BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0189100 Os01g0189100|AK071981
(531 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G04710.1 | chr3:1278229-1280942 FORWARD LENGTH=457 198 6e-51
AT2G03430.1 | chr2:1036192-1037536 REVERSE LENGTH=241 69 7e-12
AT5G20350.1 | chr5:6876772-6881102 FORWARD LENGTH=621 63 4e-10
AT3G02850.1 | chr3:619701-623473 REVERSE LENGTH=829 57 3e-08
AT2G14255.1 | chr2:6036974-6040892 FORWARD LENGTH=537 54 1e-07
AT2G25600.1 | chr2:10894603-10898369 FORWARD LENGTH=889 49 5e-06
AT5G07270.1 | chr5:2280821-2283384 FORWARD LENGTH=514 49 8e-06
>AT3G04710.1 | chr3:1278229-1280942 FORWARD LENGTH=457
Length = 456
Score = 198 bits (503), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 147/426 (34%), Positives = 205/426 (48%), Gaps = 59/426 (13%)
Query: 20 LMKAAFCGNLGSLKGAMPIKRLEIEKVKAQDAVLAFKN-DGIGLLHAAACQGQLNVCKFL 78
++ AA GNL LK K+L+ E V + K+ + G LH AA +GQ +C++L
Sbjct: 18 ILNAACTGNLEFLKNVA--KQLD-EGKDLTKTVESIKDANKRGALHFAAREGQTEICRYL 74
Query: 79 VEELGGDVNIAGAQGLTPFMAAAESDDVPTVKYFLDHGGDVTKADVRGCTVLHHAAGTGC 138
+EEL + + G TP + AA + TVKY L+ G D A G T LHHAAGTG
Sbjct: 75 LEELKLNADAKDETGDTPLVHAARQGQIETVKYLLEQGADPNIASELGATALHHAAGTGE 134
Query: 139 CKVTEFLLSKGIPVDIDCGLGTPLLHAANXXXXXXXXXXXXXXADPNVIVNNGACSLLMS 198
++ + LLS+G+PVD + GTPL+ AA A+PN + LL S
Sbjct: 135 IELLKELLSRGVPVDSESESGTPLIWAAGHDQKNAVEVLLEHNANPNAETEDNITPLL-S 193
Query: 199 SLVCRSLKCMKLLIKAGADVNGKGALVSPLMFAASQGCYTNFIKFLLKAGANPNIPDDLG 258
++ SL C++LL+KAGA N +PL AA G I LLKAGA+PN D+ G
Sbjct: 194 AVAAGSLSCLELLVKAGAKANVFAGGATPLHIAADIGNL-ELINCLLKAGADPNQKDEEG 252
Query: 259 WLPVEHAALRDCREDVERLFPLTSPIPNVPEWSVNGIISH-------------AKVKD-- 303
P+E AA RD R+ VE LFPLT+ V +W+V+GI++H AK ++
Sbjct: 253 NRPLEVAAARDNRKVVEILFPLTTKPETVSDWTVDGILAHMESNKEQEENSNKAKSQETG 312
Query: 304 -------IRP-----------------------MTID-------HGPTT-VLYTNRSICR 325
+ P M ID PT L++NRS+C
Sbjct: 313 IKKDLPVVSPEAKAKAAEAKARGQDAFHRKDFQMAIDAYTQAIDFDPTDHTLFSNRSLCW 372
Query: 326 LLMGDGEDAQSDGNRSRMMRPNWEKACYRWSAGHMLLKEYKQLWDALMDAQKLDPGSVEI 385
L +G E A SD R + P+W K C+R A LL+ + + +A + L P S E+
Sbjct: 373 LRLGQAEHALSDAKACRELNPDWPKGCFREGAALRLLQRFDEAANAFYEGVLLSPESKEL 432
Query: 386 EKEQRE 391
RE
Sbjct: 433 IDAFRE 438
>AT2G03430.1 | chr2:1036192-1037536 REVERSE LENGTH=241
Length = 240
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 80/171 (46%), Gaps = 5/171 (2%)
Query: 53 LAFKN-DGIGLLHAAACQGQLNVCKFLV--EELGGDVNIAGAQGLTPFMAAAESDDVPTV 109
L F+N DG LLH AA G + K L +E +N +G P +AA + V
Sbjct: 40 LNFRNEDGRSLLHVAASFGHSQIVKLLSSSDEAKTVINSKDDEGWAPLHSAASIGNAELV 99
Query: 110 KYFLDHGGDVTKADVRGCTVLHHAAGTGCCKVTEFLLSKGIPVDIDCGLG-TPLLHAANX 168
+ L G DV + G T LH+AA G ++ + LL+ G ++I +G TPL AA+
Sbjct: 100 EVLLTRGADVNAKNNGGRTALHYAASKGRLEIAQLLLTHGAKINITDKVGCTPLHRAASV 159
Query: 169 XXXXXXXXXXXXXADPNVIVNNGACSLLMSSLVCRSLKCMKLLIKAGADVN 219
A+ + G + LM S++C + LLI+ GADV+
Sbjct: 160 GKLEVCEFLIEEGAEIDATDKMGQTA-LMHSVICDDKQVAFLLIRHGADVD 209
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 47 KAQDAVLAFKNDGIGLLHAAACQGQLNVCKFLVEELGGDVNIAGAQGLTPFMAAAESDDV 106
+A+ + + ++G LH+AA G + + L+ G DVN G T AA +
Sbjct: 71 EAKTVINSKDDEGWAPLHSAASIGNAELVEVLLTR-GADVNAKNNGGRTALHYAASKGRL 129
Query: 107 PTVKYFLDHGGDVTKADVRGCTVLHHAAGTGCCKVTEFLLSKGIPVDIDCGLG-TPLLHA 165
+ L HG + D GCT LH AA G +V EFL+ +G +D +G T L+H+
Sbjct: 130 EIAQLLLTHGAKINITDKVGCTPLHRAASVGKLEVCEFLIEEGAEIDATDKMGQTALMHS 189
>AT5G20350.1 | chr5:6876772-6881102 FORWARD LENGTH=621
Length = 620
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 96/225 (42%), Gaps = 13/225 (5%)
Query: 54 AFKNDGIGLLHAAACQGQLNVCKFLVEELGGDVNIAGAQGLTPFMAAAESDDVPTVKYFL 113
+ KND ++ AA G L LVE G V+ A G +A ++ V +Y +
Sbjct: 30 SLKND----VYTAAAYGDLEKLHRLVECEGSSVSEPDALGYYALQWSALNNRVAVAQYLI 85
Query: 114 DHGGDVTKADVRGCTVLHHAAGTGCCKVTEFLLSKGIPVDIDCGLGTPLLHAANXXXXXX 173
+HGGDV D G T LH +A G +V E LL +G VD G H A
Sbjct: 86 EHGGDVNATDHTGQTALHWSAVRGAIQVAELLLQEGARVDATDMYGYQATHVAAQYGQTA 145
Query: 174 X--XXXXXXXADPNVIVNNGACSLLMSSL--VCRSLKCMKLLIKAGADVNGKGALVSPLM 229
ADP+V N+G L ++ S++ + L + +G +PL
Sbjct: 146 FLCHVVSKWNADPDVPDNDGRSPLHWAAYKGFADSIRLLLFLDAYRGRQDKEGC--TPLH 203
Query: 230 FAASQGCYTNFIKFLLKAGANPN--IPDDLGWLPVEHAALRDCRE 272
+AA +G L++AG + I D G P + AA ++ R+
Sbjct: 204 WAAIRG-NLEACTVLVQAGKKEDLMITDKTGLTPAQLAAEKNHRQ 247
>AT3G02850.1 | chr3:619701-623473 REVERSE LENGTH=829
Length = 828
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 100/228 (43%), Gaps = 7/228 (3%)
Query: 41 LEIEKVKAQDAVLAFKNDGIGLLHAAACQGQLNV-CKFLVEELGGDVNIAGAQGLTPFMA 99
L ++K + + F +DG +L+ + NV K L ++ ++ A+ +
Sbjct: 495 LRLDKQSFMNILEIFFHDGRRILNNLLEGKESNVRIKQLESDITFHISKQEAELALKLNS 554
Query: 100 AAESDDVPTVKYFLDHGGDVTKADVRGCTVLHHAAGTGCCKVTEFLLSKGIPVDIDCGLG 159
AA D+ +K + GGD K D G + LH AA G +T +L+ + + V+I LG
Sbjct: 555 AAFYGDLYQLKSLIRAGGDPNKTDYDGRSPLHLAASRGYEDITLYLIQESVDVNIKDKLG 614
Query: 160 -TPLLHAANXXXXXXXXXXXXXXADPNVIVNNGACSLLMSSLVCRSLKCMKLLIKAGADV 218
TPLL A A N+ A + L + + +K L+ G D
Sbjct: 615 STPLLEAIKNGNDRVAALLVKEGATLNI---ENAGTFLCTVVAKGDSDFLKRLLSNGIDP 671
Query: 219 NGKGA-LVSPLMFAASQGCYTNFIKFLLKAGANPNIPDDLGWLPVEHA 265
N K +PL AAS+G Y I+ L++A AN D G P++ A
Sbjct: 672 NSKDYDHRTPLHVAASEGFYVLAIQ-LVEASANVLAKDRWGNTPLDEA 718
>AT2G14255.1 | chr2:6036974-6040892 FORWARD LENGTH=537
Length = 536
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 87/214 (40%), Gaps = 41/214 (19%)
Query: 65 AAACQGQLNVCKFLVEELGGDVNIAGAQGLTPFMAAAESDDVPTVKYFLDHGGDVTKADV 124
+A+ G L+ K VE G V++ G AA ++ + +Y + HGGDV AD
Sbjct: 30 SASAYGDLHQLKHFVEHNGSSVSLPDDNGFYALQWAALNNSLHVAQYIIQHGGDVNSADN 89
Query: 125 RGCTVLHHAAGTGCCKVTEFLLSKGIPVDIDCGLGTPLLHAANXXXXXXXXXXXXXXADP 184
T LH AA G V + LL G ++
Sbjct: 90 IQQTPLHWAAVKGSIDVADLLLQHGARIE------------------------------- 118
Query: 185 NVIVNNGACSLLMSSLVCRSLKCMKLLIKAGADVNG---KGALVSPLMFAASQGCYTNFI 241
+ NG ++ ++S ++ +++ AD N +G SPL +AA G +T +
Sbjct: 119 -AVDVNGFRAVHVASQYGQTAFVNHIIVDYAADYNALDIEGR--SPLHWAAYNG-FTETV 174
Query: 242 KFLLKAGANPNIPDDLGWLPVEHAALRDCREDVE 275
+ LL A N D+ G P+ A + +E+VE
Sbjct: 175 RLLLFRDACQNRQDNTGCTPLHWAVI---KENVE 205
>AT2G25600.1 | chr2:10894603-10898369 FORWARD LENGTH=889
Length = 888
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 87/216 (40%), Gaps = 35/216 (16%)
Query: 98 MAAAESDDVPTVKYFLDHGGDVTKADVRGCTVLHHAAGTGCCKVTEFLLSKGIPVDI-DC 156
AAA DD+ + L G + D G T LH AA G LL G +I D
Sbjct: 550 FAAARGDDL-LLHQLLRRGSSPNEMDKDGRTALHIAASKGSHYCVVLLLEHGADPNIRDS 608
Query: 157 GLGTPLLHAANXXXXXXXXXXXXXXADPNVIVNNGACSLLMSSLVCRS--------LKCM 208
PL A ++ NGA L + S+ S L +
Sbjct: 609 EGNVPLWEAIIGRHREIA----------KLLAENGA-KLSLDSVSYFSGLAVEKNCLDAL 657
Query: 209 KLLIKAGADV---NGKGALVSPLMFAASQGCYTNFIKFLLKAGANPNIPDDLGWLPVEHA 265
K +IK G DV +G G + L A S+G + +KFLL GA+ + PD GW P
Sbjct: 658 KDIIKYGGDVTLPDGNGT--TALHRAVSEG-HLEIVKFLLDQGADLDWPDSYGWTP-RGL 713
Query: 266 ALRDCREDVERLF----PLT---SPIPNVPEWSVNG 294
A E+++ LF P+ PIP +P+ V G
Sbjct: 714 ADHQGNEEIKTLFHNHRPVEKKPKPIPGIPQSPVTG 749
>AT5G07270.1 | chr5:2280821-2283384 FORWARD LENGTH=514
Length = 513
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 101/245 (41%), Gaps = 31/245 (12%)
Query: 63 LHAAACQGQLNVCKFLVEELGGDVNIAGAQGLTPFMAAAESDDVPTVKYFLDHGGDVTKA 122
LH AA +G + L+E G DVN G T M A V+ L +VT+A
Sbjct: 49 LHFAAAKGHNEIVGLLLEN-GADVNSRNYCGQTALMQACRYGHWEVVQTLLLFRCNVTRA 107
Query: 123 D-VRGCTVLHHAAGTGCCKVTEFLLSKGIPVD-IDCGLGTPLLHAANXXXXXXXXXXXXX 180
D + G T LH AA G + +L+ +P D ++ T ++ A N
Sbjct: 108 DYLAGRTALHFAAVNGHARCIRLVLADFLPSDKLNSLPETGVVTAKNKSEQSALSKFVNK 167
Query: 181 XADPNVIVNNGACSLLMSSLVCRSLKCMKLLIKAGADVNGK-----------GALVSPLM 229
AD G +L M++L C++LL+ A+V+ GA +PL
Sbjct: 168 AAD------GGITALHMAALN-GLFDCVQLLLDLEANVSAVTFHYGTSMDMIGAGSTPLH 220
Query: 230 FAASQGCYTNFIKFLLKAGANPNIPDDLGWLPVEHAALRDCREDVERLFPLTSP-----I 284
+AA G + LL GA + GWLP++ A + R +E PL SP I
Sbjct: 221 YAACGG-NLKCCQILLARGARKMTLNCNGWLPIDIARMWS-RHWLE---PLLSPNSDVVI 275
Query: 285 PNVPE 289
P P
Sbjct: 276 PAFPH 280
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.136 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 11,615,122
Number of extensions: 498363
Number of successful extensions: 1355
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 1371
Number of HSP's successfully gapped: 10
Length of query: 531
Length of database: 11,106,569
Length adjustment: 103
Effective length of query: 428
Effective length of database: 8,282,721
Effective search space: 3545004588
Effective search space used: 3545004588
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 114 (48.5 bits)