: 45 KFEILKAFESPLPL-PEFLAYHSDSISAIIAPVAAPVTADLIRILPNLRLVVTTSAGVDH 103
Query: 83 VDLDACLRRGVRVTNTPXXXXXXXXXXXXXXXXXXXRKIPQADRYVRAGKWKSKGDFTLT 142
VDL C RRG+ V N R+I A+R+V+ W KGD+ L
Sbjct: 104 VDLVECRRRGISVANAGSSFSEDVADTAVGLLIDVFRRISAANRFVKQRFWPLKGDYPLG 163
Query: 143 TRFSGKXXXXXXXXXXXXXXXKRVEAFDCPVNYYQRTKQ--DHPGYTYYPSVVELAASSD 200
++ K R++AF C ++Y R ++ D P Y YY + E+AA+SD
Sbjct: 164 SKLGRKRIGIVGLGSIGSKVATRLDAFGCQISYSSRNRKPYDVP-YHYYMDIEEMAANSD 222
Query: 201 VLVVACPLNEHTRHIVNREVMEALGPRGVLINIGRGPHVDEAAMVXXXXXXXXXXXXXXV 260
L++ C LNE T ++N++V+ ALG RGV++N+ RG +DE MV V
Sbjct: 223 ALIICCELNEKTLRLINKDVLSALGKRGVIVNVARGAIIDEEEMVRCLREGEIGGAGLDV 282
Query: 261 FEDEPNVPEALLGMDNVVLVPHVGSATHETRTAMADLVLGNLEAHVAGKPLLTQVV 316
FEDEPNVP+ L +DNVV PH T E + +V+GN+EA + KPLLT V+
Sbjct: 283 FEDEPNVPKELFELDNVVFSPHSAFMTLEGLEELGKVVVGNIEAFFSNKPLLTPVL 338
>AT1G68010.2 | chr1:25493418-25495720 FORWARD LENGTH=388
Length = 387
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 110/261 (42%), Gaps = 24/261 (9%)
Query: 74 SSFSVGIDRVDLDACLRRGVRVTNTPXXXXXXXXXXXXXXXXXXXRKIPQADRYVRAGKW 133
S+ +VG + VD++A + G+ V NTP R+I +AD ++R G +
Sbjct: 91 SNMAVGYNNVDVEAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRGGLY 150
Query: 134 KS-----------KGDFTLTTRFSGKXXXXXXXXXXXXXXXK----------RVEAFDCP 172
+ KG T+ +G+ R+E F
Sbjct: 151 EGWLPHLFVGNLLKGQ-TVGVIGAGRIGSAYARMMVEGFKMNLIYFDLYQSTRLEKFVTA 209
Query: 173 VNYYQRTKQDHP-GYTYYPSVVELAASSDVLVVACPLNEHTRHIVNREVMEALGP-RGVL 230
+ + + P + S+ E+ +D++ + L++ T H+VN+E + + +L
Sbjct: 210 YGQFLKANGEQPVTWKRASSMEEVLREADLISLHPVLDKTTYHLVNKERLAMMKKVEAIL 269
Query: 231 INIGRGPHVDEAAMVXXXXXXXXXXXXXXVFEDEPNVPEALLGMDNVVLVPHVGSATHET 290
+N RGP +DEAA+V VFE+EP + L N ++VPH+ SA+ T
Sbjct: 270 VNCSRGPVIDEAALVEHLKENPMFRVGLDVFEEEPFMKPGLADTKNAIVVPHIASASKWT 329
Query: 291 RTAMADLVLGNLEAHVAGKPL 311
R MA L N+ V G P+
Sbjct: 330 REGMATLAALNVLGRVKGYPI 350
>AT4G34200.1 | chr4:16374041-16376561 REVERSE LENGTH=604
Length = 603
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 100/247 (40%), Gaps = 12/247 (4%)
Query: 70 LEIVSSFSVGIDRVDLDACLRRGVRVTNTPXXXXXXXXXXXXXXXXXXXRKIPQADRYVR 129
L++V VGID VDL A G V N P R + QAD V+
Sbjct: 125 LKVVGRAGVGIDNVDLSAATEFGCLVVNAPTANTIAAAEHGIALMAAMARNVAQADASVK 184
Query: 130 AGKWKSKGDFTLTTRFSGKXXXXXXXXXXXXXXXKRVEAFDCPV---NYYQRTKQDHPGY 186
AG+WK + + GK +R + V + Y + H
Sbjct: 185 AGEWKR--NKYVGVSLVGKTLAVLGFGKVGTEVARRAKGLGMRVIAHDPYAPADRAHAIG 242
Query: 187 TYYPSVVELAASSDVLVVACPLNEHTRHIVNREVMEALGPRGV-LINIGRGPHVDEAAMV 245
S E A++D + + PL T I+N E + +GV ++N+ RG +DE A+V
Sbjct: 243 VDLVSFDEALATADFISLHMPLTPTTSKILNDETFAKM-KKGVRIVNVARGGVIDEDALV 301
Query: 246 XXXXXXXXXXXXXXVFEDEPNVPEA-LLGMDNVVLVPHVGSATHETRTA----MADLVLG 300
VF EP ++ L+ + V + PH+G++T E + +A+ V+G
Sbjct: 302 RALDAGIVAQAALDVFTKEPPAKDSKLVQHERVTVTPHLGASTMEAQEGVAIEIAEAVVG 361
Query: 301 NLEAHVA 307
L +A
Sbjct: 362 ALNGELA 368
>AT1G17745.2 | chr1:6101157-6104979 FORWARD LENGTH=652
Length = 651
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 103/280 (36%), Gaps = 37/280 (13%)
Query: 70 LEIVSSFSVGIDRVDLDACLRRGVRVTNTPXXXXXXXXXXXXXXXXXXXRKIPQADRYVR 129
L++V VGID VDL A G V N P R + QAD ++
Sbjct: 146 LKVVGRAGVGIDNVDLQAATEHGCLVVNAPTANTVAAAEHGIALLASMARNVAQADASIK 205
Query: 130 AG-----------KW---KSKGDFTLTTR-----------FSGKXXXXXXXXXXXXXXXK 164
AG +W +SK +T+ T GK +
Sbjct: 206 AGTLNYLFLVLLLRWNCRQSKHQYTIETETEKRSKYVGVSLVGKTLAVMGFGKVGTEVAR 265
Query: 165 RVEAFDCPV---NYYQRTKQDHPGYTYYPSVVELAASSDVLVVACPLNEHTRHIVNREVM 221
R + V + Y + S + +++D + + PL T+ + N E
Sbjct: 266 RAKGLGMTVISHDPYAPADRARALGVDLVSFDQAISTADFVSLHMPLTPATKKVFNDETF 325
Query: 222 EALGPRGVLINIGRGPHVDEAAMVXXXXXXXXXXXXXXVFEDEPNVPEA-LLGMDNVVLV 280
+ LIN+ RG +DE A+V VF +EP ++ L+ +NV +
Sbjct: 326 SKMKKGVRLINVARGGVIDEDALVRALDAGIVAQAALDVFCEEPPSKDSRLIQHENVTVT 385
Query: 281 PHVGSATHETR--------TAMADLVLGNLEAHVAGKPLL 312
PH+G++T E + A+A + G L A P++
Sbjct: 386 PHLGASTKEAQEGVAIEIAEAVAGALKGELSATAVNAPMV 425
>AT1G72190.1 | chr1:27167458-27169696 REVERSE LENGTH=374
Length = 373
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 107/277 (38%), Gaps = 39/277 (14%)
Query: 59 VDAAMIDALPSLEIVSSFSVGIDRVDLDACLRRGVRVTNTPXXXXXXXXXXXXXXXXXXX 118
+D+ +I +++++ + VG+D VD+DA + G++V P
Sbjct: 105 MDSNVISRASNIKLIMQYGVGLDGVDIDAATKHGIKVARIPSEGTGNAA----------- 153
Query: 119 RKIPQADRYVRAGKWKSKGDFTLTTR-----------FSGKXXXXXXXXXXXXXXXKRVE 167
+ Y+ G K + + ++ R GK KR++
Sbjct: 154 -SCSEMAIYLMLGLLKKQNEMQISLRNRLLGEPTGDTLLGKTVFILGYGNIGIELAKRLK 212
Query: 168 AFDCPVNYYQRTKQ-----------DHPGYTYYPSVVELAASSDVLVVACPLNEHTRHIV 216
F V +R D G + + A +D++VV LN+ T IV
Sbjct: 213 PFGSRVIATKRFWPASIVDSDSRLVDEKGS--HEDIYTFAGKADIVVVCLRLNKETAEIV 270
Query: 217 NREVMEALGPRGVLINIGRGPHVDEAAMVXXXXXXXXXXXXXXVFEDEPNVP-EALLGMD 275
N+E + ++ +L+NI RG ++ + V EP P + +L
Sbjct: 271 NKEFICSMKKGALLVNIARGGLINYESAFQNLESGHLGGLGIDVAWSEPFDPNDPILKFK 330
Query: 276 NVVLVPHVGSATHETRTAMADLVLGNLEAHV-AGKPL 311
NV++ PHV T + +MA +V G+L + G PL
Sbjct: 331 NVIITPHVAGVTEYSYRSMAKIV-GDLALQLHEGLPL 366
>AT5G28310.1 | chr5:10300117-10301844 REVERSE LENGTH=234
Length = 233
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 61/153 (39%), Gaps = 52/153 (33%)
Query: 165 RVEAFDCPVNYYQRTKQDHP-GYTYYPSVVELAASSDVLVVACPLNEHTRHIVNREVMEA 223
R++AF C ++Y R ++ + Y YY + E+
Sbjct: 132 RLKAFGCQISYSSRNRKPYAVPYHYYMDIEEM---------------------------- 163
Query: 224 LGPRGVLINIGRGPHVDEAAMVXXXXXXXXXXXXXXVFEDEPNVPEALLGMDNVVLVPHV 283
GV++N+ G +DE M NVP+ L +DNVV PH
Sbjct: 164 ---HGVIVNVALGAIIDEEEM--------------------SNVPKELFELDNVVFSPHC 200
Query: 284 GSATHETRTAMADLVLGNLEAHVAGKPLLTQVV 316
T E + +V+GN+EA + KPLLT V+
Sbjct: 201 AFMTLEGLEELGKVVVGNIEAFFSNKPLLTPVL 233
>AT5G14780.1 | chr5:4777043-4779190 FORWARD LENGTH=385
Length = 384
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/285 (20%), Positives = 102/285 (35%), Gaps = 8/285 (2%)
Query: 38 DDYLRAHASSIRAVV--PYALQGVDAAMIDALPSLEIVSSFSVGIDRVDLDACLRRGVRV 95
D L H + ++ P+ V A I +L+++ + +G D +DL A G+ V
Sbjct: 86 DCELEKHIPDLHVLISTPFHPAYVTAERIKKAKNLKLLLTAGIGSDHIDLQAAAAAGLTV 145
Query: 96 TNTPXXXXXXXXXXXXXXXXXXXRKIPQADRYVRAGKWKSKGDFTLTTRFSGKXXXXXXX 155
R V G+W G GK
Sbjct: 146 AEVTGSNVVSVAEDELMRILILMRNFVPGYNQVVKGEWNVAGIAYRAYDLEGKTIGTVGA 205
Query: 156 XXXXXXXXKRVEAFDCPVNYYQRTK-----QDHPGYTYYPSVVELAASSDVLVVACPLNE 210
+R++ F C + Y+ R + + G + + E+ DV+V+ PL E
Sbjct: 206 GRIGKLLLQRLKPFGCNLLYHDRLQMAPELEKETGAKFVEDLNEMLPKCDVIVINMPLTE 265
Query: 211 HTRHIVNREVMEALGPRGVLINIGRGPHVDEAAMVXXXXXXXXXXXXXXVFEDEPNVPE- 269
TR + N+E++ L +++N RG ++ A+V V++ +P +
Sbjct: 266 KTRGMFNKELIGKLKKGVLIVNNARGAIMERQAVVDAVESGHIGGYSGDVWDPQPAPKDH 325
Query: 270 ALLGMDNVVLVPHVGSATHETRTAMADLVLGNLEAHVAGKPLLTQ 314
M N + PH T + + A LE + G+ T+
Sbjct: 326 PWRYMPNQAMTPHTSGTTIDAQLRYAAGTKDMLERYFKGEDFPTE 370
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.321 0.136 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,542,016
Number of extensions: 183905
Number of successful extensions: 342
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 331
Number of HSP's successfully gapped: 9
Length of query: 316
Length of database: 11,106,569
Length adjustment: 99
Effective length of query: 217
Effective length of database: 8,392,385
Effective search space: 1821147545
Effective search space used: 1821147545
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 112 (47.8 bits)