BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0179800 Os01g0179800|AK069734
(421 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G24460.1 | chr3:8886160-8889717 REVERSE LENGTH=410 458 e-129
AT4G13345.1 | chr4:7767292-7769426 FORWARD LENGTH=395 448 e-126
AT2G33205.1 | chr2:14070987-14073211 REVERSE LENGTH=423 338 3e-93
AT3G06170.1 | chr3:1867520-1869738 FORWARD LENGTH=410 186 3e-47
AT1G16180.1 | chr1:5540905-5542670 FORWARD LENGTH=413 145 5e-35
>AT3G24460.1 | chr3:8886160-8889717 REVERSE LENGTH=410
Length = 409
Score = 458 bits (1179), Expect = e-129, Method: Compositional matrix adjust.
Identities = 213/377 (56%), Positives = 270/377 (71%), Gaps = 5/377 (1%)
Query: 47 NPMMARYVYAFVFLATNLLAWTLRDFGHPVLAELRRLRGSCQGAGYCLGAEGVLRVSLGC 106
NP MARYVY +FL NLLAW RD+G L ++ R + +C+G CLG +GVLRVSLGC
Sbjct: 36 NPWMARYVYGLIFLIANLLAWAARDYGRGALRKVTRFK-NCKGGENCLGTDGVLRVSLGC 94
Query: 107 FLFFFVMFLSTVRTRKTHDRRNSWHSEWWPAKIVLWMGFTVVPFFLPSPLIQLYGKIAHF 166
FLF+FVMFLST+ T KTH R+ WHS WW K+++W T++PF LPS +I LYG+IAHF
Sbjct: 95 FLFYFVMFLSTLGTSKTHSSRDRWHSGWWFVKLIMWPALTIIPFLLPSSIIHLYGEIAHF 154
Query: 167 GAGAFLVIQLVSVTRFITWLNDCCRSETNLKRCHMQVQVVSIAAYVGSILGVVLMYVWYA 226
GAG FL+IQL+SV FI WLN+C +S+ + +RC + V ++S +Y I+GV+LMY+WYA
Sbjct: 155 GAGVFLLIQLISVISFIQWLNECYQSQKDAERCRVYVMLLSTTSYTVCIVGVILMYIWYA 214
Query: 227 PRPSCKLNILFITVTLVLVQIMTGVSLSSKVKAGYLAPGLMGVYIVFLCWTAIRSEPHTE 286
P SC LNI FIT TL L+Q+MT ++L KV AGYL P LMG+Y+VF+CW AIRSEP E
Sbjct: 215 PDSSCLLNIFFITWTLFLIQLMTSIALHPKVNAGYLTPALMGLYVVFICWCAIRSEPVGE 274
Query: 287 ICNKKAEVATSADWVNXXXXXXXXXXXXXXXXXXGIDSKCLQFKKAESEQPE--DDDIPY 344
CN+KA + DW+ GIDS+C QFKK E++Q E +DD+PY
Sbjct: 275 SCNRKAAASNRTDWLTIISFVVALLAMVIATFSTGIDSQCFQFKKDENDQEEEAEDDVPY 334
Query: 345 GFGFFHFVFAMGAMYFAMLFVGWNANQTMEKWTIDVGWASTWVRVVNEWLAAIVYIWMVI 404
G+GFFHFVFA GAMYFAML +GWN + M+KWTIDVGW STWVRVVNEWLA VYIWM++
Sbjct: 335 GYGFFHFVFATGAMYFAMLLIGWNTHHPMKKWTIDVGWTSTWVRVVNEWLAVCVYIWMLV 394
Query: 405 APIVWKGGQVGSSPEGT 421
AP++ K + +P GT
Sbjct: 395 APLILKSRR--QTPTGT 409
>AT4G13345.1 | chr4:7767292-7769426 FORWARD LENGTH=395
Length = 394
Score = 448 bits (1153), Expect = e-126, Method: Compositional matrix adjust.
Identities = 213/367 (58%), Positives = 269/367 (73%), Gaps = 3/367 (0%)
Query: 47 NPMMARYVYAFVFLATNLLAWTLRDFGHPVLAELRRLRGSCQGAGYCLGAEGVLRVSLGC 106
NP MARYVY +FL NLLAW LRD+G L E+R+ + +C+ G CLG EGVLRVS GC
Sbjct: 29 NPWMARYVYGLIFLLANLLAWALRDYGRGALTEMRKFK-NCKEGGDCLGTEGVLRVSFGC 87
Query: 107 FLFFFVMFLSTVRTRKTHDRRNSWHSEWWPAKIVLWMGFTVVPFFLPSPLIQLYGKIAHF 166
FLF+F+MFLSTV T KTH R+ WHS WW AK+ + +G T+ PF LPS +IQ YG+IAHF
Sbjct: 88 FLFYFIMFLSTVGTSKTHSSRDKWHSGWWFAKLFMLLGLTIFPFLLPSSIIQFYGEIAHF 147
Query: 167 GAGAFLVIQLVSVTRFITWLNDCCRSETNLKRCHMQVQVVSIAAYVGSILGVVLMYVWYA 226
GAG FL+IQL+S+ FITWLN+C +++ + +RCH+ V +++ AY ILGV+LMY+WY
Sbjct: 148 GAGVFLLIQLISIISFITWLNECFQAQKDAERCHVHVMLLATTAYTVCILGVILMYIWYV 207
Query: 227 PRPSCKLNILFITVTLVLVQIMTGVSLSSKVKAGYLAPGLMGVYIVFLCWTAIRSEPHTE 286
P PSC LNI FIT TL L+Q+MT +SL K+ AG+L P LMG+Y+VF+CW AIRSEP E
Sbjct: 208 PEPSCLLNIFFITWTLFLIQLMTSISLHPKINAGFLTPALMGLYVVFICWCAIRSEPVGE 267
Query: 287 ICNKKAEVATSADWVNXXXXXXXXXXXXXXXXXXGIDSKCLQFKKAESEQPEDDDIPYGF 346
CN+KAE ++ DW+ G+DS+C QF+K E+ E+D IPYG+
Sbjct: 268 TCNRKAEGSSRTDWLTIISFVVALLAMVIATFSTGVDSQCFQFRKDENH--EEDAIPYGY 325
Query: 347 GFFHFVFAMGAMYFAMLFVGWNANQTMEKWTIDVGWASTWVRVVNEWLAAIVYIWMVIAP 406
GFFHFVFA GAMYFAML VGWN + +M+KWTIDVGW STWVR+VNEWLA VYIWM++AP
Sbjct: 326 GFFHFVFATGAMYFAMLLVGWNIHHSMKKWTIDVGWTSTWVRIVNEWLAVGVYIWMLVAP 385
Query: 407 IVWKGGQ 413
+V K Q
Sbjct: 386 MVLKSRQ 392
>AT2G33205.1 | chr2:14070987-14073211 REVERSE LENGTH=423
Length = 422
Score = 338 bits (867), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 175/376 (46%), Positives = 232/376 (61%), Gaps = 5/376 (1%)
Query: 47 NPMMARYVYAFVFLATNLLAWTLRDFGHPVLAELRRLRGSCQGAGYCLGAEGVLRVSLGC 106
+ ARY Y +FL NL AW +RD+ LA L + C GVLRVSLGC
Sbjct: 45 KSLRARYTYGTIFLIINLCAWFIRDYAQKALALLPYVSSCGPEGSRCFHTLGVLRVSLGC 104
Query: 107 FLFFFVMFLSTVRTRKTHDRRNSWHSEWWPAKIVLWMGFTVVPFFLPSPLIQLYGKIAHF 166
F+F+FVMFLST T K H+ +NSWHS+ W K L + V FF+P IQ+YG+IA
Sbjct: 105 FIFYFVMFLSTWNTMKLHEAQNSWHSDNWIFKFFLLVIVMVASFFIPQLYIQIYGEIARV 164
Query: 167 GAGAFLVIQLVSVTRFITWLNDCCRSETNLKRCHMQVQVVSIAAYVGSILGVVLMYVWYA 226
GAG FL +QLVSV FITW N+ + K+ V+SI Y+GS+ G+ +MY +Y
Sbjct: 165 GAGIFLGLQLVSVIEFITWWNNYWMPQNQSKQSCSFGLVMSIVFYIGSVCGIAVMYYFYG 224
Query: 227 PRPSCKLNILFITVTLVLVQIMTGVSLSSKVKA-GYLAPGLMGVYIVFLCWTAIRSEPHT 285
+C LNI FI+ T++L+ +M +SL SKVK G L+ G+M YIVFLCW+AIRSEP
Sbjct: 225 ASTACGLNIFFISWTVILLIVMMVISLHSKVKNRGLLSSGIMASYIVFLCWSAIRSEPSH 284
Query: 286 EICNKKAEVATSADWVNXXXXXXXXXXXXXXXXXXGIDSKCLQFKKAESEQPEDDDIPYG 345
CN + + DW GIDS+ +F+K E++ E+DDIPY
Sbjct: 285 TKCNAHTQ-NSHTDWTTILSFLIAIGAIVMATFSTGIDSESFRFRKDEAK--EEDDIPYS 341
Query: 346 FGFFHFVFAMGAMYFAMLFVGWNANQTMEKWTIDVGWASTWVRVVNEWLAAIVYIWMVIA 405
+GFFH VF++GAMYFAMLF+ WN + + EKW+IDVGW STWV++VNEW AA +Y+W +IA
Sbjct: 342 YGFFHLVFSLGAMYFAMLFISWNLSHSTEKWSIDVGWTSTWVKIVNEWFAAAIYLWKLIA 401
Query: 406 PIVWKGGQVGSSPEGT 421
PIV + +V P+ T
Sbjct: 402 PIV-RQHRVHEQPQPT 416
>AT3G06170.1 | chr3:1867520-1869738 FORWARD LENGTH=410
Length = 409
Score = 186 bits (471), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 115/378 (30%), Positives = 191/378 (50%), Gaps = 24/378 (6%)
Query: 51 ARYVYAFVFLATNLLAWTLRDFGHPVLAELRRLRGSCQGAGYCLGAEGVLRVSLGCFLFF 110
AR Y +F A+ +++W LR+ G P+L +L + S + VLRVS G FLFF
Sbjct: 29 ARIAYCGLFGASLVVSWILRETGAPLLEKLPWINTSDSYTKEWYQQQAVLRVSFGNFLFF 88
Query: 111 FVMFLSTVRTRKTHDRRNSWHSEWWPAKIVLWMGFTVVPFFLPSPLIQLYGKIAHFGAGA 170
+ L + + +DRR+SWH W K+++W V+ FF+P+ ++ LYG ++ FGAGA
Sbjct: 89 AIYALIMIGVKDQNDRRDSWHHGGWGLKMIVWFLLVVLMFFVPNVIVSLYGTLSKFGAGA 148
Query: 171 FLVIQLVSVTRFITWLNDCCRSETNLKRCHMQVQVVSIAAYVGSILGVVLMYVWYAPR-P 229
FL++Q+V + ND E + K+ ++ + V+SI Y+ + ++++W+ P
Sbjct: 149 FLLVQVVLLLDATHNWND-SWVEKDEKKWYIALLVISIVCYIATYTFSGILFIWFNPSGQ 207
Query: 230 SCKLNILFITVTLVLVQIMTGVSLSSKVKAGYLAPGLMGVYIVFLCWTAIRSEPHTEICN 289
C LN+ FI + ++L + ++L V L ++ VY ++C+T + SEPH +CN
Sbjct: 208 DCGLNVFFIVMPMILAFVFAIIALHPAVNGSLLPASVISVYCAYVCYTGLSSEPHDYVCN 267
Query: 290 --KKAEVATSADWVNXXXXXXXXXXXXXXXXXXGIDSKCLQ--------FKKAESEQPED 339
K++ ++ + G + L K A PED
Sbjct: 268 GLNKSKAVNASTLI--LGMLTTVLSVLYSALRAGSSTTFLSPPSSPRSGVKDALLGDPED 325
Query: 340 DD---------IPYGFGFFHFVFAMGAMYFAMLFVGWNANQTMEKWTIDVGWASTWVRVV 390
+ Y + FFH +FA+ +MY AML GW + + IDVGW S WV++
Sbjct: 326 GKKSGEAEARPVSYSYSFFHIIFALASMYAAMLLSGWT-DSSESATLIDVGWTSVWVKIC 384
Query: 391 NEWLAAIVYIWMVIAPIV 408
W+ A +YIW +IAP++
Sbjct: 385 TGWVTAGLYIWTLIAPLI 402
>AT1G16180.1 | chr1:5540905-5542670 FORWARD LENGTH=413
Length = 412
Score = 145 bits (365), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 104/383 (27%), Positives = 174/383 (45%), Gaps = 22/383 (5%)
Query: 51 ARYVYAFVFLATNLLAWTLRDFGHPVLAELRRLRGSCQGAGYC-LGAEGVLRVSLGCFLF 109
AR Y +F + +++W LR+ P++ +L + + + VLRVSLG FLF
Sbjct: 31 ARIAYCGLFALSLIVSWILREVAAPLMEKLPWINHFHKTPDREWFETDAVLRVSLGNFLF 90
Query: 110 FFVMFLSTVRTRKTHDRRNSWHSEWWPAKIVLWMGFTVVPFFLPSPLIQLYGKIAHFGAG 169
F ++ + + + D R+ H W KI+ W + FFLP+ +I Y ++ FGAG
Sbjct: 91 FSILSVMMIGVKNQKDPRDGIHHGGWMMKIICWCILVIFMFFLPNEIISFYESMSKFGAG 150
Query: 170 AFLVIQLVSVTRFITWLNDCCRSETNLKRCHMQVQVVSIAAYVGSILGVVLMYVWYAPR- 228
FL++Q+V + F+ ND + + + VVS+ Y+ + + ++ W+ P
Sbjct: 151 FFLLVQVVLLLDFVHGWNDTWVGYDE-QFWYAALLVVSLVCYLATFVFSGFLFHWFTPSG 209
Query: 229 PSCKLNILFITVTLVLVQIMTGVSLSSKVKAGYLAPGLMGVYIVFLCWTAIRSEPHTEIC 288
C LN FI +TL+ V + V L V L ++ +Y ++LC++ + SEP C
Sbjct: 210 HDCGLNTFFIIMTLIFVFVFAIVVLHPTVGGSILPASVISLYCMYLCYSGLASEPRDYEC 269
Query: 289 NKKAEVATSADWVNXXXXXXXXXXXXXXXXXXGIDSKCLQFKKAESEQPEDDDIP----- 343
N + + S L +S + E +P
Sbjct: 270 NGLHNHSKAVSTGTMTIGLLTTVLSVVYSAVRAGSSTTL-LSPPDSPRAEKPLLPIDGKA 328
Query: 344 -------------YGFGFFHFVFAMGAMYFAMLFVGWNANQTMEKWTIDVGWASTWVRVV 390
Y + FFH +F++ +MY AML GW+ + +DVGW S WVRVV
Sbjct: 329 EEKEEKENKKPVSYSYAFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRVV 388
Query: 391 NEWLAAIVYIWMVIAPIVWKGGQ 413
W A ++IW ++API++ +
Sbjct: 389 TSWATAGLFIWSLVAPILFPDRE 411
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.328 0.140 0.470
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 8,246,543
Number of extensions: 318410
Number of successful extensions: 737
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 722
Number of HSP's successfully gapped: 7
Length of query: 421
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 320
Effective length of database: 8,337,553
Effective search space: 2668016960
Effective search space used: 2668016960
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 113 (48.1 bits)