BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0187900 Os01g0187900|AK071611
(366 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G47390.1 | chr5:19227001-19228546 FORWARD LENGTH=366 234 6e-62
AT3G16350.1 | chr3:5547828-5549397 FORWARD LENGTH=388 229 1e-60
AT1G70000.1 | chr1:26363674-26364635 REVERSE LENGTH=262 148 6e-36
AT5G56840.1 | chr5:22980789-22982152 FORWARD LENGTH=234 146 1e-35
AT5G61620.1 | chr5:24772383-24773507 FORWARD LENGTH=318 145 3e-35
AT2G38090.1 | chr2:15945278-15946775 FORWARD LENGTH=299 125 4e-29
AT5G58900.1 | chr5:23783275-23784667 REVERSE LENGTH=289 124 5e-29
AT1G49010.1 | chr1:18132714-18133778 FORWARD LENGTH=315 120 1e-27
AT1G74840.1 | chr1:28116201-28117317 REVERSE LENGTH=266 115 3e-26
AT5G04760.1 | chr5:1373752-1374529 REVERSE LENGTH=216 114 6e-26
AT5G08520.1 | chr5:2755470-2757741 REVERSE LENGTH=299 114 6e-26
AT3G11280.1 | chr3:3533477-3534393 REVERSE LENGTH=264 112 2e-25
AT5G01200.1 | chr5:77116-78294 FORWARD LENGTH=268 111 5e-25
AT1G19000.1 | chr1:6561335-6562684 REVERSE LENGTH=286 109 2e-24
AT5G05790.1 | chr5:1740724-1741671 REVERSE LENGTH=278 108 3e-24
AT3G10580.1 | chr3:3307083-3308230 REVERSE LENGTH=288 98 6e-21
AT4G09450.1 | chr4:5983277-5984500 FORWARD LENGTH=201 94 1e-19
AT5G23650.1 | chr5:7969812-7971019 FORWARD LENGTH=338 91 1e-18
AT3G10590.1 | chr3:3310424-3311311 REVERSE LENGTH=207 80 2e-15
AT3G09600.1 | chr3:2946459-2948270 FORWARD LENGTH=299 54 1e-07
AT5G02840.1 | chr5:648794-651212 FORWARD LENGTH=294 51 8e-07
>AT5G47390.1 | chr5:19227001-19228546 FORWARD LENGTH=366
Length = 365
Score = 234 bits (597), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 156/382 (40%), Positives = 205/382 (53%), Gaps = 33/382 (8%)
Query: 1 MTRRCSHCSNNGHNARTCPARXXXXXXXXVRLFGVRLTSPPEVAMKKSASMSCIXXXXXX 60
MTRRCSHC++NGHN+RTCP R V+LFGVRLT E +++KSASM +
Sbjct: 1 MTRRCSHCNHNGHNSRTCPNRG-------VKLFGVRLT---EGSIRKSASMGNLSHYTGS 50
Query: 61 XXXXXXXXXXXXXXXXXXXXXXXXXXXXDDPTHASCSTNGRGERKKGTPWTEEEHRMFLM 120
+ A S++ ERKKGTPWTEEEHRMFL+
Sbjct: 51 GSGGHGTGSNTPGSPGDVPDHVAGDGYASEDFVAGSSSSR--ERKKGTPWTEEEHRMFLL 108
Query: 121 GLQKLGKGDWRGISRNFVVSRTPTQVASHAQKYFIRQTNSSRRKRRSSLFDMVP----EM 176
GLQKLGKGDWRGISRN+V +RTPTQVASHAQKYFIRQ+N SRRKRRSSLFDMVP ++
Sbjct: 109 GLQKLGKGDWRGISRNYVTTRTPTQVASHAQKYFIRQSNVSRRKRRSSLFDMVPDEVGDI 168
Query: 177 PMDESPVVVEQLMLHSTQDEATSSNQ--LPIS-HLVKQKEPEFARHLSDLQLRKHEESEF 233
PMD + + + + A S +Q P S H E E + E +
Sbjct: 169 PMDLQEPEEDNIPVETEMQGADSIHQTLAPSSLHAPSILEIEECESMDSTNSTTGEPTAT 228
Query: 234 TEPSLAALDLE--------MNHAAPFKTKFVLTMPTFYPALIPVPLTLWPPN-VANVGES 284
+ ++ LE + F + PT++ P P +WP V +
Sbjct: 229 AAAASSSSRLEETTQLQSQLQPQPQLPGSFPILYPTYFSPYYPFPFPIWPAGYVPEPPKK 288
Query: 285 GTNHEILKPTPVNGKEVINKADEVVGMSKLTIGDGSSNSIEPSALSLQLTGPTNTRQSAF 344
HEIL+PT V+ K IN DE++GMSKL++ + + + +LSL+L G +++RQSAF
Sbjct: 289 EETHEILRPTAVHSKAPIN-VDELLGMSKLSLAESNKHGESDQSLSLKLGGGSSSRQSAF 347
Query: 345 HVNPPMAGPDLNKRNNSPIHAV 366
H NP D+ S IHA+
Sbjct: 348 HPNPSSDSSDI----KSVIHAL 365
>AT3G16350.1 | chr3:5547828-5549397 FORWARD LENGTH=388
Length = 387
Score = 229 bits (585), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 175/410 (42%), Positives = 210/410 (51%), Gaps = 67/410 (16%)
Query: 1 MTRRCSHCSNNGHNARTCPARXXXXXXX-----------------XVRLFGVRLTSPPEV 43
MTRRCSHCSNNGHN+RTCP R V+LFGVRLT
Sbjct: 1 MTRRCSHCSNNGHNSRTCPTRGGGTCGGSGGGGGGGGGGGSGSSSAVKLFGVRLTD--GS 58
Query: 44 AMKKSASMSCIXXXXXXX--------------XXXXXXXXXXXXXXXXXXXXXXXXXXXD 89
+KKSASM + D
Sbjct: 59 IIKKSASMGNLSALAVAAAAATHHRLSPSSPLATSNLNDSPLSDHARYSNLHHNEGYLSD 118
Query: 90 DPTHASCSTNGRGERKKGTPWTEEEHRMFLMGLQKLGKGDWRGISRNFVVSRTPTQVASH 149
DP H S S++ RGERK+G PWTEEEHR+FL+GLQKLGKGDWRGISRN+V SRTPTQVASH
Sbjct: 119 DPAHGSGSSHRRGERKRGVPWTEEEHRLFLVGLQKLGKGDWRGISRNYVTSRTPTQVASH 178
Query: 150 AQKYFIRQTNSSRRKRRSSLFDMV-PEMPMDESPVVVEQLMLHSTQDEATSSNQLPISHL 208
AQKYFIR T+SSRRKRRSSLFDMV EM D SP TQ+E T + P
Sbjct: 179 AQKYFIRHTSSSRRKRRSSLFDMVTDEMVTDSSP----------TQEEQTLNGSSP---- 224
Query: 209 VKQKEPEFARHLSDLQLRKHEESEFTEPSLAALDLEMNHAAPFKTKFV---LTMPTFYPA 265
KEPE +L L+L + +E E A E + A + V L F+P
Sbjct: 225 --SKEPEKKSYLPSLELSLNNTTEAEEVVATAPRQEKSQEAIEPSNGVSPMLVPGGFFPP 282
Query: 266 LIPVPLTLWPP-------NVANVGESGTNHEILKPTPVNGKEVINKADEVVGMSKLTIGD 318
PV T+W P + N S H++LKP P KE +N DE+VGMS+L+IG
Sbjct: 283 CFPVTYTIWLPASLHGTEHALNAETSSQQHQVLKPKPGFAKERVN-MDELVGMSQLSIGM 341
Query: 319 GSSNSIE--PSALSLQLTGPTNTRQSAFHVNPPMAGPDLNKRNNSPIHAV 366
+ + E PS LSL+L +R SAFH N + G DL+K NS I A+
Sbjct: 342 ATRHETETSPSPLSLRL---EPSRPSAFHSNGSVNGADLSK-GNSAIQAI 387
>AT1G70000.1 | chr1:26363674-26364635 REVERSE LENGTH=262
Length = 261
Score = 148 bits (373), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 89/184 (48%), Positives = 106/184 (57%), Gaps = 28/184 (15%)
Query: 1 MTRRCSHCSNNGHNARTCPA--------RXXXXXXXXVRLFGVRLTSPPEVAMKKSASMS 52
M+R CS C NNGHN+RTCP + LFGVR+T +KS SM+
Sbjct: 1 MSRSCSQCGNNGHNSRTCPTDITTTGDNNDKGGGEKAIMLFGVRVTEASSSCFRKSVSMN 60
Query: 53 CIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDPTHASCSTNGRG-ERKKGTPWT 111
+ DD HAS GR ERK+GTPWT
Sbjct: 61 NLSQFDQTPDPNPTDDGGYAS---------------DDVVHAS----GRNRERKRGTPWT 101
Query: 112 EEEHRMFLMGLQKLGKGDWRGISRNFVVSRTPTQVASHAQKYFIRQTNSSRRKRRSSLFD 171
EEEHR+FL GL K+GKGDWRGISRNFV +RTPTQVASHAQKYF+R+TN +RR+RRSSLFD
Sbjct: 102 EEEHRLFLTGLHKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRTNQNRRRRRSSLFD 161
Query: 172 MVPE 175
+ P+
Sbjct: 162 ITPD 165
>AT5G56840.1 | chr5:22980789-22982152 FORWARD LENGTH=234
Length = 233
Score = 146 bits (369), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 85/194 (43%), Positives = 105/194 (54%), Gaps = 42/194 (21%)
Query: 1 MTRRCSHCSNNGHNARTCPARXXXXXXXXVRLFGVRLTSPP------------EVAMKKS 48
M RRCSHC N GHN+RTC + VRLFGV L + A+KKS
Sbjct: 1 MGRRCSHCGNVGHNSRTCSS----YQTRVVRLFGVHLDTTSSSPPPPPPPSILAAAIKKS 56
Query: 49 ASMSCIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDPTHASCSTNGRGERKKGT 108
SM C+ D H + +RKKG
Sbjct: 57 FSMDCLPACSSSSSSFAGYLS-------------------DGLAHKT------PDRKKGV 91
Query: 109 PWTEEEHRMFLMGLQKLGKGDWRGISRNFVVSRTPTQVASHAQKYFIRQTNS-SRRKRRS 167
PWT EEHR FL+GL+KLGKGDWRGISRNFVV+++PTQVASHAQKYF+RQT + ++RR+
Sbjct: 92 PWTAEEHRTFLIGLEKLGKGDWRGISRNFVVTKSPTQVASHAQKYFLRQTTTLHHKRRRT 151
Query: 168 SLFDMVPEMPMDES 181
SLFDMV ++E+
Sbjct: 152 SLFDMVSAGNVEEN 165
>AT5G61620.1 | chr5:24772383-24773507 FORWARD LENGTH=318
Length = 317
Score = 145 bits (367), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 79/177 (44%), Positives = 99/177 (55%), Gaps = 17/177 (9%)
Query: 1 MTRRCSHCSNNGHNARTCPARXXXXXXXXVRLFGVRLTS----PPEV-AMKKSASMSCIX 55
+ + CSHC +NGHNARTC V+LFGV ++S PPEV A++KS S+ +
Sbjct: 8 VAKTCSHCGHNGHNARTC---LNGVNKASVKLFGVNISSDPIRPPEVTALRKSLSLGNLD 64
Query: 56 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDPTHASCSTNGRGERKKGTPWTEEEH 115
H E+KKG PWTEEEH
Sbjct: 65 ALLANDESNGSGDPIAAVDDTGYHSDGQIHSKKGKTAH---------EKKKGKPWTEEEH 115
Query: 116 RMFLMGLQKLGKGDWRGISRNFVVSRTPTQVASHAQKYFIRQTNSSRRKRRSSLFDM 172
R FL+GL KLGKGDWRGI+++FV +RTPTQVASHAQKYFIR + +RKRR+SLFD+
Sbjct: 116 RNFLIGLNKLGKGDWRGIAKSFVSTRTPTQVASHAQKYFIRLNVNDKRKRRASLFDI 172
>AT2G38090.1 | chr2:15945278-15946775 FORWARD LENGTH=299
Length = 298
Score = 125 bits (313), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 56/79 (70%), Positives = 64/79 (81%), Gaps = 4/79 (5%)
Query: 103 ERKKGTPWTEEEHRMFLMGLQKLGKGDWRGISRNFVVSRTPTQVASHAQKYFIRQTNSSR 162
ERKKG PWTEEEHR FLMGL+K GKGDWR I+RNFV +RTPTQVASHAQKYFIRQ N +
Sbjct: 136 ERKKGVPWTEEEHRQFLMGLKKYGKGDWRNIARNFVTTRTPTQVASHAQKYFIRQVNGGK 195
Query: 163 RKRRSSLFDM----VPEMP 177
KRRSS+ D+ +P+ P
Sbjct: 196 DKRRSSIHDITTVNIPDSP 214
>AT5G58900.1 | chr5:23783275-23784667 REVERSE LENGTH=289
Length = 288
Score = 124 bits (312), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 58/88 (65%), Positives = 68/88 (77%), Gaps = 6/88 (6%)
Query: 91 PTHASC---STNGRG---ERKKGTPWTEEEHRMFLMGLQKLGKGDWRGISRNFVVSRTPT 144
P H C S GR ERKKG PWTEEEH++FLMGL+K GKGDWR ISRNFV++RTPT
Sbjct: 118 PGHQVCNKRSQAGRSPELERKKGVPWTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPT 177
Query: 145 QVASHAQKYFIRQTNSSRRKRRSSLFDM 172
QVASHAQKYFIRQ + + KRR+S+ D+
Sbjct: 178 QVASHAQKYFIRQLSGGKDKRRASIHDI 205
>AT1G49010.1 | chr1:18132714-18133778 FORWARD LENGTH=315
Length = 314
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 52/70 (74%), Positives = 61/70 (87%)
Query: 103 ERKKGTPWTEEEHRMFLMGLQKLGKGDWRGISRNFVVSRTPTQVASHAQKYFIRQTNSSR 162
ER+KG PWTEEEHR+FL+GL K GKGDWR ISRNFV+SRTPTQVASHAQKYFIR + +R
Sbjct: 129 ERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYFIRLNSMNR 188
Query: 163 RKRRSSLFDM 172
+RRSS+ D+
Sbjct: 189 DRRRSSIHDI 198
>AT1G74840.1 | chr1:28116201-28117317 REVERSE LENGTH=266
Length = 265
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/122 (56%), Positives = 89/122 (72%), Gaps = 3/122 (2%)
Query: 97 STNGRGERKKGTPWTEEEHRMFLMGLQKLGKGDWRGISRNFVVSRTPTQVASHAQKYFIR 156
S+NG+ ERK+G PWTEEEH++FL+GLQ++GKGDW+GISRNFV +RT TQVASHAQKYF+R
Sbjct: 85 SSNGKIERKRGVPWTEEEHKLFLLGLQRVGKGDWKGISRNFVKTRTSTQVASHAQKYFLR 144
Query: 157 QTNSSRRKRRSSLFDMVPE--MPMDESPVVVEQLMLHSTQDEATSSNQLPISHLVKQKEP 214
++N +RR+RRSSLFDM + +PM+E V+ Q + N I H V Q P
Sbjct: 145 RSNLNRRRRRSSLFDMTTDTVIPMEEDHQVLIQENTSQSSSPVPEINNFSI-HPVMQVFP 203
Query: 215 EF 216
EF
Sbjct: 204 EF 205
>AT5G04760.1 | chr5:1373752-1374529 REVERSE LENGTH=216
Length = 215
Score = 114 bits (286), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 49/76 (64%), Positives = 64/76 (84%)
Query: 97 STNGRGERKKGTPWTEEEHRMFLMGLQKLGKGDWRGISRNFVVSRTPTQVASHAQKYFIR 156
S +G ERK+GTPWTE EH++FL+GL++ GKGDWR ISRN VV+RTPTQVASHAQKYF+R
Sbjct: 88 SKHGESERKRGTPWTENEHKLFLIGLKRYGKGDWRSISRNVVVTRTPTQVASHAQKYFLR 147
Query: 157 QTNSSRRKRRSSLFDM 172
Q + + ++RSS+ D+
Sbjct: 148 QNSVKKERKRSSIHDI 163
>AT5G08520.1 | chr5:2755470-2757741 REVERSE LENGTH=299
Length = 298
Score = 114 bits (286), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 49/70 (70%), Positives = 60/70 (85%)
Query: 103 ERKKGTPWTEEEHRMFLMGLQKLGKGDWRGISRNFVVSRTPTQVASHAQKYFIRQTNSSR 162
ER+KG WTE+EHR+FL+GL K GKGDWR ISRNFVV+RTPTQVASHAQKYFIR + ++
Sbjct: 113 ERRKGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNK 172
Query: 163 RKRRSSLFDM 172
+RRSS+ D+
Sbjct: 173 DRRRSSIHDI 182
>AT3G11280.1 | chr3:3533477-3534393 REVERSE LENGTH=264
Length = 263
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 50/70 (71%), Positives = 59/70 (84%)
Query: 103 ERKKGTPWTEEEHRMFLMGLQKLGKGDWRGISRNFVVSRTPTQVASHAQKYFIRQTNSSR 162
+RKKG PWTEEEHR FL+GL K GKGDWR ISRNFVVS+TPTQVASHAQKY+ RQ + ++
Sbjct: 122 DRKKGVPWTEEEHRRFLLGLLKYGKGDWRNISRNFVVSKTPTQVASHAQKYYQRQLSGAK 181
Query: 163 RKRRSSLFDM 172
KRR S+ D+
Sbjct: 182 DKRRPSIHDI 191
>AT5G01200.1 | chr5:77116-78294 FORWARD LENGTH=268
Length = 267
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 48/70 (68%), Positives = 58/70 (82%)
Query: 103 ERKKGTPWTEEEHRMFLMGLQKLGKGDWRGISRNFVVSRTPTQVASHAQKYFIRQTNSSR 162
ERKKG PWTE+EH FLMGL+K GKGDWR I+++FV +RTPTQVASHAQKYF+RQ +
Sbjct: 141 ERKKGVPWTEDEHLRFLMGLKKYGKGDWRNIAKSFVTTRTPTQVASHAQKYFLRQLTDGK 200
Query: 163 RKRRSSLFDM 172
KRRSS+ D+
Sbjct: 201 DKRRSSIHDI 210
>AT1G19000.1 | chr1:6561335-6562684 REVERSE LENGTH=286
Length = 285
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 77/98 (78%), Gaps = 7/98 (7%)
Query: 89 DDPTHASCSTNGRGERKKGTPWTEEEHRMFLMGLQKLGKGDWRGISRNFVVSRTPTQVAS 148
+D S S+ GR K+G PWTE EH+ FL+GLQK+GKGDW+GISRNFV SRTPTQVAS
Sbjct: 86 NDAVQISSSSGGR---KRGVPWTENEHKRFLIGLQKVGKGDWKGISRNFVKSRTPTQVAS 142
Query: 149 HAQKYFIRQTNSSRRKRRSSLFDM----VPEMPMDESP 182
HAQKYF+R+TN +RR+RRSSLFD+ V EM M++ P
Sbjct: 143 HAQKYFLRRTNLNRRRRRSSLFDITTETVTEMAMEQDP 180
>AT5G05790.1 | chr5:1740724-1741671 REVERSE LENGTH=278
Length = 277
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 48/70 (68%), Positives = 58/70 (82%)
Query: 103 ERKKGTPWTEEEHRMFLMGLQKLGKGDWRGISRNFVVSRTPTQVASHAQKYFIRQTNSSR 162
+R+KG PWTEEEHR FL+GL K GKGDWR ISRNFV S+TPTQVASHAQKY+ RQ + ++
Sbjct: 126 DRRKGVPWTEEEHRRFLLGLLKYGKGDWRNISRNFVGSKTPTQVASHAQKYYQRQLSGAK 185
Query: 163 RKRRSSLFDM 172
KRR S+ D+
Sbjct: 186 DKRRPSIHDI 195
>AT3G10580.1 | chr3:3307083-3308230 REVERSE LENGTH=288
Length = 287
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 47/83 (56%), Positives = 57/83 (68%), Gaps = 3/83 (3%)
Query: 91 PTHASCSTNGRGERKKGTPWTEEEHRMFLMGLQKLGKGDWRGISRNFVVSRTPTQVASHA 150
P T G G +KKG PW+ EEHR+FL GL K GKGDW+ ISR V SR+P QVASHA
Sbjct: 79 PEATKSKTQGTG-KKKGIPWSPEEHRLFLDGLNKYGKGDWKSISRECVTSRSPMQVASHA 137
Query: 151 QKYFIRQTNSSRRKRRSSLFDMV 173
QKYF+RQ N ++ +R S+ DM
Sbjct: 138 QKYFLRQKN--KKGKRFSIHDMT 158
>AT4G09450.1 | chr4:5983277-5984500 FORWARD LENGTH=201
Length = 200
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/85 (55%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Query: 89 DDPTHASCSTNGRGERKK-GTPWTEEEHRMFLMGLQKLGKGDWRGISRNFVVSRTPTQVA 147
DD + + +G KK G PW+EEE R+FL GL K GKGDW+ ISR V SRT TQVA
Sbjct: 71 DDYVKLTEAGESKGNGKKTGIPWSEEEQRLFLEGLNKFGKGDWKNISRYCVKSRTSTQVA 130
Query: 148 SHAQKYFIRQTNSSRRKRRSSLFDM 172
SHAQKYF RQ S +R S+ DM
Sbjct: 131 SHAQKYFARQKQESTNTKRPSIHDM 155
>AT5G23650.1 | chr5:7969812-7971019 FORWARD LENGTH=338
Length = 337
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 65/106 (61%), Gaps = 4/106 (3%)
Query: 101 RGERKKGTPWTEEEHRMFLMGLQKLGKGDWRGISRNFVVSRTPTQVASHAQKYFIRQTNS 160
+ +R++G PW EHR FL GL+K GKGDWR ISR+ VV+RT TQVASHAQKYF +
Sbjct: 113 KQKRRRGVPWKPFEHRQFLHGLKKYGKGDWRSISRHCVVTRTSTQVASHAQKYFAHINSE 172
Query: 161 SRRKRRSSLFDMV----PEMPMDESPVVVEQLMLHSTQDEATSSNQ 202
++++R S+ D+ + + P+ +++ + T +NQ
Sbjct: 173 DKKRKRPSIHDITIAENKSISTKQRPITWQKINNNGATASNTQANQ 218
>AT3G10590.1 | chr3:3310424-3311311 REVERSE LENGTH=207
Length = 206
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 56/82 (68%), Gaps = 1/82 (1%)
Query: 94 ASCSTNGRGERKKGTPWTEEEHRMFLMGLQKLGKGDWRGISRNFVVSRTPTQVASHAQKY 153
A S + R ++ PWTEEEHR+FL GL+K G+G S NFV ++TP QV+SHAQ Y
Sbjct: 97 AESSQSKRRKKDTPNPWTEEEHRLFLQGLKKYGEGASTLTSTNFVKTKTPRQVSSHAQ-Y 155
Query: 154 FIRQTNSSRRKRRSSLFDMVPE 175
+ RQ + +++++R S+FD+ E
Sbjct: 156 YKRQKSDNKKEKRRSIFDITLE 177
>AT3G09600.1 | chr3:2946459-2948270 FORWARD LENGTH=299
Length = 298
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 110 WTEEEHRMFLMGLQKLGKGDWRGISRNFVVSRTPTQVASHAQKYFIR 156
WTEEEH FL LQ + DW+ I +FV S+T Q+ SHAQKYF++
Sbjct: 46 WTEEEHDKFLEALQLFDR-DWKKI-EDFVGSKTVIQIRSHAQKYFLK 90
>AT5G02840.1 | chr5:648794-651212 FORWARD LENGTH=294
Length = 293
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 51/103 (49%), Gaps = 17/103 (16%)
Query: 110 WTEEEHRMFLMGLQKLGKGDWRGISRNFVVSRTPTQVASHAQKYFIR-QTNSS------- 161
WTE EH FL LQ + DW+ I +FV S+T Q+ SHAQKYF++ Q N +
Sbjct: 51 WTEGEHDKFLEALQLFDR-DWKKI-EDFVGSKTVIQIRSHAQKYFLKVQKNGTLAHVPPP 108
Query: 162 RRKRRSSLFDMVPEMPMDESPVVVEQLMLHSTQDEATSSNQLP 204
R KR+++ P + Q+ LH + T N LP
Sbjct: 109 RPKRKAA-------HPYPQKASKNAQMSLHVSMSFPTQINNLP 144
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.315 0.129 0.382
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,543,853
Number of extensions: 305242
Number of successful extensions: 1130
Number of sequences better than 1.0e-05: 21
Number of HSP's gapped: 1129
Number of HSP's successfully gapped: 25
Length of query: 366
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 266
Effective length of database: 8,364,969
Effective search space: 2225081754
Effective search space used: 2225081754
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 112 (47.8 bits)