BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0192000 Os01g0192000|AK100770
(386 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G19810.1 | chr2:8550419-8551498 FORWARD LENGTH=360 248 5e-66
AT4G29190.1 | chr4:14392233-14393303 REVERSE LENGTH=357 246 2e-65
AT2G25900.1 | chr2:11041817-11042764 FORWARD LENGTH=316 224 6e-59
AT2G41900.1 | chr2:17491352-17493502 FORWARD LENGTH=717 200 1e-51
AT1G03790.1 | chr1:954589-955770 FORWARD LENGTH=394 199 3e-51
AT5G12850.1 | chr5:4057068-4059188 FORWARD LENGTH=707 189 3e-48
AT5G58620.1 | chr5:23693959-23695782 FORWARD LENGTH=608 188 4e-48
AT5G44260.1 | chr5:17829974-17831119 REVERSE LENGTH=382 188 5e-48
AT2G40140.1 | chr2:16772537-16774330 FORWARD LENGTH=598 178 5e-45
AT3G55980.1 | chr3:20776857-20778599 FORWARD LENGTH=581 174 5e-44
AT5G07500.1 | chr5:2372716-2373453 FORWARD LENGTH=246 166 1e-41
>AT2G19810.1 | chr2:8550419-8551498 FORWARD LENGTH=360
Length = 359
Score = 248 bits (632), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 168/397 (42%), Positives = 205/397 (51%), Gaps = 52/397 (13%)
Query: 2 MMMGEGVSSVPPWSHLP-------VSGVDVLXXXXXXXDEMTPYVIAALRDYLPANDVGV 54
MM+GE P H+P ++ D+ M +A L+ YLP+N+
Sbjct: 1 MMIGESHRGFNPTVHIPPWPLSEDLTVSDIYGSPDGGSSMME--ALAELQRYLPSNEPD- 57
Query: 55 GXXXXXXXXXXXXXXXXXXXXXFRMYEFKVRRCARGRSHDWTECPFAHPGEKARRRDPRK 114
FRMYEFKVRRCARGRSHDWTECP+AHPGEKARRRDPRK
Sbjct: 58 -PDSDPDLSGPDSPIDAYTCDHFRMYEFKVRRCARGRSHDWTECPYAHPGEKARRRDPRK 116
Query: 115 YHYSGTACPDFRKGGCKRGDACEYAHGVFECWLHPARYRTQPCKDGTACRRRVCFFAHTP 174
+HYSGTACP+FRKG CKRGDACE++HGVFECWLHPARYRTQPCKDG CRRRVCFFAH+P
Sbjct: 117 FHYSGTACPEFRKGCCKRGDACEFSHGVFECWLHPARYRTQPCKDGGNCRRRVCFFAHSP 176
Query: 175 DQLRVLPAQQSSPRSVASSPLAESYDGSPLRRQAFESYLTKTIXXXXXXXXXXXXXXXXX 234
DQ+RVLP Q SP V S + SP R+AF+ ++ +
Sbjct: 177 DQIRVLPNQ--SPDRVDSFDVL-----SPTIRRAFQFSISPSSNSPPVSPRGDSDSSCSL 229
Query: 235 XXXXXXXXDGAAAIRRGSWPGVGSPVNDVLASFRQLRLNKVKXXXXXXXXXXX--XXAVY 292
G NDV+AS R L+LNKVK + +
Sbjct: 230 LSRSLGSNLG----------------NDVVASLRNLQLNKVKSSLSSSYNNQIGGYGSGF 273
Query: 293 GSPKAATGLYXXXXXXXXXXXXXXXXXXFMPNLEPLDLGLIGDEEP-VQRVESGRALREK 351
GSP+ + FM E GL +EEP ++RVESGR LR +
Sbjct: 274 GSPRGSV-----LGPGFRSLPTTPTRPGFMNIWE---NGL--EEEPAMERVESGRELRAQ 323
Query: 352 VFERLSRD---GAISGDATAFATAGVGLDVDWVSDLI 385
+FE+LS++ G I D AG DV WVSDL+
Sbjct: 324 LFEKLSKENCMGRIEPDPD--QGAGDTPDVGWVSDLV 358
>AT4G29190.1 | chr4:14392233-14393303 REVERSE LENGTH=357
Length = 356
Score = 246 bits (627), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 162/397 (40%), Positives = 202/397 (50%), Gaps = 55/397 (13%)
Query: 2 MMMGEG-----VSSVPPWSHLP-VSGVDVLXXXXXXXDEMTPYVIAALRDYLPANDVGVG 55
MM+GE +PPW L ++ + D +A L+ YLP+N+
Sbjct: 1 MMIGETRRTYPTVEIPPWPVLEELTTSEFFSPVMNSPDCSMLEALAGLQRYLPSNEPD-- 58
Query: 56 XXXXXXXXXXXXXXXXXXXXXFRMYEFKVRRCARGRSHDWTECPFAHPGEKARRRDPRKY 115
FRMY+FKVRRCARGRSHDWTECP+AHPGEKARRRDPRKY
Sbjct: 59 PESYPDLLGPDSPIDAYSCDHFRMYDFKVRRCARGRSHDWTECPYAHPGEKARRRDPRKY 118
Query: 116 HYSGTACPDFRKGGCKRGDACEYAHGVFECWLHPARYRTQPCKDGTACRRRVCFFAHTPD 175
HYSGTACPDFRKGGCK+GD+CE+AHGVFECWLHPARYRTQPCKDG C R++CFFAH+PD
Sbjct: 119 HYSGTACPDFRKGGCKKGDSCEFAHGVFECWLHPARYRTQPCKDGGNCLRKICFFAHSPD 178
Query: 176 QLRVLPAQQSSPRSVASSPLAESYD-GSPLRRQAFESYLTKTIXXXXXXXXXXXXXXXXX 234
QLR L SP V +S+D SP+R +AF+ L+ +
Sbjct: 179 QLRFL--HTRSPDRV------DSFDVSSPIRARAFQ--LSISPVSGSPPMSPRADSESSP 228
Query: 235 XXXXXXXXDGAAAIRRGSWPGVGSPVNDVLASFRQLRLNKVKXXXXXXXXXXXXXAVYGS 294
G+ +I NDV+ SFR L+ N VK +GS
Sbjct: 229 MTQSLSRSLGSCSI------------NDVVPSFRNLQFNSVKSFPRNNPLFG-----FGS 271
Query: 295 PKAAT---GLYXXXXXXXXXXXXXXXXXXFMPNLEPLDLGLIGDEEPVQR--VESGRALR 349
P+ + G NL+ + GL +EEPV VESGR LR
Sbjct: 272 PRGSILGPGFQSLPTTPTRPG-----------NLDIWEYGL--EEEPVMERVVESGRELR 318
Query: 350 EKVFERLSRDGAISGDAT-AFATAGVGLDVDWVSDLI 385
EK+ E+L ++ + A G DV WVSDL+
Sbjct: 319 EKMREKLHKENCMDRVAQDPDQNLGEAPDVGWVSDLL 355
>AT2G25900.1 | chr2:11041817-11042764 FORWARD LENGTH=316
Length = 315
Score = 224 bits (571), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 109/197 (55%), Positives = 132/197 (67%), Gaps = 19/197 (9%)
Query: 2 MMMGEGVS------SVPPWSHL---------PVSGVDVLXXXXXXXDEMTPYV--IAALR 44
MM+GE + +P W + P S V+ L +PY+ A+L
Sbjct: 1 MMIGENKNRPHPTIHIPQWDQINDPTATISSPFSSVN-LNSVNDYPHSPSPYLDSFASLF 59
Query: 45 DYLPANDVGVGXXXXXXXXXXXXXXXXXXXXXFRMYEFKVRRCARGRSHDWTECPFAHPG 104
YLP+N++ FR+YEFK+RRCARGRSHDWTECPFAHPG
Sbjct: 60 RYLPSNEL-TNDSDSSSGDESSPLTDSFSSDEFRIYEFKIRRCARGRSHDWTECPFAHPG 118
Query: 105 EKARRRDPRKYHYSGTACPDFRKGGCKRGDACEYAHGVFECWLHPARYRTQPCKDGTACR 164
EKARRRDPRK+HYSGTACP+FRKG C+RGD+CE++HGVFECWLHP+RYRTQPCKDGT+CR
Sbjct: 119 EKARRRDPRKFHYSGTACPEFRKGSCRRGDSCEFSHGVFECWLHPSRYRTQPCKDGTSCR 178
Query: 165 RRVCFFAHTPDQLRVLP 181
RR+CFFAHT +QLRVLP
Sbjct: 179 RRICFFAHTTEQLRVLP 195
>AT2G41900.1 | chr2:17491352-17493502 FORWARD LENGTH=717
Length = 716
Score = 200 bits (508), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 88/119 (73%), Positives = 95/119 (79%), Gaps = 4/119 (3%)
Query: 77 FRMYEFKVRRCARGRSHDWTECPFAHPGEKARRRDPRKYHYSGTACPDFRKGGCKRGDAC 136
FRMY FKVR C+R SHDWTECPF HPGE ARRRDPRK+HYS CPDFRKG C+RGD C
Sbjct: 262 FRMYSFKVRPCSRAYSHDWTECPFVHPGENARRRDPRKFHYSCVPCPDFRKGACRRGDMC 321
Query: 137 EYAHGVFECWLHPARYRTQPCKDGTACRRRVCFFAHTPDQLRVLPAQQS----SPRSVA 191
EYAHGVFECWLHPA+YRT+ CKDGT C RRVCFFAHTP++LR L A SPRS A
Sbjct: 322 EYAHGVFECWLHPAQYRTRLCKDGTGCARRVCFFAHTPEELRPLYASTGSAVPSPRSNA 380
>AT1G03790.1 | chr1:954589-955770 FORWARD LENGTH=394
Length = 393
Score = 199 bits (505), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 86/123 (69%), Positives = 102/123 (82%), Gaps = 1/123 (0%)
Query: 77 FRMYEFKVRRCARGRSHDWTECPFAHPGEKARRRDPRKYHYSGTACPDFRKGG-CKRGDA 135
FRM+EFK+RRC R RSHDWT+CPFAHPGEKARRRDPR++ YSG CP+FR+GG C RGD
Sbjct: 83 FRMFEFKIRRCTRSRSHDWTDCPFAHPGEKARRRDPRRFQYSGEVCPEFRRGGDCSRGDD 142
Query: 136 CEYAHGVFECWLHPARYRTQPCKDGTACRRRVCFFAHTPDQLRVLPAQQSSPRSVASSPL 195
CE+AHGVFECWLHP RYRT+ CKDG C+R+VCFFAH+P QLRVLP + S S + SP
Sbjct: 143 CEFAHGVFECWLHPIRYRTEACKDGKHCKRKVCFFAHSPRQLRVLPPENVSGVSASPSPA 202
Query: 196 AES 198
A++
Sbjct: 203 AKN 205
>AT5G12850.1 | chr5:4057068-4059188 FORWARD LENGTH=707
Length = 706
Score = 189 bits (479), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 76/104 (73%), Positives = 87/104 (83%)
Query: 77 FRMYEFKVRRCARGRSHDWTECPFAHPGEKARRRDPRKYHYSGTACPDFRKGGCKRGDAC 136
FRM+ FK+R C+R SHDWTECPFAHPGE ARRRDPRK+HY+ CPDF+KG CK+GD C
Sbjct: 258 FRMFSFKIRPCSRAYSHDWTECPFAHPGENARRRDPRKFHYTCVPCPDFKKGSCKQGDMC 317
Query: 137 EYAHGVFECWLHPARYRTQPCKDGTACRRRVCFFAHTPDQLRVL 180
EYAHGVFECWLHPA+YRT+ CKDG C RRVCFFAH ++LR L
Sbjct: 318 EYAHGVFECWLHPAQYRTRLCKDGMGCNRRVCFFAHANEELRPL 361
>AT5G58620.1 | chr5:23693959-23695782 FORWARD LENGTH=608
Length = 607
Score = 188 bits (477), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 77/104 (74%), Positives = 86/104 (82%)
Query: 77 FRMYEFKVRRCARGRSHDWTECPFAHPGEKARRRDPRKYHYSGTACPDFRKGGCKRGDAC 136
FRMY FK++ C+R SHDWTECPF HPGE ARRRDPRKYHYS CP+FRKG C RGD C
Sbjct: 210 FRMYAFKIKPCSRAYSHDWTECPFVHPGENARRRDPRKYHYSCVPCPEFRKGSCSRGDTC 269
Query: 137 EYAHGVFECWLHPARYRTQPCKDGTACRRRVCFFAHTPDQLRVL 180
EYAHG+FECWLHPA+YRT+ CKD T C RRVCFFAH P++LR L
Sbjct: 270 EYAHGIFECWLHPAQYRTRLCKDETNCSRRVCFFAHKPEELRPL 313
>AT5G44260.1 | chr5:17829974-17831119 REVERSE LENGTH=382
Length = 381
Score = 188 bits (477), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 79/106 (74%), Positives = 92/106 (86%), Gaps = 1/106 (0%)
Query: 77 FRMYEFKVRRCARGRSHDWTECPFAHPGEKARRRDPRKYHYSGTACPDF-RKGGCKRGDA 135
FRMYEFK+RRC R RSHDWT+CPF+HPGEKARRRDPR++HY+G CP+F R G C RGD
Sbjct: 61 FRMYEFKIRRCTRSRSHDWTDCPFSHPGEKARRRDPRRFHYTGEVCPEFSRHGDCSRGDE 120
Query: 136 CEYAHGVFECWLHPARYRTQPCKDGTACRRRVCFFAHTPDQLRVLP 181
C +AHGVFECWLHP+RYRT+ CKDG C+R+VCFFAH+P QLRVLP
Sbjct: 121 CGFAHGVFECWLHPSRYRTEACKDGKHCKRKVCFFAHSPRQLRVLP 166
>AT2G40140.1 | chr2:16772537-16774330 FORWARD LENGTH=598
Length = 597
Score = 178 bits (451), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 80/122 (65%), Positives = 91/122 (74%), Gaps = 4/122 (3%)
Query: 77 FRMYEFKVRRCARGRSHDWTECPFAHPGEKARRRDPRKYHYSGTACPDFRKGGCKRGDAC 136
FRM+ FKV+ C+R SHDWTECPF HPGE ARRRDPRKY Y+ CP+FRKG C +GD+C
Sbjct: 215 FRMFSFKVKPCSRAYSHDWTECPFVHPGENARRRDPRKYPYTCVPCPEFRKGSCPKGDSC 274
Query: 137 EYAHGVFECWLHPARYRTQPCKDGTACRRRVCFFAHTPDQLRVLPAQQS----SPRSVAS 192
EYAHGVFE WLHPA+YRT+ CKD T C RRVCFFAH D+LR + A SPRS
Sbjct: 275 EYAHGVFESWLHPAQYRTRLCKDETGCARRVCFFAHRRDELRPVNASTGSAMVSPRSSNQ 334
Query: 193 SP 194
SP
Sbjct: 335 SP 336
>AT3G55980.1 | chr3:20776857-20778599 FORWARD LENGTH=581
Length = 580
Score = 174 bits (442), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 75/120 (62%), Positives = 91/120 (75%), Gaps = 2/120 (1%)
Query: 77 FRMYEFKVRRCARGRSHDWTECPFAHPGEKARRRDPRKYHYSGTACPDFRKGGCKRGDAC 136
FRMY FKV+ C+R SHDWTEC F HPGE ARRRDPRKY Y+ CP+FRKG C +GD+C
Sbjct: 212 FRMYSFKVKPCSRAYSHDWTECAFVHPGENARRRDPRKYPYTCVPCPEFRKGSCPKGDSC 271
Query: 137 EYAHGVFECWLHPARYRTQPCKDGTACRRRVCFFAHTPDQLRVLPAQQSSPRSVASSPLA 196
EYAHGVFE WLHPA+Y+T+ CKD T C R+VCFFAH +++R P S+ +VA SP +
Sbjct: 272 EYAHGVFESWLHPAQYKTRLCKDETGCARKVCFFAHKREEMR--PVNASTGSAVAQSPFS 329
>AT5G07500.1 | chr5:2372716-2373453 FORWARD LENGTH=246
Length = 245
Score = 166 bits (421), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 71/102 (69%), Positives = 82/102 (80%)
Query: 77 FRMYEFKVRRCARGRSHDWTECPFAHPGEKARRRDPRKYHYSGTACPDFRKGGCKRGDAC 136
FRMY +K++RC R RSHDWTECP+AH GEKA RRDPR+Y Y ACP FR G C RGD+C
Sbjct: 53 FRMYAYKIKRCPRTRSHDWTECPYAHRGEKATRRDPRRYTYCAVACPAFRNGACHRGDSC 112
Query: 137 EYAHGVFECWLHPARYRTQPCKDGTACRRRVCFFAHTPDQLR 178
E+AHGVFE WLHPARYRT+ C G C+R+VCFFAH P+QLR
Sbjct: 113 EFAHGVFEYWLHPARYRTRACNAGNLCQRKVCFFAHAPEQLR 154
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.321 0.137 0.437
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,866,032
Number of extensions: 241451
Number of successful extensions: 497
Number of sequences better than 1.0e-05: 11
Number of HSP's gapped: 494
Number of HSP's successfully gapped: 11
Length of query: 386
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 286
Effective length of database: 8,364,969
Effective search space: 2392381134
Effective search space used: 2392381134
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 113 (48.1 bits)