BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0203800 Os01g0203800|AK100265
(520 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G53380.1 | chr1:19913341-19914702 REVERSE LENGTH=454 259 2e-69
AT3G14870.1 | chr3:5004159-5005586 FORWARD LENGTH=476 246 3e-65
AT1G29300.1 | chr1:10248120-10249499 REVERSE LENGTH=460 230 1e-60
AT2G45260.1 | chr2:18664661-18665938 REVERSE LENGTH=426 187 2e-47
AT3G60680.1 | chr3:22430246-22431745 FORWARD LENGTH=500 143 3e-34
AT5G58960.1 | chr5:23805799-23808360 FORWARD LENGTH=560 100 3e-21
AT4G34080.1 | chr4:16326985-16327797 FORWARD LENGTH=271 93 3e-19
AT4G33320.1 | chr4:16057038-16057916 REVERSE LENGTH=293 92 5e-19
AT2G30380.1 | chr2:12948284-12950573 FORWARD LENGTH=520 80 3e-15
AT2G32130.1 | chr2:13654996-13655469 REVERSE LENGTH=158 60 4e-09
>AT1G53380.1 | chr1:19913341-19914702 REVERSE LENGTH=454
Length = 453
Score = 259 bits (663), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 161/400 (40%), Positives = 206/400 (51%), Gaps = 27/400 (6%)
Query: 126 DSLLANLFAGVSAVKAAYAQLQLAQFPYDXXXXXXXXXXXXXELTRLSDTKRRYLR---D 182
++LLA LFA VS++KAAYAQLQ +Q PYD EL LS+ K+ +++ D
Sbjct: 68 EALLAKLFATVSSIKAAYAQLQHSQSPYDSIGIQKADNLVVAELKTLSELKQCFMKKQVD 127
Query: 183 PXXXXXXXXXXXXXXXXXXXEEQRHLLKTYQITARKLEGELRAKEAEADRARSSX-XXXX 241
P +E R LLKTY+I +KLE + + K++E R
Sbjct: 128 PNPERTLVLAEI--------QELRSLLKTYEIMGKKLESQYKLKDSEIIFLREKLDESMK 179
Query: 242 XXXXXXXXXXHPGRTLASLDELHLSGLNPTHFLTALRHTVKSIRSFSKSMLNSMQSAGWD 301
G+ LD LHLS LNPTHF+T L HTVKS R F K M+ M+ AGWD
Sbjct: 180 QNKLTEKRLNQSGQLCNPLDNLHLSALNPTHFVTYLHHTVKSTRGFVKLMIEQMKLAGWD 239
Query: 302 LXXXXXXVHPGVQLRRAGDTKFVFESYVAMKMFANFHRRDFNLSFLXXXXXXXXXXXXXX 361
+ +HPGV + F FE +V+ MF FH F+ S
Sbjct: 240 ISSAANSIHPGVFYYKQDHKCFTFEHFVSNVMFEAFHLPYFSTSSESRSYKKKKQSNADR 299
Query: 362 XT------ELKAAPASAFLDARNARWGGFGKFLRAKYLSLVHARMETAFFGRLEQRGIVS 415
EL++ A +L AR F +F RAKYL L+H +ME AFFG L R VS
Sbjct: 300 EMFFERFKELRSMKAKDYLTARPK--SRFARFCRAKYLQLIHPKMEQAFFGHLHLRNQVS 357
Query: 416 AGPGFPESSWFADFAEMARRVWLLHCLFYAFDGGAEEDGASIFQVRTGARFSEVYMESVS 475
AG FPE+S F+ F EMA+R+WLLHCL +F+ AE IF+V G RFSEVYM+SV+
Sbjct: 358 AG-EFPETSLFSGFLEMAKRIWLLHCLALSFEREAE-----IFRVPKGCRFSEVYMKSVA 411
Query: 476 -DGRSDXXXXXXXXXRVVGFTVVPGFRVGRTMIQCRVYLS 514
+ V FTVVPGFR+G+T IQC VYLS
Sbjct: 412 EEAFFPAAESSPESEPRVAFTVVPGFRIGKTSIQCEVYLS 451
>AT3G14870.1 | chr3:5004159-5005586 FORWARD LENGTH=476
Length = 475
Score = 246 bits (627), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 155/405 (38%), Positives = 202/405 (49%), Gaps = 24/405 (5%)
Query: 123 VAKDSLLANLFAGVSAVKAAYAQLQLAQFPYDXXXXXXXXXXXXXELTRLSDTKRRYLR- 181
+A ++LLA LFA +S++K+ YAQLQ AQ PYD EL LS+ K+ +L+
Sbjct: 83 LAMEALLAKLFATISSIKSGYAQLQYAQSPYDPNGIQKADNLVVAELKTLSELKQSFLKK 142
Query: 182 --DPXXXXXXXXXXXXXXXXXXXEEQRHLLKTYQITARKLEGELRAKEAEADRARSS-XX 238
DP +E R +LKTY+I +KLE +L+ K++E +
Sbjct: 143 QLDPNPDRTLVLAEI--------QELRSVLKTYEIMGKKLECQLKLKDSEIIFLKEKFQE 194
Query: 239 XXXXXXXXXXXXXHPGRTLASLD-ELHLSGLNPTHFLTALRHTVKSIRSFSKSMLNSMQS 297
G+ LD LHLS ++ THF+T L HTVKSIR F K M+ M+
Sbjct: 195 SMTQNKLMEKRLNQSGQLCNPLDHNLHLSAVSSTHFVTYLHHTVKSIRGFVKLMVEQMKL 254
Query: 298 AGWDLXXXXXXVHPGVQLRRAGDTKFVFESYVAMKMFANFHRRDFNLSFLXXXXXXXXXX 357
A WD+ + P V + F E YV M F F+
Sbjct: 255 AAWDIDMAAELIQPDVLYYKQDHKCFALEHYVCKIMLEAFQLPYFSNESSKKTSREDKAM 314
Query: 358 XXXXXTELKAAPASAFLDARNARWGGFGKFLRAKYLSLVHARMETAFFGRLEQRGIVSAG 417
TEL++ +L +R KF R KYL L+H +ME AFFG L QR V+AG
Sbjct: 315 FFERFTELRSMKPREYLASRPK--SRLAKFCRTKYLQLIHPKMEQAFFGHLHQRNQVTAG 372
Query: 418 PGFPESSWFADFAEMARRVWLLHCLFYAFDGGAEEDGASIFQVRTGARFSEVYMESVSDG 477
FPE+S F EMA+RVWLLHCL ++FD ASIFQV G RFSEVYM+SVS+
Sbjct: 373 E-FPETSLCTAFLEMAKRVWLLHCLAFSFDP-----EASIFQVSRGCRFSEVYMKSVSEE 426
Query: 478 ---RSDXXXXXXXXXRVVGFTVVPGFRVGRTMIQCRVYLSRPGRR 519
+ V FTVVPGFR+G+T IQC VYLSR +R
Sbjct: 427 AFFSPEQEESSSETEPGVAFTVVPGFRIGKTTIQCEVYLSRSCQR 471
>AT1G29300.1 | chr1:10248120-10249499 REVERSE LENGTH=460
Length = 459
Score = 230 bits (586), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 137/394 (34%), Positives = 202/394 (51%), Gaps = 34/394 (8%)
Query: 127 SLLANLFAGVSAVKAAYAQLQLAQFPYDXXXXXXXXXXXXXELTRLSDTKRRYLRDPXXX 186
+++A +FA +++KAAYA+LQ+AQ PYD EL LS+ KR +LR
Sbjct: 87 AVVAKIFASTTSIKAAYAELQMAQRPYDNDAIQAADTAVVEELRALSELKRSFLRKELNL 146
Query: 187 XXXXXXXXXXXXXXXXEEQRHLLKTYQITARKLEGELRAKEAEADRARSSXXXXXXXXXX 246
+EQ+ L++TY+IT +KLE E+ K+ + D + S
Sbjct: 147 SPQVAIMLAEI-----QEQQSLMRTYEITIKKLEFEVTEKQLKIDELKMSFEESLVVNKS 201
Query: 247 XXXXXHPGRTLASLDELHLSGLNPTHFLTALRHTVKSIRSFSKSMLNSMQSAGWDLXXXX 306
+++ D + + LN + F+ L T++S+RSF K ++ M+SA WDL
Sbjct: 202 LEKKLSASGSVSVFDNIEIRNLNLSSFVQVLGFTLRSVRSFVKLIVKEMESASWDLDAAA 261
Query: 307 XXV------HPGVQLRRAGDTKFVFESYVAMKMFANFHRRDFNLSFLXXXXXXXXXXXXX 360
+ R F FES+V KMF NF DF+
Sbjct: 262 SAAVSVNVKNASTVFARPSHRCFAFESFVCGKMFENFGAPDFS--------------RRE 307
Query: 361 XXTELKAAPASAFLDARNARWGGFGKFLRAKYLSLVHARMETAFFGRLEQRGIVSAGPGF 420
+L++ +L RN F +F+ KYLS+VHA+ME +FFG L QR +V++G GF
Sbjct: 308 EFEKLRSVDPIQYL-TRNP-GSSFARFVVHKYLSVVHAKMECSFFGNLNQRKLVNSG-GF 364
Query: 421 PESSWFADFAEMARRVWLLHCLFYAFDGGAEEDGASIFQVRTGARFSEVYMESVSDGRSD 480
P+S +FA F EMA+R+WLLHCL ++ G ++FQ++ G RFS+VYMESV G
Sbjct: 365 PDSGFFATFCEMAKRIWLLHCLAFSLSG-----NVTVFQLKRGCRFSQVYMESVKSGDES 419
Query: 481 XXXXXXXXXRVVGFTVVPGFRVGRTMIQCRVYLS 514
R VGFTVVPGF++G +IQ +VYL+
Sbjct: 420 LFSGDNSDIR-VGFTVVPGFKIGENVIQSQVYLT 452
>AT2G45260.1 | chr2:18664661-18665938 REVERSE LENGTH=426
Length = 425
Score = 187 bits (474), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 118/402 (29%), Positives = 191/402 (47%), Gaps = 28/402 (6%)
Query: 124 AKDSLLANLFAGVSAVKAAYAQLQLAQFPYDXXXXXXXXXXXXXELTRLSDTKRRYLRDP 183
A ++L++NLF +S++K+AY +LQ A PYD EL LS+ K Y +
Sbjct: 35 AMEALISNLFGNISSLKSAYIELQSAHTPYDPEKIQAADKVVISELKNLSEMKHFYREN- 93
Query: 184 XXXXXXXXXXXXXXXXXXXEEQRHLLKTYQITARKLEGELRAKEAEA-------DRARSS 236
+EQ+ LLKTY++ +K + E++ K++E + A
Sbjct: 94 -NPKPVCVSPQDSRLAAEIQEQQSLLKTYEVMVKKFQSEIQNKDSEITQMLQKIEEANQK 152
Query: 237 XXXXXXXXXXXXXXXHPGRTLASLDELHLSGLNPTHFLTALRHTVKSIRSFSKSMLNSMQ 296
+ G + L +++ K++ FSK ++N M+
Sbjct: 153 RLKLEKNLKLRGMSTNEGSN--GDGNMQFPDLTTELYVSTYEAAAKAVHDFSKPLINMMK 210
Query: 297 SAGWDLXXXXXXVHPGVQLRRAGDTKFVFESYVAMKMFANFHRRDFNLSFLXXXXXXXXX 356
+AGWDL + P V + K+ FESY+ +MF+ F +++F+++
Sbjct: 211 AAGWDLDSAANSIEPDVVYAKRPHKKYAFESYICQRMFSGFQQKNFSVN----SESAAVM 266
Query: 357 XXXXXXTELKAAPASAFLDARNARW----GGFGKFLRAKYLSLVHARMETAFFGRLEQRG 412
T + A +D +A FG F R+KYL LVH +ME +FFG L+QR
Sbjct: 267 ANDDTDTFFRQFLALKDMDPLDALGTNPDSNFGIFCRSKYLLLVHPKMEASFFGNLDQRD 326
Query: 413 IVSAGPGFPESSWFADFAEMARRVWLLHCLFYAFDGGAEEDGASIFQVRTGARFSEVYME 472
V+ G G P ++++ F ++A+ +W+LH L Y+FD A+ IFQV+ G+ FS+ YME
Sbjct: 327 YVTGG-GHPRTAFYQAFLKLAKSIWILHRLAYSFDPAAK-----IFQVKKGSEFSDSYME 380
Query: 473 SVSDGRSDXXXXXXXXXRVVGFTVVPGFRVGRTMIQCRVYLS 514
SV + VG V+PGF +G ++IQ RVY+S
Sbjct: 381 SVV---KNIVVDEKEENPRVGLMVMPGFWIGGSVIQSRVYVS 419
>AT3G60680.1 | chr3:22430246-22431745 FORWARD LENGTH=500
Length = 499
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 103/389 (26%), Positives = 166/389 (42%), Gaps = 15/389 (3%)
Query: 127 SLLANLFAGVSAVKAAYAQLQLAQFPYDXXXXXXXXXXXXXELTRLSDTKRRYLRDPXXX 186
SL++++FA S+ +A+Y QLQ A P+ L +LSD K+ Y
Sbjct: 120 SLISSVFATASSFEASYLQLQAAHAPFVEENVKAADRALVSNLQKLSDLKQFYRNYRQSL 179
Query: 187 XXXXXXXXXXXXXXXXEEQRHLLKTYQITARKLEGELRAKEAEADRARSSXXXXXXXXXX 246
+E + L+ + + +L+ E+ AK+ + R+
Sbjct: 180 DFESDLAIGSCLESRVQENQSKLRALETVSNRLQAEMDAKDLQVWSLRNKLGEIQKSTSK 239
Query: 247 XXXXXHPGRTLASLDELHLSGLNPTHFLTALRHTVKSIRSFSKSMLNSMQSAGWDLXXXX 306
+SLD L L+ F + L K+ + F+K ++ M+ AGWDL
Sbjct: 240 LSKRLSSN---SSLDVL----LSVRVFESLLYDAFKATQKFTKILIELMEKAGWDLDLVA 292
Query: 307 XXVHPGVQLRRAGDTKFVFESYVAMKMFANFHRRDFNLSFLXXXXXXXXXXXXXXXTELK 366
VHP V + ++ SYV + MF F F+L+ ++
Sbjct: 293 KSVHPEVDYAKERHNRYALLSYVCLGMFRGFDGEGFDLNENDYEESERSSVDSSLRELMQ 352
Query: 367 AAPASAFLDARNARWGGFGKFLRAKYLSLVHARMETAFFGRL-EQRGIVSAGPGFPESSW 425
++ + F +F KY L+H M ++ F + E ++S+ S++
Sbjct: 353 HVSSNPMELLDRDKDCAFSRFCDKKYHELIHPNMASSIFSNMDENEAVLSSWRSL--STF 410
Query: 426 FADFAEMARRVWLLHCLFYAFDGGAEEDGASIFQVRTGARFSEVYMESVSDGRSDXXXXX 485
+ F MA +W LH L +FD E IFQV +G FS V+ME+V + D
Sbjct: 411 YESFVTMASSIWTLHKLALSFDPAVE-----IFQVESGVEFSIVFMENVLKRKQDKKFSM 465
Query: 486 XXXXRVVGFTVVPGFRVGRTMIQCRVYLS 514
VGFTVVPGF++G T+IQC+VYL+
Sbjct: 466 SPTRAKVGFTVVPGFKIGCTVIQCQVYLT 494
>AT5G58960.1 | chr5:23805799-23808360 FORWARD LENGTH=560
Length = 559
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 113/268 (42%), Gaps = 37/268 (13%)
Query: 270 PTHFLTALRHTVKSIRSFSKSMLNSMQSAGWDLXXXXXXVHPG----------------V 313
P F + ++ +SF+ +L+ M++A WD+ +
Sbjct: 301 PELFEMTMIQVKEASKSFTGILLSLMRAAHWDIAAAVRSIEAASASSDGMSASSFASSVQ 360
Query: 314 QLRRAGDTKFVFESYVAMKMFANFHRRDFNLSFLXXXXXXXXXXXXXXXTELKAAPASAF 373
KF ESY+ K+F F F + + K A
Sbjct: 361 SSVPNQHAKFALESYICRKIFQGFDHETFYMDGSLSSLINPDQYRRDCFAQFKDMKAMDP 420
Query: 374 LDARNA-RWGGFGKFLRAKYLSLVHARMETAFFGRLEQRGIVSAGPGFPESSWFADFAEM 432
++ FGKF KYLS++H +ME + FG EQR +V AG P S ++ +F +
Sbjct: 421 MELLGILPTCHFGKFCSKKYLSIIHQKMEESLFGDSEQRELVVAG-NHPRSQFYGEFLGL 479
Query: 433 ARRVWLLHCLFYAFDGGAEEDGASIFQVRTGARFSEVYMESV---SDGRSDXXXXXXXXX 489
A+ VWLLH L ++ D S F+ GA F YMESV SDGR
Sbjct: 480 AKAVWLLHLLAFSLD-----PSPSHFEANRGAEFHSQYMESVVRFSDGR-------VPAG 527
Query: 490 RVVGFTVVPGFRVGR----TMIQCRVYL 513
+VVGF V PGF++ ++I+ RVYL
Sbjct: 528 QVVGFPVCPGFKLSHQGKGSIIKSRVYL 555
>AT4G34080.1 | chr4:16326985-16327797 FORWARD LENGTH=271
Length = 270
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 100/227 (44%), Gaps = 11/227 (4%)
Query: 126 DSLLANLFAGVSAVKAAYAQLQLAQFPYDXXXXXXXXXXXXXELTRLSDTKRRYLRDPXX 185
++L++NLF +S++K+AY +LQ A PYD EL LS+ K Y +
Sbjct: 2 EALISNLFGNISSLKSAYIELQSAHTPYDPEKIQAADKVVISELKNLSEMKHFYREN--N 59
Query: 186 XXXXXXXXXXXXXXXXXEEQRHLLKTYQITARKLEGELRAKEAEA-------DRARSSXX 238
+EQ+ LLKTY++ +K + E++ K++E + A
Sbjct: 60 PKPVCVSPQDSRLAAEIQEQQSLLKTYEVMVKKFQSEIQNKDSEITQMLQKIEEANQKRL 119
Query: 239 XXXXXXXXXXXXXHPGRTLASLDELHLSGLNPTHFLTALRHTVKSIRSFSKSMLNSMQSA 298
+ G L L F++ K + FSK ++N M++A
Sbjct: 120 KLEKNLKLRGMSTNQGS--GGDGNLQFPDLTTELFVSTYEAAAKVVHDFSKPLINMMKAA 177
Query: 299 GWDLXXXXXXVHPGVQLRRAGDTKFVFESYVAMKMFANFHRRDFNLS 345
GWDL + P V + ++ FESY+ +MF+ F +++F+++
Sbjct: 178 GWDLDTAANSIEPDVVYAKRPHKEYAFESYICQRMFSGFQQKNFSVN 224
>AT4G33320.1 | chr4:16057038-16057916 REVERSE LENGTH=293
Length = 292
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 103/233 (44%), Gaps = 18/233 (7%)
Query: 124 AKDSLLANLFAGVSAVKAAYAQLQLAQFPYDXXXXXXXXXXXXXELTRLSDTKRRYLRDP 183
A ++L++NLF +S++K+AY +LQ A PYD EL LS+ K Y +
Sbjct: 11 AMEALISNLFGNISSLKSAYIELQSAHTPYDPEKIQAADKVVNSELKNLSEMKHSYREN- 69
Query: 184 XXXXXXXXXXXXXXXXXXXEEQRHLLKTY-QITARKLEGELRAKEAE----------ADR 232
+EQ+ LLKTY ++ +K + E++ K++E A++
Sbjct: 70 -NPKPVCVSPQDSRLAAEIQEQQSLLKTYYEVMVKKFQSEIQNKDSEITQMLQKIEEANK 128
Query: 233 ARSSXXXXXXXXXXXXXXXHPGRTLASLDELHLSGLNPTHFLTALRHTVKSIRSFSKSML 292
R G L L F++ K++ FSK ++
Sbjct: 129 KRLKLEKNLKLRGMSTNEGSGGDG-----NLQFPDLTTELFVSTYEVAAKAVHDFSKPLI 183
Query: 293 NSMQSAGWDLXXXXXXVHPGVQLRRAGDTKFVFESYVAMKMFANFHRRDFNLS 345
N M++AGWDL + P V + K+ FESY+ +MF+ F +++F+++
Sbjct: 184 NMMKAAGWDLDSAANSIEPDVVYAKRPHKKYAFESYICQRMFSGFQQKNFSVN 236
>AT2G30380.1 | chr2:12948284-12950573 FORWARD LENGTH=520
Length = 519
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 114/292 (39%), Gaps = 40/292 (13%)
Query: 126 DSLLANLFAGVSAVKAAYAQLQLAQFPYDXXXXXXXXXXXXXELTRLSDTKRRYLRDPXX 185
D ++ LF VS++K AY + Q A PYD +L L KR YL+
Sbjct: 73 DGEISKLFDIVSSLKLAYLEFQQAHLPYDPDKIIEADNLVVSQLEALRRIKRLYLK---- 128
Query: 186 XXXXXXXXXXXXXXXXXEEQRHLLKTYQITARKLEGELRAKEAEADRARSSXXXXXXXXX 245
+ R+ ++ + KL+ ++RAKE+E
Sbjct: 129 -TIQLNAKKTEIAASCLDRLRYEIEVNEKHLEKLKAQVRAKESEIHSLIKKQECL----- 182
Query: 246 XXXXXXHPGRTLASLDELHLSGLNPTHFLTALRHTVKSIRSFSKSMLNSMQSAGWDLXXX 305
+A +L ++ + F A R KS+ F+K ++ M++ W+L
Sbjct: 183 -----------VAENRKLENRIVSVSSFEFAFRAASKSVHDFAKPLITLMKATDWNLEKA 231
Query: 306 XXXVHPGVQLRRAGDTKFVFESYVAMKMFANFHRRDFNLSFLXXXXXXXXXXXXXXXTEL 365
+ V + D K+ FESY+ +MF +++ L L
Sbjct: 232 VESIVGNVTFAKTSDKKYAFESYIVRRMFHGIKLNPCDVTEL-----------MSFDDPL 280
Query: 366 KAAPASAFLDARNARWGGFGKFLRAKYLSLVHARMETAFFGRLEQRGIVSAG 417
A +AF D+ F +F KYL +VH ME +FFG L+ RG+V G
Sbjct: 281 DA--LTAFSDS------AFSRFCGQKYLLVVHPSMEASFFGNLDMRGLVLLG 324
>AT2G32130.1 | chr2:13654996-13655469 REVERSE LENGTH=158
Length = 157
Score = 59.7 bits (143), Expect = 4e-09, Method: Composition-based stats.
Identities = 33/108 (30%), Positives = 54/108 (50%), Gaps = 5/108 (4%)
Query: 127 SLLANLFAGVSAVKAAYAQLQLAQFPYDXXXXXXXXXXXXXELTRLSDTKRRYLRDPXXX 186
+++A +FA +++KAAYA+LQ AQ PYD EL LS+ KR ++R
Sbjct: 35 AVVAKIFASTTSIKAAYAELQRAQSPYDSDAIQAADTVVVNELKTLSELKRSFMR----- 89
Query: 187 XXXXXXXXXXXXXXXXEEQRHLLKTYQITARKLEGELRAKEAEADRAR 234
EQ+ L++TY+I ++LE E+ K+ + D +
Sbjct: 90 KELNLSPKVAIMLAEIHEQQSLMRTYEIAMKRLEFEVTEKKVKIDELK 137
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.322 0.135 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,413,444
Number of extensions: 229241
Number of successful extensions: 375
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 341
Number of HSP's successfully gapped: 11
Length of query: 520
Length of database: 11,106,569
Length adjustment: 103
Effective length of query: 417
Effective length of database: 8,282,721
Effective search space: 3453894657
Effective search space used: 3453894657
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 114 (48.5 bits)