BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0215500 Os01g0215500|AK059318
(94 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G28600.1 | chr1:10051228-10053073 REVERSE LENGTH=394 90 3e-19
AT1G28590.1 | chr1:10047509-10049300 REVERSE LENGTH=404 87 2e-18
AT1G28610.2 | chr1:10053877-10055665 REVERSE LENGTH=384 86 4e-18
AT2G27360.1 | chr2:11706233-11707905 FORWARD LENGTH=395 85 6e-18
AT5G45910.1 | chr5:18620420-18622264 REVERSE LENGTH=373 85 6e-18
AT1G28660.1 | chr1:10071856-10073371 REVERSE LENGTH=384 81 9e-17
AT1G31550.2 | chr1:11295635-11297284 REVERSE LENGTH=395 81 1e-16
AT1G28670.1 | chr1:10074669-10076250 REVERSE LENGTH=385 80 2e-16
AT1G28650.1 | chr1:10069547-10071082 REVERSE LENGTH=386 74 1e-14
AT1G28570.1 | chr1:10041838-10044112 REVERSE LENGTH=390 73 3e-14
AT1G28580.1 | chr1:10044603-10046379 REVERSE LENGTH=391 73 3e-14
AT1G28640.1 | chr1:10067563-10069109 REVERSE LENGTH=390 72 6e-14
AT3G48460.1 | chr3:17949496-17951082 FORWARD LENGTH=382 69 4e-13
AT4G01130.1 | chr4:485868-488007 FORWARD LENGTH=383 67 3e-12
AT1G54790.2 | chr1:20441124-20443997 REVERSE LENGTH=409 66 4e-12
AT1G56670.1 | chr1:21241688-21243965 FORWARD LENGTH=374 60 2e-10
AT3G62280.1 | chr3:23049484-23051116 REVERSE LENGTH=366 58 1e-09
AT1G09390.1 | chr1:3031264-3033415 FORWARD LENGTH=371 58 1e-09
AT5G03980.1 | chr5:1074205-1075289 REVERSE LENGTH=324 54 2e-08
AT3G05180.1 | chr3:1468599-1470529 REVERSE LENGTH=380 49 4e-07
AT3G26430.1 | chr3:9674419-9675889 FORWARD LENGTH=381 48 1e-06
AT5G14450.1 | chr5:4658488-4660034 FORWARD LENGTH=390 47 3e-06
>AT1G28600.1 | chr1:10051228-10053073 REVERSE LENGTH=394
Length = 393
Score = 89.7 bits (221), Expect = 3e-19, Method: Composition-based stats.
Identities = 42/74 (56%), Positives = 47/74 (63%), Gaps = 4/74 (5%)
Query: 16 EGALRACCGSGGGRYNFEFNMSAQCGMAGVTVCGDPSAYVNWDGVHLTEAAYHHVADGWL 75
E ACCG GG + FN + +CG GV C DPS YV WDGVH+TEAAY +ADG L
Sbjct: 301 ERPFPACCGIGG---PYNFNFTRKCGSVGVKSCKDPSKYVGWDGVHMTEAAYKWIADGIL 357
Query: 76 RGPYANPPLLSSSC 89
GPYANPP SC
Sbjct: 358 NGPYANPP-FDRSC 370
>AT1G28590.1 | chr1:10047509-10049300 REVERSE LENGTH=404
Length = 403
Score = 87.0 bits (214), Expect = 2e-18, Method: Composition-based stats.
Identities = 39/73 (53%), Positives = 50/73 (68%), Gaps = 3/73 (4%)
Query: 19 LRACCGSGGGRYNFEFNMSAQCGMAGVTVCGDPSAYVNWDGVHLTEAAYHHVADGWLRGP 78
L ACCG GG ++ FN S +CG GV C DPS YVN+DG+H+TEAAY +++G L+GP
Sbjct: 310 LPACCGVGG---SYNFNFSRRCGSVGVEYCDDPSQYVNYDGIHMTEAAYRLISEGLLKGP 366
Query: 79 YANPPLLSSSCSA 91
YA PP S S+
Sbjct: 367 YAIPPFKWSCLSS 379
>AT1G28610.2 | chr1:10053877-10055665 REVERSE LENGTH=384
Length = 383
Score = 85.9 bits (211), Expect = 4e-18, Method: Composition-based stats.
Identities = 38/64 (59%), Positives = 44/64 (68%), Gaps = 3/64 (4%)
Query: 19 LRACCGSGGGRYNFEFNMSAQCGMAGVTVCGDPSAYVNWDGVHLTEAAYHHVADGWLRGP 78
L ACCG GG + F +S +CG GV C DPS YVNWDGVH+TEAAY +ADG L+GP
Sbjct: 304 LPACCGLGG---PYNFTLSKKCGSVGVKYCSDPSKYVNWDGVHMTEAAYKWIADGLLKGP 360
Query: 79 YANP 82
Y P
Sbjct: 361 YTIP 364
>AT2G27360.1 | chr2:11706233-11707905 FORWARD LENGTH=395
Length = 394
Score = 85.1 bits (209), Expect = 6e-18, Method: Composition-based stats.
Identities = 40/66 (60%), Positives = 46/66 (69%), Gaps = 3/66 (4%)
Query: 19 LRACCGSGGGRYNFEFNMSAQCGMAGVTVCGDPSAYVNWDGVHLTEAAYHHVADGWLRGP 78
L ACCG GG YNF F S +CG GV C DPS YVNWDG+H+TEAAY +++G L GP
Sbjct: 308 LPACCGLGG-PYNFTF--SIKCGSKGVEYCSDPSKYVNWDGIHMTEAAYKWISEGVLTGP 364
Query: 79 YANPPL 84
YA PP
Sbjct: 365 YAIPPF 370
>AT5G45910.1 | chr5:18620420-18622264 REVERSE LENGTH=373
Length = 372
Score = 85.1 bits (209), Expect = 6e-18, Method: Composition-based stats.
Identities = 36/64 (56%), Positives = 44/64 (68%), Gaps = 2/64 (3%)
Query: 19 LRACCGSGGGRYNFEFNMSAQCGMAGVTVCGDPSAYVNWDGVHLTEAAYHHVADGWLRGP 78
L+ACCG G GRYN + N+ +CG G T C DPS Y NWDG+HLTEAAY H+A G + G
Sbjct: 308 LKACCGGGDGRYNVQPNV--RCGEKGSTTCEDPSTYANWDGIHLTEAAYRHIATGLISGR 365
Query: 79 YANP 82
+ P
Sbjct: 366 FTMP 369
>AT1G28660.1 | chr1:10071856-10073371 REVERSE LENGTH=384
Length = 383
Score = 81.3 bits (199), Expect = 9e-17, Method: Composition-based stats.
Identities = 38/64 (59%), Positives = 45/64 (70%), Gaps = 3/64 (4%)
Query: 19 LRACCGSGGGRYNFEFNMSAQCGMAGVTVCGDPSAYVNWDGVHLTEAAYHHVADGWLRGP 78
L ACCG GG +YNF + +CG GV+ C +PS YVNWDG HLTEAAY +A+G L GP
Sbjct: 309 LAACCGVGG-KYNF--TIGKECGYEGVSYCQNPSEYVNWDGYHLTEAAYQKMAEGILNGP 365
Query: 79 YANP 82
YA P
Sbjct: 366 YATP 369
>AT1G31550.2 | chr1:11295635-11297284 REVERSE LENGTH=395
Length = 394
Score = 80.9 bits (198), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 49/76 (64%), Gaps = 3/76 (3%)
Query: 19 LRACCGSGGGRYNFEFNMSAQCGMAGVTVCGDPSAYVNWDGVHLTEAAYHHVADGWLRGP 78
L ACCG GG + FN+S CG GV C DPS YV WDG+H+TEAA+ +ADG ++GP
Sbjct: 309 LSACCGVGGP---YNFNLSRSCGSVGVEACSDPSKYVAWDGLHMTEAAHKSMADGLVKGP 365
Query: 79 YANPPLLSSSCSARAR 94
YA PP S S+ +
Sbjct: 366 YAIPPFDWSCLSSMIK 381
>AT1G28670.1 | chr1:10074669-10076250 REVERSE LENGTH=385
Length = 384
Score = 80.1 bits (196), Expect = 2e-16, Method: Composition-based stats.
Identities = 37/64 (57%), Positives = 43/64 (67%), Gaps = 3/64 (4%)
Query: 19 LRACCGSGGGRYNFEFNMSAQCGMAGVTVCGDPSAYVNWDGVHLTEAAYHHVADGWLRGP 78
L ACCG GG +YNF + +CG GV C +PS YVNWDG HLTEAAY + +G L GP
Sbjct: 310 LAACCGVGG-KYNF--TIGKECGYEGVNYCQNPSEYVNWDGYHLTEAAYQKMTEGILNGP 366
Query: 79 YANP 82
YA P
Sbjct: 367 YATP 370
>AT1G28650.1 | chr1:10069547-10071082 REVERSE LENGTH=386
Length = 385
Score = 74.3 bits (181), Expect = 1e-14, Method: Composition-based stats.
Identities = 35/64 (54%), Positives = 41/64 (64%), Gaps = 3/64 (4%)
Query: 19 LRACCGSGGGRYNFEFNMSAQCGMAGVTVCGDPSAYVNWDGVHLTEAAYHHVADGWLRGP 78
L ACCG GG +YNF + +CG GV+ C +PS YVNWDG HLTEA Y +A G L G
Sbjct: 311 LAACCGVGG-QYNF--TIGKECGENGVSYCQNPSEYVNWDGYHLTEATYQKMAQGLLNGR 367
Query: 79 YANP 82
Y P
Sbjct: 368 YTTP 371
>AT1G28570.1 | chr1:10041838-10044112 REVERSE LENGTH=390
Length = 389
Score = 72.8 bits (177), Expect = 3e-14, Method: Composition-based stats.
Identities = 36/76 (47%), Positives = 45/76 (59%), Gaps = 3/76 (3%)
Query: 19 LRACCGSGGGRYNFEFNMSAQCGMAGVTVCGDPSAYVNWDGVHLTEAAYHHVADGWLRGP 78
L ACC GG F F + + G C DPS YV+WDGVH+TEAAY +A+G L+GP
Sbjct: 308 LPACCALGG---PFNFTLGRKRGTQVPECCDDPSKYVSWDGVHMTEAAYRLMAEGILKGP 364
Query: 79 YANPPLLSSSCSARAR 94
YA PP S S+ +
Sbjct: 365 YAIPPFDWSCLSSEIK 380
>AT1G28580.1 | chr1:10044603-10046379 REVERSE LENGTH=391
Length = 390
Score = 72.8 bits (177), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 43/66 (65%), Gaps = 3/66 (4%)
Query: 19 LRACCGSGGGRYNFEFNMSAQCGMAGVTVCGDPSAYVNWDGVHLTEAAYHHVADGWLRGP 78
L ACCG+GG + + + +CG V C DPS YV WDGVH+TEAAY +A+G L GP
Sbjct: 311 LSACCGAGGP---YNYTVGRKCGTDIVESCDDPSKYVAWDGVHMTEAAYRLMAEGILNGP 367
Query: 79 YANPPL 84
YA PP
Sbjct: 368 YAIPPF 373
>AT1G28640.1 | chr1:10067563-10069109 REVERSE LENGTH=390
Length = 389
Score = 72.0 bits (175), Expect = 6e-14, Method: Composition-based stats.
Identities = 37/73 (50%), Positives = 45/73 (61%), Gaps = 4/73 (5%)
Query: 19 LRACCGSGGGRYNFEFNMSAQCGMAGVTVCGDPSAYVNWDGVHLTEAAYHHVADGWLRGP 78
L ACCG GG +YNF + +CG GV+ C +PS YVNWDG HLTEA + +A L G
Sbjct: 309 LAACCGVGG-QYNF--TIGKECGHRGVSCCQNPSEYVNWDGYHLTEATHQKMAQVILNGT 365
Query: 79 YANPPLLSSSCSA 91
YA+P SCS
Sbjct: 366 YASPA-FDWSCSG 377
>AT3G48460.1 | chr3:17949496-17951082 FORWARD LENGTH=382
Length = 381
Score = 69.3 bits (168), Expect = 4e-13, Method: Composition-based stats.
Identities = 32/64 (50%), Positives = 40/64 (62%), Gaps = 3/64 (4%)
Query: 19 LRACCGSGGGRYNFEFNMSAQCGMAGVTVCGDPSAYVNWDGVHLTEAAYHHVADGWLRGP 78
+ACCG G YNF+ + CG TVC DP+ Y+NWDGVHLTEA Y +AD +L G
Sbjct: 308 FKACCGIGE-PYNFQVFQT--CGTDAATVCKDPNQYINWDGVHLTEAMYKVMADMFLDGT 364
Query: 79 YANP 82
+ P
Sbjct: 365 FTRP 368
>AT4G01130.1 | chr4:485868-488007 FORWARD LENGTH=383
Length = 382
Score = 66.6 bits (161), Expect = 3e-12, Method: Composition-based stats.
Identities = 36/86 (41%), Positives = 47/86 (54%), Gaps = 11/86 (12%)
Query: 14 GEEGALRACCGSGGGRYNFEFNMSAQCGMAGV--------TVCGDPSAYVNWDGVHLTEA 65
G + ++ACCG GG YNF N CG V C DP YV+WDG+H TEA
Sbjct: 298 GMKHGIKACCGYGGRPYNF--NQKLFCGNTKVIGNFSTTAKACHDPHNYVSWDGIHATEA 355
Query: 66 AYHHVADGWLRGPYANPP-LLSSSCS 90
A HH++ L G + PP +L++ CS
Sbjct: 356 ANHHISMAILDGSISYPPFILNNLCS 381
>AT1G54790.2 | chr1:20441124-20443997 REVERSE LENGTH=409
Length = 408
Score = 65.9 bits (159), Expect = 4e-12, Method: Composition-based stats.
Identities = 33/79 (41%), Positives = 45/79 (56%), Gaps = 10/79 (12%)
Query: 14 GEEGALRACCGSGGGRYNFEFNMSAQCG----MAGVTV----CGDPSAYVNWDGVHLTEA 65
G E L ACCG GG N++ ++ CG + G++V C D S Y+NWDG+H TEA
Sbjct: 320 GFEKPLMACCGVGGAPLNYDSRIT--CGQTKVLDGISVTAKACNDSSEYINWDGIHYTEA 377
Query: 66 AYHHVADGWLRGPYANPPL 84
A V+ L G Y++PP
Sbjct: 378 ANEFVSSQILTGKYSDPPF 396
>AT1G56670.1 | chr1:21241688-21243965 FORWARD LENGTH=374
Length = 373
Score = 60.5 bits (145), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/70 (42%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 14 GEEGALRACCGSGGGRYNFEFNMSAQCGMAGVTVCGDPSAYVNWDGVHLTEAAYHHVADG 73
G + L ACCG GG YN+ N+ CG G VC + S +++WDG+H TE A VA
Sbjct: 297 GFKSPLMACCGYGGTPYNY--NVKITCGHKGSNVCEEGSRFISWDGIHYTETANAIVAMK 354
Query: 74 WLRGPYANPP 83
L Y+ PP
Sbjct: 355 VLSMHYSKPP 364
>AT3G62280.1 | chr3:23049484-23051116 REVERSE LENGTH=366
Length = 365
Score = 57.8 bits (138), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/64 (45%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 19 LRACCGSGGGRYNFEFNMSAQCGMAGVTVCGDPSAYVNWDGVHLTEAAYHHVADGWLRGP 78
L ACCG GG N++ A CG G T+C D + + WDGVH TEAA V D L
Sbjct: 296 LMACCGYGGRPNNYD--RKATCGQPGSTICRDVTKAIVWDGVHYTEAANRFVVDAVLTNR 353
Query: 79 YANP 82
Y+ P
Sbjct: 354 YSYP 357
>AT1G09390.1 | chr1:3031264-3033415 FORWARD LENGTH=371
Length = 370
Score = 57.8 bits (138), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/70 (41%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 14 GEEGALRACCGSGGGRYNFEFNMSAQCGMAGVTVCGDPSAYVNWDGVHLTEAAYHHVADG 73
G E L ACCG GG YN+ N++ CG G C + S +++WDG+H TE A VA
Sbjct: 294 GFEKPLMACCGYGGPPYNYNVNIT--CGNGGSKSCDEGSRFISWDGIHYTETANAIVAMK 351
Query: 74 WLRGPYANPP 83
L ++ PP
Sbjct: 352 VLSMQHSTPP 361
>AT5G03980.1 | chr5:1074205-1075289 REVERSE LENGTH=324
Length = 323
Score = 53.5 bits (127), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 3/54 (5%)
Query: 18 ALRACCGSGGGRYNFEFNMSAQCGMAGVTVCGDPSAYVNWDGVHLTEAAYHHVA 71
AL++CCG+GG YN++ G GV VC +P +++WDGVHLT+ AY ++
Sbjct: 257 ALKSCCGTGGA-YNYDGKRPY--GAVGVPVCQNPHKFISWDGVHLTQKAYRFMS 307
>AT3G05180.1 | chr3:1468599-1470529 REVERSE LENGTH=380
Length = 379
Score = 49.3 bits (116), Expect = 4e-07, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 39/75 (52%), Gaps = 10/75 (13%)
Query: 14 GEEGALRACCGSGGGRYNFEFNMSAQCGMA----GVTV----CGDPSAYVNWDGVHLTEA 65
G + ++ CCG+GG N++ + CG G + C D S YVNWDG+H TEA
Sbjct: 299 GFDHSIMVCCGTGGPPLNYDDQVG--CGKTARSNGTIITAKPCYDSSKYVNWDGIHYTEA 356
Query: 66 AYHHVADGWLRGPYA 80
A VA L G Y+
Sbjct: 357 ANRFVALHILTGKYS 371
>AT3G26430.1 | chr3:9674419-9675889 FORWARD LENGTH=381
Length = 380
Score = 47.8 bits (112), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/83 (37%), Positives = 43/83 (51%), Gaps = 15/83 (18%)
Query: 19 LRACCGSGGGRYNFEFNMSAQCGMAGVTV----------CGDPSAYVNWDGVHLTEAAYH 68
L ACCG GG +YNF N +CG A V + C D S V+WDG+H TE
Sbjct: 301 LVACCGHGG-KYNF--NKLIKCG-AKVMIKGKEIVLAKSCNDVSFRVSWDGIHFTETTNS 356
Query: 69 HVADGWLRGPYANPPL-LSSSCS 90
+ G +++PPL + S+C+
Sbjct: 357 WIFQQINDGAFSDPPLPVKSACT 379
>AT5G14450.1 | chr5:4658488-4660034 FORWARD LENGTH=390
Length = 389
Score = 46.6 bits (109), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 15/85 (17%)
Query: 14 GEEGALRACCGSGGGRYNFEFNMSAQCGMAGVT--------VCGDPSAYVNWDGVHLTEA 65
G L+ CCG Y+ +++ CG G C +P V+WDGVH TEA
Sbjct: 308 GFANPLKVCCG-----YHEKYD-HIWCGNKGKVNNTEIYGGSCPNPVMAVSWDGVHYTEA 361
Query: 66 AYHHVADGWLRGPYANPPL-LSSSC 89
A HVAD L G +PP+ ++ +C
Sbjct: 362 ANKHVADRTLNGLLTDPPVPITRAC 386
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.136 0.459
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 2,512,107
Number of extensions: 97770
Number of successful extensions: 308
Number of sequences better than 1.0e-05: 23
Number of HSP's gapped: 307
Number of HSP's successfully gapped: 23
Length of query: 94
Length of database: 11,106,569
Length adjustment: 64
Effective length of query: 30
Effective length of database: 9,351,945
Effective search space: 280558350
Effective search space used: 280558350
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 105 (45.1 bits)