BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0212400 Os01g0212400|AK066468
(584 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G53210.1 | chr1:19844790-19847533 FORWARD LENGTH=586 617 e-177
AT1G29020.1 | chr1:10120497-10122902 REVERSE LENGTH=565 237 1e-62
AT2G34030.1 | chr2:14375086-14377364 REVERSE LENGTH=567 201 1e-51
AT1G29025.1 | chr1:10124524-10126875 REVERSE LENGTH=579 199 5e-51
AT2G34020.1 | chr2:14371292-14373703 REVERSE LENGTH=611 196 3e-50
>AT1G53210.1 | chr1:19844790-19847533 FORWARD LENGTH=586
Length = 585
Score = 617 bits (1592), Expect = e-177, Method: Compositional matrix adjust.
Identities = 303/524 (57%), Positives = 387/524 (73%), Gaps = 8/524 (1%)
Query: 68 EEKCEQSYGFLPCTTTVLGNLFLVLAYGFLMYKAATFLSAGSELLLEIMXXXXXXXXXXX 127
EE CEQ+YGF+PCT T LGN+FL+L YGFLM+ AAT+LSAGSELLLEI+
Sbjct: 63 EEACEQTYGFMPCTKTALGNVFLILVYGFLMFTAATYLSAGSELLLEILGPGIVGGLFLP 122
Query: 128 XXXXXXXXXXXXXXXXXXXRETAQSQVLIGMGLLAGSTVFLLTLLWGTCVVVGKCDIGPN 187
TAQSQV +GMGLLAGSTV LLT++WGTC VVGKCD+ +
Sbjct: 123 MLGALPDAMLIMVSGLSGDAATAQSQVSVGMGLLAGSTVMLLTVIWGTCTVVGKCDL-RD 181
Query: 188 GVAVDLQNNKGFSLTGTGISTDVQTSYAARIMGISVIPFIIAQFPKMLKTHHGQRLAVLL 247
+AV+ Q+ KGF L +G++ D+ TSYAARIM ISVIPF+I Q P+ML + G++L+VL+
Sbjct: 182 SIAVNNQDTKGFHLKDSGVTVDIWTSYAARIMAISVIPFVIVQLPQMLGSTSGRQLSVLI 241
Query: 248 ALIVSFSLVLAYCLYQVFQPWIQKRKLAYAKHKHVISGILRHAQMEALGRLLNEDGTPNE 307
ALI+S ++++YC+YQVFQPWIQ+R+LA+AKHKHVISGILRH + ALGRLL+++G P+E
Sbjct: 242 ALILSVLMLISYCVYQVFQPWIQRRRLAFAKHKHVISGILRHLKQHALGRLLDDEGQPDE 301
Query: 308 DVIKKLFHKIDMDESQTLSRAELHALIIGINFEEVDFDKNDAVDKIMDDFDTSGNDIVEE 367
VI+KLF ID + LS AEL ALIIGI+FE++DFDK+DAV K++ DFD + ++ V++
Sbjct: 302 HVIRKLFLTIDANNDGHLSAAELKALIIGISFEDIDFDKDDAVGKVLQDFDKTLDEQVDQ 361
Query: 368 AEFVSGMKRWLNEA---KRSVPTSGAYSNKFITDYHARTRQEHDLLVD----RSDETVES 420
EFV G+K+WL +A S P +G + KF+ ++H +T++EH LL D +DE
Sbjct: 362 EEFVRGIKQWLIQAMGGAPSGPEAGPRTMKFLDNFHVQTKREHALLGDNENGENDEEGGE 421
Query: 421 VENPGWCITKXXXXXXXXXXXXXXXXDPLVDAVHNFSNASHIPSFFISFIALPLATNSSE 480
V +P W K DPLVD V+NFS A+ IPSFFISFIALPLATNSSE
Sbjct: 422 VADPKWITIKAALLLLLGAAIAAAFADPLVDTVNNFSAATGIPSFFISFIALPLATNSSE 481
Query: 481 AVSAIIFASRKKLRTSSLTFSEVYGGVTMNNTLCLGVFLALIYIRNLTWDFSSEVLIILL 540
AVSAIIFASRKK+RT+SLTFSE+ GGVTMNN LCL VFLA++Y+R LTW+FSSEVL+IL+
Sbjct: 482 AVSAIIFASRKKIRTASLTFSELCGGVTMNNILCLSVFLAIVYVRGLTWNFSSEVLVILI 541
Query: 541 VCVIMGLFTSFRTTFPLWTCLVAYMLYPLSLVVVYILDFVFGWS 584
VC++MG F SFRTT+PLWTC +AY+LYP SL +VYILD+ FGWS
Sbjct: 542 VCLVMGGFASFRTTYPLWTCFIAYLLYPFSLGLVYILDYWFGWS 585
>AT1G29020.1 | chr1:10120497-10122902 REVERSE LENGTH=565
Length = 564
Score = 237 bits (604), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 150/508 (29%), Positives = 246/508 (48%), Gaps = 24/508 (4%)
Query: 71 CEQSYGFLPCTTTVLGNLFLVLAYGFLMYKAATFLSAGSELLLEIMXXXXXXXXXXXXXX 130
C Y FLPC V G +F V ++G ++ FL+ G L I
Sbjct: 62 CVHVYDFLPCADNVAGYVFQVFSFGCILIIGEYFLTKGRTKLFLIFEVGFYGGIIFPLLT 121
Query: 131 XXXXXXXXXXXXXXXXRETAQSQVLIGMGLLAGSTVFLLTLLWGTCVVVGKCDIGPNGVA 190
RE A S+V +G+ G +VF LT+ WG C++ G P
Sbjct: 122 MFPRIALILSTGLVGSREMASSRVGNIIGVTVGYSVFALTIQWGACILFGLSGTKPE--- 178
Query: 191 VDLQNNKGFSLTGTGISTDVQTSYAARIMGISVIPFIIAQFPKMLKTHHGQRLAVLLALI 250
+ L+ + D+ +A IM ++++PFI+ F ++ + + + VL+ LI
Sbjct: 179 ------QPIDLSAASVEADITNKKSAGIMLLTILPFILVTFSEISSSQYWNDIIVLITLI 232
Query: 251 VSFSLVLAYCLYQVFQPWIQKRKLAYAKHKHVISGILRHAQMEALGRLLNEDGTPNEDVI 310
+S S AY Y F Q + L +A+ + ++S + +H Q+ + L+ DG N++ +
Sbjct: 233 ISASATFAYFFYSYFDRDDQAKSLDHARFE-LMSEVHKHLQIFSPKSLI-RDGQLNQESL 290
Query: 311 KKLFHKIDMDESQTLSRAELHALIIGINF-EEVDFDKNDAVDKIMDDFDTSGNDIVEEAE 369
K+LF KID + + AEL L + V + V ++DDFD G+ ++EAE
Sbjct: 291 KRLFQKIDANGDGKIQVAELKDLTVEFGMIGRVKCHIDKLVHTLVDDFDRDGDREIDEAE 350
Query: 370 FVSGMKRWLNEAKRSVPTSGAYSNKFITDYHARTRQEHDLLVDRSDETVESVENP--GWC 427
F G+K+WLN+ K S F T R Q + + + ++ +S+ W
Sbjct: 351 FEIGIKKWLNQYKFS----------FDTTVPPREDQAEGVPILKVEKPEQSLVKKLLSWR 400
Query: 428 ITKXXXXXXXXXXXXXXXXDPLVDAVHNFSNASHIPSFFISFIALPLATNSSEAVSAIIF 487
+ P + + S ++ +PSF++ F+ +PLA N +SA
Sbjct: 401 TLRASLEVILGMLVVIYLARPFMMNIQLLSESAGVPSFYVVFVVIPLARNLKNTLSAHFC 460
Query: 488 ASRKKLRTSSLTFSEVYGGVTMNNTLCLGVFLALIYIRNLTWDFSSEVLIILLVCVIMGL 547
+ K + +S TFSE+Y VTMNN + + + LA++Y R L WD+++EVLII++V +++GL
Sbjct: 461 RKKDKAKITSDTFSEIYKDVTMNNLMGISIILAIVYARELVWDYTTEVLIIVIVGLLIGL 520
Query: 548 FTSFRTTFPLWTCLVAYMLYPLSLVVVY 575
RTT+P W CL+A+ LY +SLVVVY
Sbjct: 521 PAYVRTTYPFWICLLAFALYFISLVVVY 548
>AT2G34030.1 | chr2:14375086-14377364 REVERSE LENGTH=567
Length = 566
Score = 201 bits (510), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 151/518 (29%), Positives = 242/518 (46%), Gaps = 34/518 (6%)
Query: 71 CEQSYGFLPCTTTVLGNLFLVLAYGFLMYKAATFLSAGSELLLEIMXXXXXXXXXXXXXX 130
C YGFLPC V G +F V ++G L+ FLS G L I
Sbjct: 63 CVHVYGFLPCADNVEGYIFQVFSFGSLLIIGDYFLSEGRSKLFVIFEVGFYGGIIFPLLT 122
Query: 131 XXXXXXXXXXXXXXXXRETAQSQVLIGMGLLAGSTVFLLTLLWGTCVV---VGKCDIGPN 187
R+ A S + +GL G TVF LT+ WG CVV G +
Sbjct: 123 MFPRIALMLSTGLSLSRDVASSFIDDNVGLTVGHTVFSLTIQWGACVVFSITGPRSDQAD 182
Query: 188 GVAVDLQNNKGFSLTGTGISTDVQTSYAARIMGISVIPFIIAQFPKMLKTHHGQRLAVLL 247
G+ L+ KGF + D + AA IM +S+ PF++ F + +H + VL+
Sbjct: 183 GLIEKLKILKGF--VEARVEADPKNKKAAGIMLLSLSPFLMVTFSAIFDSHSWSHIIVLI 240
Query: 248 ALIVSFSLVLAYCLYQVFQPWIQKRKLAYAKHKHVISGILRHAQMEALGRLLNEDGTPNE 307
LI+S S + Y +Y Q++ L +A+ + ++S + +H + + L+ +DG ++
Sbjct: 241 TLIISSSSTVVYFVYSYLDTANQEKSLDHARFE-LMSEVHKHLKRFSPKHLI-KDGELSK 298
Query: 308 DVIKKLFHKIDMDESQTLSRAELHALIIGI-NFEEVDFDKNDAVDKIMDDFDTSGNDIVE 366
+ +K LF K D ++ + +EL L I + NF + +D N+ ++DFD + +E
Sbjct: 299 ESLKSLFKKTDKNKDGKIQISELKDLTIELSNFGRMRYDINELAKAFLEDFDGDNDGELE 358
Query: 367 EAEFVSGMKRWLNEAKRSVPTSGAYSNKFITDYHARTRQEHDLLVDRSDETVESVENPGW 426
E EF G+ R L + K +V D +E+ +L +E ++
Sbjct: 359 ENEFEEGIARLLKQYKFNVE-----------DQRENQTEENGVL------KLE-IKPKKT 400
Query: 427 CITKXXXXXXXXXXXXXXX--------XDPLVDAVHNFSNASHIPSFFISFIALPLATNS 478
+TK P + + S ++ IPSF+I F +P A N
Sbjct: 401 LVTKLLSMETLIATTEVIVGILIVLFLAKPFMLNIQLLSISAGIPSFYIVFAMIPFARNL 460
Query: 479 SEAVSAIIFASRKKLRTSSLTFSEVYGGVTMNNTLCLGVFLALIYIRNLTWDFSSEVLII 538
+S + K R SS TFSE+Y +TMNN L + V LA++Y R LTW +S E LI+
Sbjct: 461 KNTLSTRFCRGKDKKRVSSNTFSEIYKDITMNNLLGMSVILAIVYTRGLTWKYSVETLIM 520
Query: 539 LLVCVIMGLFTSFRTTFPLWTCLVAYMLYPLSLVVVYI 576
++V +I+GL R+T+P W C++A+ +Y SL+++YI
Sbjct: 521 VIVGLIIGLPIYIRSTYPFWMCVLAFAMYFFSLLLIYI 558
>AT1G29025.1 | chr1:10124524-10126875 REVERSE LENGTH=579
Length = 578
Score = 199 bits (505), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 154/531 (29%), Positives = 244/531 (45%), Gaps = 41/531 (7%)
Query: 68 EEKCEQSYGFLPCTTTVLGNLFLVLAYGFLMYKAATFLSAGSELLLEIMXXXXXXXXXXX 127
E C YGFLPC + G +F V ++G L+ FLS G L I
Sbjct: 59 ESACVHVYGFLPCADNIEGYVFQVFSFGCLLIIGEYFLSKGRSKLFVIFEVGFFGGIIFP 118
Query: 128 XXXXXXXXXXXXXXXXXXXRETAQSQVLIGMGLLAGSTVFLLTLLWGTCVVVG------- 180
RE A S + + G +VF LT+ WG CVV G
Sbjct: 119 LLTMFPRIALILSTGLIGSREIANSMTGNNVAVTVGYSVFALTMQWGACVVFGLSGLRSD 178
Query: 181 ----KCDIGPNGVAVDLQNNKGFSLTGTGISTDVQTSYAARIMGISVIPFIIAQFPKMLK 236
CDI V N +L G I D + AA IM ++++PF++ F +
Sbjct: 179 DQSITCDISSPRRQVKKSINLLKNLAGASIRADPKNKKAAGIMLLTLLPFVLVTFSETFH 238
Query: 237 THHGQRLAVLLALIVSFSLVLAYCLYQVFQPWIQKRKLAYAKHKHVISGILRHAQMEALG 296
VL+ LI S S + Y +Y F Q + L YAK + ++S + +H Q +
Sbjct: 239 IKSWDDNMVLVTLIFSGSATVLYFVYLYFDKADQVKSLEYAKFE-LMSEVHKHLQNFSPQ 297
Query: 297 RLLNEDGTPNEDVIKKLFHKIDMDESQTLSRAELHALIIGIN-FEEVDFDKNDAVDKIMD 355
L+ +G ++ +K LF K D+++ + +EL L + V D N+ ++
Sbjct: 298 SLI-RNGQLCQESLKSLFKKFDVNKDGKIQVSELKDLTVDFGVLGRVKCDINELATTLLA 356
Query: 356 DFDTSGNDIVEEAEFVSGMKRWLNEAKRSVPTSGAYSNKFITDYHARTRQEHDLLVDRSD 415
DFD++ + ++E EF G+++WL + K S ++ Q D+ D
Sbjct: 357 DFDSNRDGEIDETEFAIGIEKWLKQYKFS--------------FNGTESQGEDI---AED 399
Query: 416 ETVESVEN--PGWCITKXXXXXXXXX--------XXXXXXXDPLVDAVHNFSNASHIPSF 465
+ V VE G TK P + + S ++ +PSF
Sbjct: 400 DGVLKVEQLLKGCLFTKLLTKRTLKAVIEVIIGITIVSFLAMPFMMNIELLSVSAGVPSF 459
Query: 466 FISFIALPLATNSSEAVSAIIFASRKKLRTSSLTFSEVYGGVTMNNTLCLGVFLALIYIR 525
++ F +PLA N A+SA ++K + +S TFSE+Y VT+NN L + + LA++YIR
Sbjct: 460 YVVFAVIPLARNLKNALSAHFCRKKEKAKITSDTFSEIYRDVTLNNLLGITIILAIVYIR 519
Query: 526 NLTWDFSSEVLIILLVCVIMGLFTSFRTTFPLWTCLVAYMLYPLSLVVVYI 576
LTWD+S+EVLII++V +I+G+ R+T+P W C++A+ LY SL+++Y+
Sbjct: 520 GLTWDYSTEVLIIVIVGLIIGVPAYVRSTYPFWICVLAFALYFFSLILIYL 570
>AT2G34020.1 | chr2:14371292-14373703 REVERSE LENGTH=611
Length = 610
Score = 196 bits (498), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 146/536 (27%), Positives = 242/536 (45%), Gaps = 38/536 (7%)
Query: 71 CEQSYGFLPCTTTVLGNLFLVLAYGFLMYKAATFLSAGSELLLEIMXXXXXXXXXXXXXX 130
C YGFLPC + G +F V ++G L+ FLS G L I
Sbjct: 75 CIHVYGFLPCADNIGGYVFQVFSFGCLLIIGDYFLSQGRSKLFVIFEVGFYGGIVFPLLT 134
Query: 131 XXXXXXXXXXXXXXXXRETAQSQVLIGMGLLAGSTVFLLTLLWGTCVVVGKCDIGPNG-- 188
E A V +G+ G T+F LT+ WG CV+ G PN
Sbjct: 135 MFPRIALMISPGLAATHEGALMIVGNNVGVTIGHTIFALTMQWGACVIFGLTS--PNSDP 192
Query: 189 ---------VAVDLQN-NKGF-------SLTGTGISTDVQTSYAARIMGISVIPFIIAQF 231
+ D +N +GF S+ + D + AA IM ++++PF++
Sbjct: 193 SIRRGSIKRTSSDTKNPRRGFYRMKILKSVVEASVDADPKNKKAAGIMLLTLVPFLLVTL 252
Query: 232 PKMLKTHHGQRLAVLLALIVSFSLVLAYCLYQVFQPWIQKRKLAYAKHKHVISGILRHAQ 291
P +L + +L+ LI+S S Y +Y F QK+ L +AK + ++S + +H Q
Sbjct: 253 PDLLDVQSWSDIIMLITLIISCSSTFIYFVYSYFDTADQKKSLDHAKFE-LMSEVHKHLQ 311
Query: 292 MEALGRLLNEDGTPNEDVIKKLFHKIDMDESQTLSRAELHALIIGIN-FEEVDFDKNDAV 350
+ R L DG +++ +K LF KID ++ + +EL L + F ++ D N+
Sbjct: 312 SFS-PRTLIRDGQLSKESLKSLFDKIDRNKDGKIQISELKDLTVEFGVFGKMKCDINEFA 370
Query: 351 DKIMDDFDTSGNDIVEEAEFVSGMKRWLNEAKRSVPTSGAYSNKFITDYHARTRQEHDLL 410
++ +FD N ++E EF G+ + LN K S +N +I RT +
Sbjct: 371 STLLAEFDKDKNGELDENEFEEGIMKLLNHYKFDNQESPRQNNTYIY----RTPSDSVKS 426
Query: 411 VDRSDET-VESVENPGWCIT---------KXXXXXXXXXXXXXXXXDPLVDAVHNFSNAS 460
+ + +E V +E P + + P + + S ++
Sbjct: 427 LSQGEEAGVLKLEMPKQTLVAKFLSMSTLRAVTKVIGGMLIVVFLAKPFMVNIGLLSVSA 486
Query: 461 HIPSFFISFIALPLATNSSEAVSAIIFASRKKLRTSSLTFSEVYGGVTMNNTLCLGVFLA 520
+PSF+ F +PL N +SA + K R +S FSE+Y VTMNN + + + LA
Sbjct: 487 GVPSFYSVFAVIPLVRNLKNTLSAHFCRKKDKARIASEKFSEIYRDVTMNNLMGMSITLA 546
Query: 521 LIYIRNLTWDFSSEVLIILLVCVIMGLFTSFRTTFPLWTCLVAYMLYPLSLVVVYI 576
++Y R L W++S E L++++V + +GL R+T+P W C++A+ +Y SLV++YI
Sbjct: 547 IVYSRGLKWEYSIESLLVVVVGIAIGLPAYVRSTYPFWICVMAFAMYIFSLVLIYI 602
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.324 0.138 0.409
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 9,939,499
Number of extensions: 375653
Number of successful extensions: 1449
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 1434
Number of HSP's successfully gapped: 8
Length of query: 584
Length of database: 11,106,569
Length adjustment: 104
Effective length of query: 480
Effective length of database: 8,255,305
Effective search space: 3962546400
Effective search space used: 3962546400
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 114 (48.5 bits)