BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0178400 Os01g0178400|AK108850
(205 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G15415.2 | chr4:8817707-8819349 FORWARD LENGTH=523 230 5e-61
AT3G21650.1 | chr3:7621680-7623412 REVERSE LENGTH=547 226 5e-60
AT3G09880.1 | chr3:3029902-3031931 FORWARD LENGTH=500 224 3e-59
AT1G13460.1 | chr1:4616504-4618180 FORWARD LENGTH=493 221 2e-58
AT5G25510.1 | chr5:8882728-8884325 REVERSE LENGTH=501 218 2e-57
AT3G54930.1 | chr3:20351084-20352659 REVERSE LENGTH=498 215 1e-56
AT5G03470.1 | chr5:866795-868872 FORWARD LENGTH=496 211 2e-55
AT3G26030.1 | chr3:9517741-9519260 FORWARD LENGTH=478 206 6e-54
AT3G26020.4 | chr3:9514363-9516585 FORWARD LENGTH=530 185 1e-47
>AT4G15415.2 | chr4:8817707-8819349 FORWARD LENGTH=523
Length = 522
Score = 230 bits (586), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 108/174 (62%), Positives = 133/174 (76%)
Query: 2 QLTYCITQFIEKETKLAGTVIRGLLKYWPVTNSQKEMMFLGELEEVLELTDMAEFQKCMV 61
QL+YCI QF+EK+ KLA TVIRGLLKYWPVTNS KE+MFLGELEEVLE T AEFQ+CMV
Sbjct: 322 QLSYCIVQFVEKDFKLADTVIRGLLKYWPVTNSSKEVMFLGELEEVLEATQAAEFQRCMV 381
Query: 62 PLFRRIASCLNSSHFQVAERALFLWNNEHLFDMISQNRQVILPIIYPALERNTRWHWNQS 121
PLFR+IA CLNSSHFQVAERALFLWNN+H+ ++I+QN +VI+PI++PA+ERNTR HWNQ+
Sbjct: 382 PLFRQIARCLNSSHFQVAERALFLWNNDHIRNLITQNHKVIMPIVFPAMERNTRGHWNQA 441
Query: 122 VLNVTLNVKKMFLDMDERLLLACQNNFQXXXXXXXXXXXXXXLMWEQLERNAAA 175
V ++TLNV+K+ + D+ L C FQ W+ LE AA+
Sbjct: 442 VQSLTLNVRKVMAETDQILFDECLAKFQEDEANETEVVAKREATWKLLEELAAS 495
>AT3G21650.1 | chr3:7621680-7623412 REVERSE LENGTH=547
Length = 546
Score = 226 bits (577), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 106/174 (60%), Positives = 133/174 (76%)
Query: 2 QLTYCITQFIEKETKLAGTVIRGLLKYWPVTNSQKEMMFLGELEEVLELTDMAEFQKCMV 61
QL+YCI QF+EK+ KLA TVIRGLLKYWPVTNS KE+MFLGELEEVLE T AEFQ+CMV
Sbjct: 343 QLSYCIVQFVEKDFKLADTVIRGLLKYWPVTNSSKEVMFLGELEEVLEATQAAEFQRCMV 402
Query: 62 PLFRRIASCLNSSHFQVAERALFLWNNEHLFDMISQNRQVILPIIYPALERNTRWHWNQS 121
PL R+IA CLNSSHFQVAERALFLWNN+H+ ++I+QN +VI+PI++PALERNTR HWNQ+
Sbjct: 403 PLSRQIARCLNSSHFQVAERALFLWNNDHIRNLITQNHKVIMPIVFPALERNTRGHWNQA 462
Query: 122 VLNVTLNVKKMFLDMDERLLLACQNNFQXXXXXXXXXXXXXXLMWEQLERNAAA 175
V ++T+NV+K+ ++D+ L C FQ W++LE A +
Sbjct: 463 VQSLTINVRKVLCEIDQVLFDECLAKFQVEEVNKTEVKAKRERTWQRLEDLATS 516
>AT3G09880.1 | chr3:3029902-3031931 FORWARD LENGTH=500
Length = 499
Score = 224 bits (570), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 105/184 (57%), Positives = 127/184 (69%), Gaps = 5/184 (2%)
Query: 2 QLTYCITQFIEKETKLAGTVIRGLLKYWPVTNSQKEMMFLGELEEVLELTDMAEFQKCMV 61
QL+YCI QF+EK+ KLA TVIRGLLKYWPVTN KE +FLGELEEVLE T EFQ+CMV
Sbjct: 312 QLSYCIVQFVEKDYKLADTVIRGLLKYWPVTNCSKENLFLGELEEVLEATQPVEFQRCMV 371
Query: 62 PLFRRIASCLNSSHFQVAERALFLWNNEHLFDMISQNRQVILPIIYPALERNTRWHWNQS 121
PLF++I CL SSHFQVAERALFLWNNEH+ +I+QNR VILPIIYP LE+N + HWNQ+
Sbjct: 372 PLFQQIGRCLTSSHFQVAERALFLWNNEHIVGLIAQNRSVILPIIYPTLEKNIQSHWNQA 431
Query: 122 VLNVTLNVKKMFLDMDERLLLACQNNFQXXXXXXXXXXXXXXLMWEQL-----ERNAAAA 176
V +T N+KKMF++MD L CQ ++ W++L ER+
Sbjct: 432 VHGLTTNIKKMFMEMDPELFEECQRQYEEKQAKSKEVEEQRQYTWKRLAEAAAERDGGGG 491
Query: 177 CHPH 180
H
Sbjct: 492 EEDH 495
>AT1G13460.1 | chr1:4616504-4618180 FORWARD LENGTH=493
Length = 492
Score = 221 bits (563), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 106/169 (62%), Positives = 129/169 (76%)
Query: 2 QLTYCITQFIEKETKLAGTVIRGLLKYWPVTNSQKEMMFLGELEEVLELTDMAEFQKCMV 61
QL+YCITQF+EK+ KLA TVIRGLLK WPVTNS KE+MFL ELEEVLE T EFQ+CMV
Sbjct: 313 QLSYCITQFVEKDCKLADTVIRGLLKSWPVTNSSKEVMFLNELEEVLEATQPPEFQRCMV 372
Query: 62 PLFRRIASCLNSSHFQVAERALFLWNNEHLFDMISQNRQVILPIIYPALERNTRWHWNQS 121
PLFR++A CLNS HFQVAERALFLWNN+H+ ++I QNR+VILPII+PALERNT+ HWNQ+
Sbjct: 373 PLFRQVARCLNSLHFQVAERALFLWNNDHIENLIMQNRKVILPIIFPALERNTQKHWNQA 432
Query: 122 VLNVTLNVKKMFLDMDERLLLACQNNFQXXXXXXXXXXXXXXLMWEQLE 170
V ++TLNV+K+F D+D L C F+ W++LE
Sbjct: 433 VHSLTLNVQKIFNDIDAELFKDCLAKFREDESKEAEIGAKREATWKRLE 481
>AT5G25510.1 | chr5:8882728-8884325 REVERSE LENGTH=501
Length = 500
Score = 218 bits (555), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 102/174 (58%), Positives = 131/174 (75%), Gaps = 1/174 (0%)
Query: 2 QLTYCITQFIEKETKLAGTVIRGLLKYWPVTNSQKEMMFLGELEEVLELTDMAEFQKCMV 61
QL+YCITQFI+KE KL VI+GLLK+WP+TNSQKE+MFLGE+EE++E + EFQK MV
Sbjct: 307 QLSYCITQFIDKEPKLGSVVIKGLLKFWPITNSQKEVMFLGEVEEIVEAMSVMEFQKIMV 366
Query: 62 PLFRRIASCLNSSHFQVAERALFLWNNEHLFDMISQNRQVILPIIYPALERNTRWHWNQS 121
PLF RIA C+ SSHFQV+ERALFLWNN+ + ++I NRQ ILPI++ ALE+N + HWNQS
Sbjct: 367 PLFLRIACCVTSSHFQVSERALFLWNNDQIVNLIGHNRQAILPIMFTALEKNAQNHWNQS 426
Query: 122 VLNVTLNVKKMFLDMDERLLLACQNNFQXXXXXXXXXXXXXXLMWEQLERNAAA 175
VLN+TLNV+KMF +MDE L ++C F+ +W +LE NAA+
Sbjct: 427 VLNLTLNVRKMFCEMDEALFMSCHARFKEDEAKQCSAAEKRKEVWARLE-NAAS 479
>AT3G54930.1 | chr3:20351084-20352659 REVERSE LENGTH=498
Length = 497
Score = 215 bits (548), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 99/175 (56%), Positives = 130/175 (74%)
Query: 2 QLTYCITQFIEKETKLAGTVIRGLLKYWPVTNSQKEMMFLGELEEVLELTDMAEFQKCMV 61
QL YC+TQF+EK+ KLA TVIRGLLK+WP+TN QKE++FLGELEEVL+ T+ +EFQ+C+V
Sbjct: 321 QLAYCVTQFVEKDYKLADTVIRGLLKFWPLTNCQKEVLFLGELEEVLDATEPSEFQQCVV 380
Query: 62 PLFRRIASCLNSSHFQVAERALFLWNNEHLFDMISQNRQVILPIIYPALERNTRWHWNQS 121
PLF +I CLNS+HFQVAERALFLWNNEH+ +I+QN+ VI PII+ ALERN + HWNQ+
Sbjct: 381 PLFTQIGKCLNSAHFQVAERALFLWNNEHIVGLIAQNKDVIFPIIFEALERNMKGHWNQA 440
Query: 122 VLNVTLNVKKMFLDMDERLLLACQNNFQXXXXXXXXXXXXXXLMWEQLERNAAAA 176
V ++ NV++MFL+MD L C+ + L W++LE A+ A
Sbjct: 441 VHGLSENVRRMFLEMDTELFEECEKQYLENEAKACELLEQRELTWKRLEEAASLA 495
>AT5G03470.1 | chr5:866795-868872 FORWARD LENGTH=496
Length = 495
Score = 211 bits (538), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 99/182 (54%), Positives = 128/182 (70%)
Query: 2 QLTYCITQFIEKETKLAGTVIRGLLKYWPVTNSQKEMMFLGELEEVLELTDMAEFQKCMV 61
QL+YCI QF+EK+ KLA TVIRGLLK+WPVTN KE++FLGELEEVLE T EFQ+CMV
Sbjct: 312 QLSYCIVQFVEKDYKLADTVIRGLLKFWPVTNCTKEVLFLGELEEVLEATQTVEFQRCMV 371
Query: 62 PLFRRIASCLNSSHFQVAERALFLWNNEHLFDMISQNRQVILPIIYPALERNTRWHWNQS 121
PLF++IA CL+SS+FQVAERALFLWNNEH+ +I+QNR VILPII+ +LE+N HWNQ+
Sbjct: 372 PLFQQIARCLSSSNFQVAERALFLWNNEHVVGLIAQNRGVILPIIFASLEKNIESHWNQA 431
Query: 122 VLNVTLNVKKMFLDMDERLLLACQNNFQXXXXXXXXXXXXXXLMWEQLERNAAAACHPHP 181
V ++ N+K+MF++MD L CQ ++ W +L+ P
Sbjct: 432 VHGLSANIKRMFMEMDPELFEECQQQYEEKQAKSKQVEEQRQNRWRRLDEAVEEREREDP 491
Query: 182 VI 183
+I
Sbjct: 492 MI 493
>AT3G26030.1 | chr3:9517741-9519260 FORWARD LENGTH=478
Length = 477
Score = 206 bits (524), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 96/174 (55%), Positives = 125/174 (71%)
Query: 2 QLTYCITQFIEKETKLAGTVIRGLLKYWPVTNSQKEMMFLGELEEVLELTDMAEFQKCMV 61
QL+YC+ QF+EK+ KLA TVIRG+LKYWPVTNS KE+MFL ELEE+LE T + EF++CMV
Sbjct: 301 QLSYCVIQFVEKDCKLADTVIRGMLKYWPVTNSAKEIMFLNELEEILEATQLTEFERCMV 360
Query: 62 PLFRRIASCLNSSHFQVAERALFLWNNEHLFDMISQNRQVILPIIYPALERNTRWHWNQS 121
PL R+IA CL+SSHFQVAERAL+LWNN+H+ +++ QN ++ILPI++PALE+N HWNQ+
Sbjct: 361 PLSRQIAQCLSSSHFQVAERALYLWNNDHVTNLVRQNSRIILPIVFPALEKNGSSHWNQA 420
Query: 122 VLNVTLNVKKMFLDMDERLLLACQNNFQXXXXXXXXXXXXXXLMWEQLERNAAA 175
V N+T NV K+ D + L C + FQ W QLE A+
Sbjct: 421 VKNLTENVLKVLSDTNPDLFEECLHKFQEDQQKAEDTKKKNGETWRQLEEIVAS 474
>AT3G26020.4 | chr3:9514363-9516585 FORWARD LENGTH=530
Length = 529
Score = 185 bits (470), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 100/210 (47%), Positives = 121/210 (57%), Gaps = 48/210 (22%)
Query: 9 QFIEKETKLAGTVIRGLLKYWPVTNSQKEMMFLGELEEVLELTDMAEFQKCMVPLFRRIA 68
+F+EK+ KLA TVIRGLLKYWPVTNS KE+MFL ELEEVLE T EFQ+CMVPLFR+IA
Sbjct: 312 KFVEKDCKLADTVIRGLLKYWPVTNSSKEVMFLNELEEVLEATQPPEFQRCMVPLFRQIA 371
Query: 69 SCLNSSHFQ------------------------------------------------VAE 80
CLNS HFQ VAE
Sbjct: 372 RCLNSLHFQAISFRHTLTALLMRSRYSLPVISNEQMEELILRYGKYQCLGLLYSALGVAE 431
Query: 81 RALFLWNNEHLFDMISQNRQVILPIIYPALERNTRWHWNQSVLNVTLNVKKMFLDMDERL 140
RALFLWNN H+ ++I QNR+VILPII+PALERN + HWNQ+V ++TLNV+K+F D+D L
Sbjct: 432 RALFLWNNNHIENLIMQNRKVILPIIFPALERNAQKHWNQAVHSLTLNVRKIFHDLDPEL 491
Query: 141 LLACQNNFQXXXXXXXXXXXXXXLMWEQLE 170
C F+ W++LE
Sbjct: 492 FKECLAKFKEDESKAAETEAKREATWKRLE 521
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.325 0.135 0.426
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,567,557
Number of extensions: 120475
Number of successful extensions: 301
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 301
Number of HSP's successfully gapped: 10
Length of query: 205
Length of database: 11,106,569
Length adjustment: 94
Effective length of query: 111
Effective length of database: 8,529,465
Effective search space: 946770615
Effective search space used: 946770615
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 109 (46.6 bits)