BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0194300 Os01g0194300|AK120715
(582 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G64280.1 | chr1:23853329-23855407 REVERSE LENGTH=594 444 e-125
AT4G26120.1 | chr4:13236448-13238487 FORWARD LENGTH=601 431 e-121
AT5G45110.1 | chr5:18229319-18231334 FORWARD LENGTH=587 356 2e-98
AT4G19660.1 | chr4:10696266-10698243 REVERSE LENGTH=575 355 4e-98
AT3G57130.1 | chr3:21147835-21150027 FORWARD LENGTH=468 136 3e-32
AT2G41370.1 | chr2:17238019-17240203 REVERSE LENGTH=492 136 3e-32
>AT1G64280.1 | chr1:23853329-23855407 REVERSE LENGTH=594
Length = 593
Score = 444 bits (1143), Expect = e-125, Method: Compositional matrix adjust.
Identities = 247/536 (46%), Positives = 345/536 (64%), Gaps = 28/536 (5%)
Query: 34 LRRLSDNLAAAFRSPEDFAFLADARIAVPXXXXXXXDLLVHRCVLSARSPFXXXXXXXXX 93
L+ LS++ + F SP+DF +DA++ + ++ HRCVLSARS F
Sbjct: 46 LQLLSNSFESVFDSPDDF--YSDAKLVL----SDGREVSFHRCVLSARSSFFKSALAAAK 99
Query: 94 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLVLDYLYSGRVGDLPKAACLCVDE 153
VL Y+YS RV PK C DE
Sbjct: 100 KEKDSNNTAAVKLELKEIAKDYEVGFDSVVT------VLAYVYSSRVRPPPKGVSECADE 153
Query: 154 DCAHVGCHPAVAFMAQVLFAASTFQVAELTNLFQRRLLDVLDKVEVDNLLLILSVANLCN 213
+C HV C PAV FM +VL+ A F++ EL L+QR LLDV+DKV +++ L+IL +AN+C
Sbjct: 154 NCCHVACRPAVDFMLEVLYLAFIFKIPELITLYQRHLLDVVDKVVIEDTLVILKLANICG 213
Query: 214 KSCMKLLERCLDMVVRSNLDMITLEKSLPPDVIKQIIDARLSLGLISPENKGFPNKHVRR 273
K+CMKLL+RC +++V+SN+DM++LEKSLP +++K+IID R LGL P+ K KHV
Sbjct: 214 KACMKLLDRCKEIIVKSNVDMVSLEKSLPEELVKEIIDRRKELGLEVPKVK----KHVSN 269
Query: 274 IHRALDSDDVELVRMLLTEGQTNLDDAFALHYAVEHCDSKITTELLDLALADVNHRNPRG 333
+H+ALDSDD+ELV++LL E TNLDDA ALH+AV +C+ K T+LL L LADVNHRNPRG
Sbjct: 270 VHKALDSDDIELVKLLLKEDHTNLDDACALHFAVAYCNVKTATDLLKLDLADVNHRNPRG 329
Query: 334 YTVLHIAARRREPKIIVSLLTKGARPADVTFDGRKAVQISKRLTKQGDYFGVTEEGKPSP 393
YTVLH+AA R+EP++I+SLL KGA ++ T +GR A+ I+K+ T + + E+ K S
Sbjct: 330 YTVLHVAAMRKEPQLILSLLEKGASASEATLEGRTALMIAKQATMAVECNNIPEQCKHSL 389
Query: 394 KDRLCIEILEQAERRDPQLGEASVSLAMAGESLRGRLLYLENRVALARIMFPMEARVAMD 453
K RLC+EILEQ ++R+ + S A+A + L+ LL LENRVALA+ +FP EA+ AM+
Sbjct: 390 KGRLCVEILEQEDKREQIPRDVPPSFAVAADELKMTLLDLENRVALAQRLFPTEAQAAME 449
Query: 454 IAQVDGTLEFNLGSGANPPPER----QRTTVDLNESPFIMKEEHLARMTALSKTVELGKR 509
IA++ GT EF + S P+R +RT+ + +PF + EEH +R+ ALSKTVELGKR
Sbjct: 450 IAEMKGTCEFIVTS---LEPDRLTGTKRTSPGVKIAPFRILEEHQSRLKALSKTVELGKR 506
Query: 510 FFPRCSNVLDKIMD-DETDPVSLGRDTSAEKR----KRFHDLQDVLQKAFHEDKEE 560
FFPRCS VLD+IM+ ++ ++ G D +AEKR +R+ ++Q+ L+KAF ED E
Sbjct: 507 FFPRCSAVLDQIMNCEDLTQLACGEDDTAEKRLQKKQRYMEIQETLKKAFSEDNLE 562
>AT4G26120.1 | chr4:13236448-13238487 FORWARD LENGTH=601
Length = 600
Score = 431 bits (1107), Expect = e-121, Method: Compositional matrix adjust.
Identities = 244/536 (45%), Positives = 332/536 (61%), Gaps = 32/536 (5%)
Query: 34 LRRLSDNLAAAFRSPEDFAFLADARIAVPXXXXXXXDLLVHRCVLSARSPFXXXXXXXXX 93
L+ LS+ L + F SPE F +DA++ + ++ HRC+LSAR P
Sbjct: 48 LKLLSNCLESVFDSPE--TFYSDAKLVL----AGGREVSFHRCILSARIPVFKSALATVK 101
Query: 94 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLVLDYLYSGRVGDLPKAACLCVDE 153
VL Y+YSGRV PK A CVD+
Sbjct: 102 EQKSSTTVKLQLKEIARDYEVGFDSVVA---------VLAYVYSGRVRSPPKGASACVDD 152
Query: 154 DCAHVGCHPAVAFMAQVLFAASTFQVAELTNLFQRRLLDVLDKVEVDNLLLILSVANLCN 213
DC HV C V FM +VL+ + FQ+ EL L++R+ L+++DKV V+++L+I + LC
Sbjct: 153 DCCHVACRSKVDFMVEVLYLSFVFQIQELVTLYERQFLEIVDKVVVEDILVIFKLDTLCG 212
Query: 214 KSCMKLLERCLDMVVRSNLDMITLEKSLPPDVIKQIIDARLSLGLISPENKGFPNKHVRR 273
+ KLL+RC++++V+S++++++LEKSLP + KQIID R +L L P+ + +HV+
Sbjct: 213 TTYKKLLDRCIEIIVKSDIELVSLEKSLPQHIFKQIIDIREALCLEPPKLE----RHVKN 268
Query: 274 IHRALDSDDVELVRMLLTEGQTNLDDAFALHYAVEHCDSKITTELLDLALADVNHRNPRG 333
I++ALDSDDVELV+MLL EG TNLD+A+ALH+A+ HC K +LL+L LADVN RNPRG
Sbjct: 269 IYKALDSDDVELVKMLLLEGHTNLDEAYALHFAIAHCAVKTAYDLLELELADVNLRNPRG 328
Query: 334 YTVLHIAARRREPKIIVSLLTKGARPADVTFDGRKAVQISKRLTKQGDYFGVTEEGKPSP 393
YTVLH+AA R+EPK+I+SLL KGA D T DGR A+ I KRLTK DY TE+G PS
Sbjct: 329 YTVLHVAAMRKEPKLIISLLMKGANILDTTLDGRTALVIVKRLTKADDYKTSTEDGTPSL 388
Query: 394 KDRLCIEILEQAERRDPQLG--EASVSLAMAGESLRGRLLYLENRVALARIMFPMEARVA 451
K LCIE+LE E++ L EAS+SL + E LR RLLY ENRVALAR++FP+E
Sbjct: 389 KGGLCIEVLEH-EQKLEYLSPIEASLSLPVTPEELRMRLLYYENRVALARLLFPVETETV 447
Query: 452 MDIAQVDGTLEFNLGSGANPPPE--RQRTTVDLNESPFIMKEEHLARMTALSKTVELGKR 509
IA+++ T EF S P +RT++DLN +PF + E+HL+R+ AL KTVELGKR
Sbjct: 448 QGIAKLEETCEFT-ASSLEPDHHIGEKRTSLDLNMAPFQIHEKHLSRLRALCKTVELGKR 506
Query: 510 FFPRCSNVLDKIMDDE--TDPVSLGRDTSA---EKRKRFHDLQDVLQKAFHEDKEE 560
+F RCS LD MD E S+ DT +K++R+ +LQ+ L K F EDKEE
Sbjct: 507 YFKRCS--LDHFMDTEDLNHLASVEEDTPEKRLQKKQRYMELQETLMKTFSEDKEE 560
>AT5G45110.1 | chr5:18229319-18231334 FORWARD LENGTH=587
Length = 586
Score = 356 bits (913), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 202/446 (45%), Positives = 279/446 (62%), Gaps = 27/446 (6%)
Query: 132 LDYLYSGRVGDLPKAACLCVDEDCAHVGCHPAVAFMAQVLFAASTFQVAELTNLFQRRLL 191
L Y+Y+GR+ P CVD C+H C PA+ F+ Q+++A+S QV EL + FQRRL
Sbjct: 123 LSYIYTGRLKPFPLEVSTCVDPVCSHDCCRPAIDFVVQLMYASSVLQVPELVSSFQRRLC 182
Query: 192 DVLDKVEVDNLLLILSVANLCNKSCMKLLERCLDMVVRSNLDMITLEKSLPPDVIKQIID 251
+ ++K V+N+L IL VA C + +LL++C++ V RS+L +EK +PP+V ++I
Sbjct: 183 NFVEKTLVENVLPILMVAFNCKLT--QLLDQCIERVARSDLYRFCIEKEVPPEVAEKIKQ 240
Query: 252 ARLSLGLISPENKGFPNK-------HVRRIHRALDSDDVELVRMLLTEGQTNLDDAFALH 304
RL ISP+++ K + +I +ALDSDDVELV++LLTE LD A LH
Sbjct: 241 LRL----ISPQDEETSPKISEKLLERIGKILKALDSDDVELVKLLLTESDITLDQANGLH 296
Query: 305 YAVEHCDSKITTELLDLALADVNHRNPRGYTVLHIAARRREPKIIVSLLTKGARPADVTF 364
Y+V + D K+ E+L L + DVN+RN RGYTVLH AA RREP II+SL+ KGA ++ T
Sbjct: 297 YSVVYSDPKVVAEILALDMGDVNYRNSRGYTVLHFAAMRREPSIIISLIDKGANASEFTS 356
Query: 365 DGRKAVQISKRLTKQGDYFGVTEEGKPSPKDRLCIEILEQAERRDPQLGEASVSLAMAGE 424
DGR AV I +RLT DY T +G+ S K RLCI+ILE+ R++P + + + E
Sbjct: 357 DGRSAVNILRRLTNPKDYHTKTAKGRESSKARLCIDILEREIRKNPMVLDTPMCSISMPE 416
Query: 425 SLRGRLLYLENRVALARIMFPMEARVAMDIAQVDGTLEFNLGSGANPPPE---RQRTTVD 481
L+ RLLYLE RV LA++ FP EA+VAMDI V+GT EF +G +PP + VD
Sbjct: 417 DLQMRLLYLEKRVGLAQLFFPTEAKVAMDIGNVEGTSEF---TGLSPPSSGLTGNLSQVD 473
Query: 482 LNESPFIMKEEHLARMTALSKTVELGKRFFPRCSNVLDKIM-----DDETDPVSLGRDTS 536
LNE+P + + L RM AL KTVE G+RFFP S VLDK M DD D + ++
Sbjct: 474 LNETPHMQTQRLLTRMVALMKTVETGRRFFPYGSEVLDKYMAEYIDDDILDDFHFEKGST 533
Query: 537 AE---KRKRFHDLQDVLQKAFHEDKE 559
E KR R+ +L+D +QKA+ +DKE
Sbjct: 534 HERRLKRMRYRELKDDVQKAYSKDKE 559
>AT4G19660.1 | chr4:10696266-10698243 REVERSE LENGTH=575
Length = 574
Score = 355 bits (911), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 200/442 (45%), Positives = 279/442 (63%), Gaps = 23/442 (5%)
Query: 132 LDYLYSGRVGDLPKAACLCVDEDCAHVGCHPAVAFMAQVLFAASTFQVAELTNLFQRRLL 191
L Y+Y+GR+ P CVD CAH C PA+ F ++++A+ FQ+ +L + FQR+L
Sbjct: 118 LSYIYTGRLKPFPIEVSTCVDSVCAHDSCKPAIDFAVELMYASFVFQIPDLVSSFQRKLR 177
Query: 192 DVLDKVEVDNLLLILSVANLCNKSCMKLLERCLDMVVRSNLDMITLEKSLPPDVIKQIID 251
+ ++K V+N+L IL VA C+ + +LL++C++ V RS+LD +EK LP +V+++I
Sbjct: 178 NYVEKSLVENVLPILLVAFHCDLT--QLLDQCIERVARSDLDRFCIEKELPLEVLEKIKQ 235
Query: 252 ARL-SLGLISPENKGFPNKHVRRIHRALDSDDVELVRMLLTEGQTNLDDAFALHYAVEHC 310
R+ S+ + E+K + ++ +ALDSDDVELV++LLTE LD A LHYAV +
Sbjct: 236 LRVKSVNIPEVEDKSI--ERTGKVLKALDSDDVELVKLLLTESDITLDQANGLHYAVAYS 293
Query: 311 DSKITTELLDLALADVNHRNPRGYTVLHIAARRREPKIIVSLLTKGARPADVTFDGRKAV 370
D K+ T++LDL +ADVN RN RGYTVLHIAA RREP II+ L+ KGA +D TFDGR AV
Sbjct: 294 DPKVVTQVLDLDMADVNFRNSRGYTVLHIAAMRREPTIIIPLIQKGANASDFTFDGRSAV 353
Query: 371 QISKRLTKQGDYFGVTEEGKPSPKDRLCIEILEQAERRDPQL-GEASVSLAMAGESLRGR 429
I +RLT+ DY T +PS K RLCI+ILE+ RR+P + G+ E L+ R
Sbjct: 354 NICRRLTRPKDYHTKTSRKEPS-KYRLCIDILEREIRRNPLVSGDTPTCSHSMPEDLQMR 412
Query: 430 LLYLENRVALARIMFPMEARVAMDIAQVDGTLEFNLGSGANPPPERQRTT-----VDLNE 484
LLYLE RV LA++ FP EA VAMD+A V+GT E +G PP TT VDLNE
Sbjct: 413 LLYLEKRVGLAQLFFPAEANVAMDVANVEGTSE---CTGLLTPPPSNDTTENLGKVDLNE 469
Query: 485 SPFIMKEEHLARMTALSKTVELGKRFFPRCSNVLDKIMDDETD--------PVSLGRDTS 536
+P++ + L RM AL KTVE G+R+FP C VLDK MD D P
Sbjct: 470 TPYVQTKRMLTRMKALMKTVETGRRYFPSCYEVLDKYMDQYMDEEIPDMSYPEKGTVKER 529
Query: 537 AEKRKRFHDLQDVLQKAFHEDK 558
+KR R+++L++ ++KA+ +DK
Sbjct: 530 RQKRMRYNELKNDVKKAYSKDK 551
>AT3G57130.1 | chr3:21147835-21150027 FORWARD LENGTH=468
Length = 467
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 98/296 (33%), Positives = 152/296 (51%), Gaps = 26/296 (8%)
Query: 130 LVLDYLYSGRVGDLPKAA---CLCVDEDCAHVGCHPAVAFMAQVLFAASTFQVAELTNLF 186
L+L +LYSG+V +P C D C H C AV +L AA F V +L L
Sbjct: 97 LLLQFLYSGQVSIVPHKHEPRSNCGDRGCWHTHCTAAVDLSLDILAAARYFGVEQLALLT 156
Query: 187 QRRLLDVLDKVEVDNLLLILSVANLCNKSCMKLLERCLDMVVRSNLDMITLEKSLPPDVI 246
Q+ L +++K +++++ +L + + +L C ++ +S L L K LP +++
Sbjct: 157 QKHLTSMVEKASIEDVMKVLIASR--KQDMHQLWTTCSYLIAKSGLPQEILAKHLPIELV 214
Query: 247 KQIIDARLSLGLISPENKGFPNKH------------VRRIHRALDSDDVELVRMLLTEGQ 294
+I + RL + P P+ H +RR+ RALDS DVELV++++
Sbjct: 215 AKIEELRLKSSM--PLRSLMPHHHDLTSTLDLEDQKIRRMRRALDSSDVELVKLMVMGEG 272
Query: 295 TNLDDAFALHYAVEHCDSKITTELLDLALADVNH-RNPRGYTVLHIAARRREPKIIVSLL 353
NLD++ AL YAVE+C ++ LL+L ADVN+ P G T LHIAA P ++ LL
Sbjct: 273 LNLDESLALIYAVENCSREVVKALLELGAADVNYPAGPTGKTALHIAAEMVSPDMVAVLL 332
Query: 354 TKGARPADVTFDGRKAVQISKRLTK----QGDYFGVTEEGKPSPKDRLCIEILEQA 405
A P T DG + I + LT +G G+T +P+ K RLC+E+++ A
Sbjct: 333 DHHADPNVQTVDGITPLDILRTLTSDFLFKGAIPGLTHI-EPN-KLRLCLELVQSA 386
>AT2G41370.1 | chr2:17238019-17240203 REVERSE LENGTH=492
Length = 491
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 98/296 (33%), Positives = 154/296 (52%), Gaps = 24/296 (8%)
Query: 130 LVLDYLYSGRVGDLPKAA---CLCVDEDCAHVGCHPAVAFMAQVLFAASTFQVAELTNLF 186
L+L +LYSG+V +P+ C + C H C AV L A+ F V +L L
Sbjct: 102 LLLQFLYSGQVSIVPQKHEPRPNCGERGCWHTHCSAAVDLALDTLAASRYFGVEQLALLT 161
Query: 187 QRRLLDVLDKVEVDNLLLILSVANLCNKSCMKLLERCLDMVVRSNLDMITLEKSLPPDVI 246
Q++L +++K +++++ +L + + +L C +V +S L L K LP DV+
Sbjct: 162 QKQLASMVEKASIEDVMKVLIASR--KQDMHQLWTTCSHLVAKSGLPPEILAKHLPIDVV 219
Query: 247 KQIIDARLSLGL----ISPEN--------KGFPNKHVRRIHRALDSDDVELVRMLLTEGQ 294
+I + RL + + P N + ++ +RR+ RALDS DVELV++++
Sbjct: 220 TKIEELRLKSSIARRSLMPHNHHHDLSVAQDLEDQKIRRMRRALDSSDVELVKLMVMGEG 279
Query: 295 TNLDDAFALHYAVEHCDSKITTELLDLALADVNH-RNPRGYTVLHIAARRREPKIIVSLL 353
NLD++ ALHYAVE C ++ LL+L ADVN+ P G T LHIAA P ++ LL
Sbjct: 280 LNLDESLALHYAVESCSREVVKALLELGAADVNYPAGPAGKTPLHIAAEMVSPDMVAVLL 339
Query: 354 TKGARPADVTFDGRKAVQISKRLTK----QGDYFGVTEEGKPSPKDRLCIEILEQA 405
A P T G + I + LT +G G+T +P+ K RLC+E+++ A
Sbjct: 340 DHHADPNVRTVGGITPLDILRTLTSDFLFKGAVPGLTHI-EPN-KLRLCLELVQSA 393
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.321 0.136 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 10,509,739
Number of extensions: 403427
Number of successful extensions: 1212
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 1193
Number of HSP's successfully gapped: 6
Length of query: 582
Length of database: 11,106,569
Length adjustment: 104
Effective length of query: 478
Effective length of database: 8,255,305
Effective search space: 3946035790
Effective search space used: 3946035790
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 114 (48.5 bits)