BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0213000 Os01g0213000|Os01g0213000
(166 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G66070.2 | chr5:26421923-26423033 FORWARD LENGTH=246 52 1e-07
AT3G18930.1 | chr3:6524110-6525345 REVERSE LENGTH=412 51 3e-07
AT3G10910.1 | chr3:3413068-3413613 REVERSE LENGTH=182 50 4e-07
AT2G25410.1 | chr2:10814470-10815917 FORWARD LENGTH=378 50 6e-07
AT5G06490.1 | chr5:1977996-1978589 REVERSE LENGTH=198 50 6e-07
AT1G35330.1 | chr1:12965046-12966113 FORWARD LENGTH=328 50 6e-07
AT2G35910.1 | chr2:15073225-15073878 REVERSE LENGTH=218 50 8e-07
AT4G33565.1 | chr4:16136821-16137924 FORWARD LENGTH=368 49 1e-06
AT2G46494.1 | chr2:19082344-19083811 REVERSE LENGTH=363 49 2e-06
AT1G49200.1 | chr1:18198298-18198978 FORWARD LENGTH=227 49 2e-06
AT1G22500.1 | chr1:7949581-7950726 FORWARD LENGTH=382 49 2e-06
AT5G05280.1 | chr5:1565509-1566039 REVERSE LENGTH=177 48 2e-06
AT5G53110.1 | chr5:21529022-21533008 FORWARD LENGTH=383 48 2e-06
AT1G72200.1 | chr1:27169935-27171149 REVERSE LENGTH=405 48 2e-06
AT3G14320.1 | chr3:4777731-4778345 REVERSE LENGTH=205 48 3e-06
AT5G40250.1 | chr5:16086056-16087186 FORWARD LENGTH=377 48 3e-06
AT2G46495.1 | chr2:19084134-19085704 REVERSE LENGTH=373 48 3e-06
AT3G55530.1 | chr3:20595300-20597188 REVERSE LENGTH=274 48 3e-06
AT1G28040.1 | chr1:9773580-9774910 REVERSE LENGTH=300 48 3e-06
AT1G49220.1 | chr1:18205946-18206701 FORWARD LENGTH=252 48 3e-06
AT4G09110.1 | chr4:5812488-5813396 FORWARD LENGTH=303 47 4e-06
AT5G57750.1 | chr5:23399668-23400300 FORWARD LENGTH=211 47 4e-06
AT4G35840.1 | chr4:16981083-16982266 FORWARD LENGTH=237 47 4e-06
AT5G17600.1 | chr5:5800029-5801117 REVERSE LENGTH=363 47 4e-06
AT1G49210.1 | chr1:18201994-18202671 FORWARD LENGTH=226 47 4e-06
AT5G05810.1 | chr5:1746938-1747999 FORWARD LENGTH=354 47 4e-06
AT3G03550.1 | chr3:850391-851461 REVERSE LENGTH=357 47 4e-06
AT3G18773.1 | chr3:6466304-6466966 FORWARD LENGTH=221 47 5e-06
AT4G28890.1 | chr4:14256437-14257735 REVERSE LENGTH=433 47 5e-06
AT2G27940.1 | chr2:11897963-11898742 FORWARD LENGTH=238 47 5e-06
AT4G09120.1 | chr4:5813998-5815035 FORWARD LENGTH=346 47 5e-06
AT2G46493.1 | chr2:19080254-19081242 REVERSE LENGTH=185 47 5e-06
AT2G20030.1 | chr2:8647813-8648985 FORWARD LENGTH=391 47 6e-06
AT4G09130.1 | chr4:5815849-5816922 FORWARD LENGTH=358 47 7e-06
AT1G72220.1 | chr1:27184388-27185629 REVERSE LENGTH=414 47 7e-06
AT3G48030.1 | chr3:17725410-17727954 REVERSE LENGTH=350 46 7e-06
AT2G18650.1 | chr2:8086860-8088131 REVERSE LENGTH=424 46 7e-06
AT2G47560.1 | chr2:19511934-19512617 REVERSE LENGTH=228 46 8e-06
AT3G05200.1 | chr3:1477377-1478573 FORWARD LENGTH=399 46 8e-06
AT5G36001.1 | chr5:14142050-14143143 FORWARD LENGTH=323 46 8e-06
AT1G80400.1 | chr1:30225864-30227360 FORWARD LENGTH=408 46 9e-06
AT2G35000.1 | chr2:14751809-14752945 REVERSE LENGTH=379 46 1e-05
>AT5G66070.2 | chr5:26421923-26423033 FORWARD LENGTH=246
Length = 245
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 23/32 (71%)
Query: 111 GETVRALPCCPHAFHARCVDAWLRLRPTCPLC 142
GETVR+LP C H FH C+D WLR +CPLC
Sbjct: 210 GETVRSLPHCHHMFHLPCIDKWLRRHASCPLC 241
>AT3G18930.1 | chr3:6524110-6525345 REVERSE LENGTH=412
Length = 411
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 22/32 (68%)
Query: 111 GETVRALPCCPHAFHARCVDAWLRLRPTCPLC 142
G+ VR LP C HAFH C+D WLR P CPLC
Sbjct: 166 GDYVRTLPLCFHAFHLECIDEWLRSHPNCPLC 197
>AT3G10910.1 | chr3:3413068-3413613 REVERSE LENGTH=182
Length = 181
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 21/32 (65%)
Query: 111 GETVRALPCCPHAFHARCVDAWLRLRPTCPLC 142
GE VR LP C H FH RC+D WL R +CP C
Sbjct: 124 GEKVRVLPKCNHGFHVRCIDTWLLSRSSCPTC 155
>AT2G25410.1 | chr2:10814470-10815917 FORWARD LENGTH=378
Length = 377
Score = 50.1 bits (118), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 23/31 (74%)
Query: 112 ETVRALPCCPHAFHARCVDAWLRLRPTCPLC 142
ETVR LP C H FH C+DAWL+L +CP+C
Sbjct: 338 ETVRCLPECEHCFHTECIDAWLKLHSSCPVC 368
>AT5G06490.1 | chr5:1977996-1978589 REVERSE LENGTH=198
Length = 197
Score = 50.1 bits (118), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 22/31 (70%)
Query: 112 ETVRALPCCPHAFHARCVDAWLRLRPTCPLC 142
+ +R LP C H FH CVD WLRL PTCP+C
Sbjct: 140 DMIRVLPDCNHLFHDNCVDPWLRLHPTCPVC 170
>AT1G35330.1 | chr1:12965046-12966113 FORWARD LENGTH=328
Length = 327
Score = 50.1 bits (118), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 23/31 (74%)
Query: 112 ETVRALPCCPHAFHARCVDAWLRLRPTCPLC 142
ET+R +P C HAFHA C+D WL R TCP+C
Sbjct: 139 ETLRLMPPCSHAFHASCIDVWLSSRSTCPVC 169
>AT2G35910.1 | chr2:15073225-15073878 REVERSE LENGTH=218
Length = 217
Score = 49.7 bits (117), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 22/29 (75%)
Query: 114 VRALPCCPHAFHARCVDAWLRLRPTCPLC 142
+R LP C H FH +C+D WLRL PTCP+C
Sbjct: 160 LRQLPDCNHLFHLKCIDTWLRLNPTCPVC 188
>AT4G33565.1 | chr4:16136821-16137924 FORWARD LENGTH=368
Length = 367
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 21/31 (67%)
Query: 112 ETVRALPCCPHAFHARCVDAWLRLRPTCPLC 142
ET+R LP C HAFH C+D WLR CPLC
Sbjct: 228 ETLRLLPKCKHAFHLYCIDTWLRSHTNCPLC 258
>AT2G46494.1 | chr2:19082344-19083811 REVERSE LENGTH=363
Length = 362
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 24/31 (77%)
Query: 112 ETVRALPCCPHAFHARCVDAWLRLRPTCPLC 142
ETVR +P C H FHA+C+D WL++ +CPLC
Sbjct: 327 ETVRFIPECDHCFHAKCIDVWLKIHGSCPLC 357
>AT1G49200.1 | chr1:18198298-18198978 FORWARD LENGTH=227
Length = 226
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 21/32 (65%)
Query: 111 GETVRALPCCPHAFHARCVDAWLRLRPTCPLC 142
GE +R LP C H FH RC+D WL+ TCP C
Sbjct: 146 GEQIRMLPKCHHGFHVRCIDKWLQQHLTCPKC 177
>AT1G22500.1 | chr1:7949581-7950726 FORWARD LENGTH=382
Length = 381
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 23/31 (74%)
Query: 112 ETVRALPCCPHAFHARCVDAWLRLRPTCPLC 142
ET+R +P C H FH C+DAWLR + TCPLC
Sbjct: 129 ETLRLIPQCCHVFHPGCIDAWLRSQTTCPLC 159
>AT5G05280.1 | chr5:1565509-1566039 REVERSE LENGTH=177
Length = 176
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 21/32 (65%)
Query: 111 GETVRALPCCPHAFHARCVDAWLRLRPTCPLC 142
GETVR LP C H FH +C+D WL +CP C
Sbjct: 123 GETVRVLPKCNHGFHVKCIDTWLLSHSSCPTC 154
>AT5G53110.1 | chr5:21529022-21533008 FORWARD LENGTH=383
Length = 382
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 23/31 (74%)
Query: 112 ETVRALPCCPHAFHARCVDAWLRLRPTCPLC 142
ET+R +P C H FHA C+D WL+L TCP+C
Sbjct: 341 ETLRTIPQCQHCFHADCIDEWLKLNGTCPVC 371
>AT1G72200.1 | chr1:27169935-27171149 REVERSE LENGTH=405
Length = 404
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 22/31 (70%)
Query: 112 ETVRALPCCPHAFHARCVDAWLRLRPTCPLC 142
ET+R +P C H FH C+DAWLR TCPLC
Sbjct: 155 ETLRLIPKCCHVFHPGCIDAWLRSHTTCPLC 185
>AT3G14320.1 | chr3:4777731-4778345 REVERSE LENGTH=205
Length = 204
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 21/32 (65%)
Query: 111 GETVRALPCCPHAFHARCVDAWLRLRPTCPLC 142
G+ R LP C H FH C+D+WL+ TCP+C
Sbjct: 98 GDKARVLPSCDHWFHVECIDSWLQSNSTCPIC 129
>AT5G40250.1 | chr5:16086056-16087186 FORWARD LENGTH=377
Length = 376
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 21/31 (67%)
Query: 112 ETVRALPCCPHAFHARCVDAWLRLRPTCPLC 142
+ +R LP C HAFH C+D WL+ TCPLC
Sbjct: 154 DKLRLLPMCSHAFHLNCIDTWLQSNSTCPLC 184
>AT2G46495.1 | chr2:19084134-19085704 REVERSE LENGTH=373
Length = 372
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 112 ETVRALPCCPHAFHARCVDAWLRLRPTCPLC 142
ETVR +P C H FH+ C+D WL++ +CPLC
Sbjct: 331 ETVRCIPECDHCFHSECIDVWLKIHGSCPLC 361
>AT3G55530.1 | chr3:20595300-20597188 REVERSE LENGTH=274
Length = 273
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
Query: 111 GETVRALPCCPHAFHARCVDAWLRLRPTCPLC 142
GE VR LPC H FHA C+D WLR + TCP+C
Sbjct: 221 GEIVRTLPCL-HQFHAGCIDPWLRQQGTCPVC 251
>AT1G28040.1 | chr1:9773580-9774910 REVERSE LENGTH=300
Length = 299
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 112 ETVRALPCCPHAFHARCVDAWLRLRPTCPLC 142
ETVR +P C H FH +C+D WL++ +CP+C
Sbjct: 264 ETVRCMPECDHCFHVQCIDEWLKIHSSCPVC 294
>AT1G49220.1 | chr1:18205946-18206701 FORWARD LENGTH=252
Length = 251
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 21/32 (65%)
Query: 111 GETVRALPCCPHAFHARCVDAWLRLRPTCPLC 142
GE +R LP C H FH RC+D WL+ TCP C
Sbjct: 145 GEQLRLLPKCNHGFHVRCIDKWLQQHLTCPKC 176
>AT4G09110.1 | chr4:5812488-5813396 FORWARD LENGTH=303
Length = 302
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 21/31 (67%)
Query: 112 ETVRALPCCPHAFHARCVDAWLRLRPTCPLC 142
ET+R +P C H FHA C+D WL + TCP C
Sbjct: 134 ETLRWMPPCSHTFHANCIDVWLSSQSTCPAC 164
>AT5G57750.1 | chr5:23399668-23400300 FORWARD LENGTH=211
Length = 210
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 20/31 (64%)
Query: 112 ETVRALPCCPHAFHARCVDAWLRLRPTCPLC 142
+ +R LP C HAFH C+D WL TCPLC
Sbjct: 133 DELRLLPKCSHAFHVECIDTWLLTNSTCPLC 163
>AT4G35840.1 | chr4:16981083-16982266 FORWARD LENGTH=237
Length = 236
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 22/32 (68%)
Query: 111 GETVRALPCCPHAFHARCVDAWLRLRPTCPLC 142
GETVR+LP C H FH C+D WL +CP+C
Sbjct: 201 GETVRSLPHCHHMFHLPCIDNWLFRHGSCPMC 232
>AT5G17600.1 | chr5:5800029-5801117 REVERSE LENGTH=363
Length = 362
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 21/32 (65%)
Query: 111 GETVRALPCCPHAFHARCVDAWLRLRPTCPLC 142
E++R LP C HAFH C+D WL+ CPLC
Sbjct: 152 NESLRLLPKCNHAFHLPCIDTWLKSHSNCPLC 183
>AT1G49210.1 | chr1:18201994-18202671 FORWARD LENGTH=226
Length = 225
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 21/32 (65%)
Query: 111 GETVRALPCCPHAFHARCVDAWLRLRPTCPLC 142
GE +R LP C H FH RC+D WL+ TCP C
Sbjct: 145 GEQLRLLPKCNHGFHVRCIDKWLQHHLTCPKC 176
>AT5G05810.1 | chr5:1746938-1747999 FORWARD LENGTH=354
Length = 353
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 20/31 (64%)
Query: 112 ETVRALPCCPHAFHARCVDAWLRLRPTCPLC 142
E +R LP C HAFH CVD WL TCPLC
Sbjct: 103 EVLRLLPKCKHAFHVECVDTWLDAHSTCPLC 133
>AT3G03550.1 | chr3:850391-851461 REVERSE LENGTH=357
Length = 356
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 21/32 (65%)
Query: 111 GETVRALPCCPHAFHARCVDAWLRLRPTCPLC 142
E++R LP C HAFH C+D WL+ CPLC
Sbjct: 169 NESLRLLPKCNHAFHVPCIDTWLKSHSNCPLC 200
>AT3G18773.1 | chr3:6466304-6466966 FORWARD LENGTH=221
Length = 220
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 20/32 (62%)
Query: 111 GETVRALPCCPHAFHARCVDAWLRLRPTCPLC 142
GE +R LP C H FH RC+D WL TCP C
Sbjct: 140 GEQLRVLPKCNHGFHLRCIDKWLTQHMTCPKC 171
>AT4G28890.1 | chr4:14256437-14257735 REVERSE LENGTH=433
Length = 432
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 20/31 (64%)
Query: 112 ETVRALPCCPHAFHARCVDAWLRLRPTCPLC 142
E +R LP C HAFH C+D WL TCPLC
Sbjct: 134 EILRLLPKCRHAFHIGCIDQWLEQHATCPLC 164
>AT2G27940.1 | chr2:11897963-11898742 FORWARD LENGTH=238
Length = 237
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 21/32 (65%)
Query: 111 GETVRALPCCPHAFHARCVDAWLRLRPTCPLC 142
GETV+ +P C H FH CVD WL TCPLC
Sbjct: 150 GETVKVIPHCGHVFHVDCVDTWLSSYVTCPLC 181
>AT4G09120.1 | chr4:5813998-5815035 FORWARD LENGTH=346
Length = 345
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 21/31 (67%)
Query: 112 ETVRALPCCPHAFHARCVDAWLRLRPTCPLC 142
ET+R +P C H FHA C+D WL TCP+C
Sbjct: 134 ETLRWMPPCSHTFHANCIDVWLSSWSTCPVC 164
>AT2G46493.1 | chr2:19080254-19081242 REVERSE LENGTH=185
Length = 184
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 22/31 (70%)
Query: 112 ETVRALPCCPHAFHARCVDAWLRLRPTCPLC 142
ETVR +P C H FH C+D WL++ +CPLC
Sbjct: 149 ETVRFIPECDHCFHVECIDVWLKIHGSCPLC 179
>AT2G20030.1 | chr2:8647813-8648985 FORWARD LENGTH=391
Length = 390
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 20/31 (64%)
Query: 112 ETVRALPCCPHAFHARCVDAWLRLRPTCPLC 142
E +R LP C HAFH C+D WL TCPLC
Sbjct: 135 EILRLLPKCRHAFHIGCIDQWLEQHATCPLC 165
>AT4G09130.1 | chr4:5815849-5816922 FORWARD LENGTH=358
Length = 357
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 21/31 (67%)
Query: 112 ETVRALPCCPHAFHARCVDAWLRLRPTCPLC 142
E +R +P C H FHA C+D WL R TCP+C
Sbjct: 131 EPLRWMPPCSHTFHANCIDEWLSSRSTCPVC 161
>AT1G72220.1 | chr1:27184388-27185629 REVERSE LENGTH=414
Length = 413
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 20/31 (64%)
Query: 112 ETVRALPCCPHAFHARCVDAWLRLRPTCPLC 142
E++R LP C HAFH C+D WL CPLC
Sbjct: 188 ESLRLLPKCNHAFHISCIDTWLSSHTNCPLC 218
>AT3G48030.1 | chr3:17725410-17727954 REVERSE LENGTH=350
Length = 349
Score = 46.2 bits (108), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 20/31 (64%)
Query: 112 ETVRALPCCPHAFHARCVDAWLRLRPTCPLC 142
+ +R LP C HAFH C+D WL TCPLC
Sbjct: 218 DKLRLLPVCSHAFHLHCIDTWLLSNSTCPLC 248
>AT2G18650.1 | chr2:8086860-8088131 REVERSE LENGTH=424
Length = 423
Score = 46.2 bits (108), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 20/31 (64%)
Query: 112 ETVRALPCCPHAFHARCVDAWLRLRPTCPLC 142
+ +R LP C HAFH C+D WL TCPLC
Sbjct: 137 DKLRLLPKCSHAFHVECIDTWLLSHSTCPLC 167
>AT2G47560.1 | chr2:19511934-19512617 REVERSE LENGTH=228
Length = 227
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 19/28 (67%)
Query: 115 RALPCCPHAFHARCVDAWLRLRPTCPLC 142
R LP C H+FH C+D W R R TCPLC
Sbjct: 122 RLLPKCGHSFHVDCIDTWFRSRSTCPLC 149
>AT3G05200.1 | chr3:1477377-1478573 FORWARD LENGTH=399
Length = 398
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 21/31 (67%)
Query: 112 ETVRALPCCPHAFHARCVDAWLRLRPTCPLC 142
ET+R LP C H FH C+DAWL TCP+C
Sbjct: 139 ETLRLLPKCDHVFHPHCIDAWLEAHVTCPVC 169
>AT5G36001.1 | chr5:14142050-14143143 FORWARD LENGTH=323
Length = 322
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 22/31 (70%)
Query: 112 ETVRALPCCPHAFHARCVDAWLRLRPTCPLC 142
ETV+ LP C H FH C+D WL+L +CP+C
Sbjct: 275 ETVKCLPECEHCFHTECIDPWLKLHNSCPVC 305
>AT1G80400.1 | chr1:30225864-30227360 FORWARD LENGTH=408
Length = 407
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 112 ETVRALPCCPHAFHARCVDAWLRLRPTCPLC 142
E VR LPC H FH CVD WL++ TCPLC
Sbjct: 366 EQVRELPC-SHVFHVDCVDKWLKINATCPLC 395
>AT2G35000.1 | chr2:14751809-14752945 REVERSE LENGTH=379
Length = 378
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 21/31 (67%)
Query: 112 ETVRALPCCPHAFHARCVDAWLRLRPTCPLC 142
ET+R +P C H FHA CVD WL TCPLC
Sbjct: 146 ETLRLMPPCCHVFHADCVDVWLSEHSTCPLC 176
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.329 0.142 0.459
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 1,925,651
Number of extensions: 41132
Number of successful extensions: 412
Number of sequences better than 1.0e-05: 52
Number of HSP's gapped: 423
Number of HSP's successfully gapped: 52
Length of query: 166
Length of database: 11,106,569
Length adjustment: 91
Effective length of query: 75
Effective length of database: 8,611,713
Effective search space: 645878475
Effective search space used: 645878475
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 108 (46.2 bits)