BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0174500 Os01g0174500|AK070484
(303 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G28480.2 | chr3:10676266-10678262 REVERSE LENGTH=325 233 7e-62
AT3G28490.1 | chr3:10679150-10680654 REVERSE LENGTH=289 228 4e-60
AT5G18900.1 | chr5:6304409-6306166 REVERSE LENGTH=299 215 3e-56
AT4G25600.1 | chr4:13060712-13062359 FORWARD LENGTH=292 211 3e-55
AT3G06300.1 | chr3:1907744-1909675 FORWARD LENGTH=300 209 1e-54
AT2G17720.1 | chr2:7697513-7699174 FORWARD LENGTH=292 131 5e-31
AT4G35810.1 | chr4:16968921-16970358 FORWARD LENGTH=291 130 1e-30
AT1G20270.1 | chr1:7021383-7022923 REVERSE LENGTH=288 127 6e-30
AT5G66060.1 | chr5:26419481-26421118 FORWARD LENGTH=290 127 1e-29
AT4G35820.1 | chr4:16971221-16972429 FORWARD LENGTH=273 118 3e-27
AT2G23096.1 | chr2:9834766-9836235 REVERSE LENGTH=275 117 1e-26
AT2G43080.1 | chr2:17915755-17918599 FORWARD LENGTH=284 104 7e-23
AT4G33910.1 | chr4:16256943-16258614 REVERSE LENGTH=289 102 4e-22
>AT3G28480.2 | chr3:10676266-10678262 REVERSE LENGTH=325
Length = 324
Score = 233 bits (595), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 115/283 (40%), Positives = 171/283 (60%), Gaps = 31/283 (10%)
Query: 48 ASSSHLVFDPSKSKRLSWHPRIFLYEGFLSDMECDHLVSMGRGNMESSLAFTDGDRNSSY 107
S+S FDP++ +LSW PR+FLYEGFLSD ECDH + + +G +E S+ D D S
Sbjct: 44 TSASSFGFDPTRVTQLSWTPRVFLYEGFLSDEECDHFIKLAKGKLEKSMV-ADNDSGESV 102
Query: 108 NNIE--------------------DIVVSKIEDRISLWSFLPKENGESIQVLKYGVNRS- 146
+ + D +VS +E +++ W+FLP+ENGES+Q+L Y +
Sbjct: 103 ESEDSVSVVRQSSSFIANMDSLEIDDIVSNVEAKLAAWTFLPEENGESMQILHYENGQKY 162
Query: 147 ----GSIKEEPKSSSGAHRLATILMYLSDVKQGGETVFPRSEMKDAQAKEGAPSQCS--G 200
++ G HR+AT+LMYLS+V++GGETVFP + K Q K+ + ++C+ G
Sbjct: 163 EPHFDYFHDQANLELGGHRIATVLMYLSNVEKGGETVFPMWKGKATQLKDDSWTECAKQG 222
Query: 201 YAVRPAKGNAILLFNLRPDGETDKDSQYEECPVLEGEKWLAIKHINLRKFDYPKSSLASE 260
YAV+P KG+A+L FNL P+ TD +S + CPV+EGEKW A + I+++ F+ + +
Sbjct: 223 YAVKPRKGDALLFFNLHPNATTDSNSLHGSCPVVEGEKWSATRWIHVKSFE---RAFNKQ 279
Query: 261 DECTDEDDRCVSWAASGECDRNPVFMIGSSDYYGSCRKSCRVC 303
C DE+ C WA +GEC +NP +M+GS +G CRKSC+ C
Sbjct: 280 SGCMDENVSCEKWAKAGECQKNPTYMVGSDKDHGYCRKSCKAC 322
>AT3G28490.1 | chr3:10679150-10680654 REVERSE LENGTH=289
Length = 288
Score = 228 bits (580), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 114/267 (42%), Positives = 166/267 (62%), Gaps = 25/267 (9%)
Query: 56 DPSKSKRLSWHPRIFLYEGFLSDMECDHLVSMGRGNMESSLAFTDGD---------RNSS 106
DP++ +LSW PR FLY+GFLSD ECDHL+ + +G +E S+ D D R SS
Sbjct: 28 DPTRITQLSWTPRAFLYKGFLSDEECDHLIKLAKGKLEKSMVVADVDSGESEDSEVRTSS 87
Query: 107 ---YNNIEDIVVSKIEDRISLWSFLPKENGESIQVLKYGVNRS-----GSIKEEPKSSSG 158
+D +V+ +E +++ W+FLP+ENGE++Q+L Y + ++ G
Sbjct: 88 GMFLTKRQDDIVANVEAKLAAWTFLPEENGEALQILHYENGQKYDPHFDYFYDKKALELG 147
Query: 159 AHRLATILMYLSDVKQGGETVFPRSEMKDAQAKEGAPSQCS--GYAVRPAKGNAILLFNL 216
HR+AT+LMYLS+V +GGETVFP + K Q K+ + S+C+ GYAV+P KG+A+L FNL
Sbjct: 148 GHRIATVLMYLSNVTKGGETVFPNWKGKTPQLKDDSWSKCAKQGYAVKPRKGDALLFFNL 207
Query: 217 RPDGETDKDSQYEECPVLEGEKWLAIKHINLRKFDYPKSSLASEDECTDEDDRCVSWAAS 276
+G TD +S + CPV+EGEKW A + I++R F K C D+ + C WA +
Sbjct: 208 HLNGTTDPNSLHGSCPVIEGEKWSATRWIHVRSFGKKKLV------CVDDHESCQEWADA 261
Query: 277 GECDRNPVFMIGSSDYYGSCRKSCRVC 303
GEC++NP++M+GS G CRKSC+ C
Sbjct: 262 GECEKNPMYMVGSETSLGFCRKSCKAC 288
>AT5G18900.1 | chr5:6304409-6306166 REVERSE LENGTH=299
Length = 298
Score = 215 bits (547), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 120/274 (43%), Positives = 168/274 (61%), Gaps = 28/274 (10%)
Query: 53 LVFDPSKSKRLSWHPRIFLYEGFLSDMECDHLVSMGRGNMESSLAFTDGD---------R 103
+ +PSK K++S PR F+YEGFL+++ECDH+VS+ + +++ S A D D R
Sbjct: 30 VFVNPSKVKQVSSKPRAFVYEGFLTELECDHMVSLAKASLKRS-AVADNDSGESKFSEVR 88
Query: 104 NSSYNNI---EDIVVSKIEDRISLWSFLPKENGESIQVLKYGVNRS-----GSIKEEPKS 155
SS I +D +VS IED+IS W+FLPKENGE IQVL+Y + ++
Sbjct: 89 TSSGTFISKGKDPIVSGIEDKISTWTFLPKENGEDIQVLRYEHGQKYDAHFDYFHDKVNI 148
Query: 156 SSGAHRLATILMYLSDVKQGGETVFPRSEMKD----AQAKEGAPSQCS--GYAVRPAKGN 209
G HR+ATILMYLS+V +GGETVFP +E+ ++ KE S C+ G AV+P KG+
Sbjct: 149 VRGGHRMATILMYLSNVTKGGETVFPDAEIPSRRVLSENKEDL-SDCAKRGIAVKPRKGD 207
Query: 210 AILLFNLRPDGETDKDSQYEECPVLEGEKWLAIKHINLRKFDYPKSSLASEDECTDEDDR 269
A+L FNL PD D S + CPV+EGEKW A K I++ FD + CTD ++
Sbjct: 208 ALLFFNLHPDAIPDPLSLHGGCPVIEGEKWSATKWIHVDSFD---RIVTPSGNCTDMNES 264
Query: 270 CVSWAASGECDRNPVFMIGSSDYYGSCRKSCRVC 303
C WA GEC +NP +M+G+++ G CR+SC+ C
Sbjct: 265 CERWAVLGECTKNPEYMVGTTELPGYCRRSCKAC 298
>AT4G25600.1 | chr4:13060712-13062359 FORWARD LENGTH=292
Length = 291
Score = 211 bits (538), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 124/303 (40%), Positives = 169/303 (55%), Gaps = 28/303 (9%)
Query: 9 LVLVAAWLTFAPPGALASSRRFDLSIAQEKLVNSTGGSTASSSHL---VFDPSKSKRLSW 65
L+L+ + +PP SR+ ++K + S T +S L DP++ +LSW
Sbjct: 9 LILMITMSSSSPPFCSGGSRKE----LRDKEITSKSDDTQASYVLGSKFVDPTRVLQLSW 64
Query: 66 HPRIFLYEGFLSDMECDHLVSMGRGNMESSLAFTDGDRNSSYNNIEDIVVSKIEDRISLW 125
PR+FLY GFLS+ ECDHL+S+ + E DG D VV+ IE+++S W
Sbjct: 65 LPRVFLYRGFLSEEECDHLISLRKETTEVYSVDADGKTQL------DPVVAGIEEKVSAW 118
Query: 126 SFLPKENGESIQVLKYGVNRSGS----IKEEPKSSSGAHRLATILMYLSDVKQGGETVFP 181
+FLP ENG SI+V Y +SG EEP S LAT+++YLS+ QGGE +FP
Sbjct: 119 TFLPGENGGSIKVRSYTSEKSGKKLDYFGEEPSSVLHESLLATVVLYLSNTTQGGELLFP 178
Query: 182 RSEMKDAQA-KEGAPSQCSGYAVRPAKGNAILLFNLRPDGETDKDSQYEECPVLEGEKWL 240
SEMK + EG G +RP KGNAIL F + D S + CPV++GE +
Sbjct: 179 NSEMKPKNSCLEG------GNILRPVKGNAILFFTRLLNASLDGKSTHLRCPVVKGELLV 232
Query: 241 AIKHINLRKFDYPKSSLASEDECTDEDDRCVSWAASGECDRNPVFMIGSSDYYGSCRKSC 300
A K I +K ++ + EC+DED+ C WA GEC +NPV+MIGS DYYG+CRKSC
Sbjct: 233 ATKLIYAKK----QARIEESGECSDEDENCGRWAKLGECKKNPVYMIGSPDYYGTCRKSC 288
Query: 301 RVC 303
C
Sbjct: 289 NAC 291
>AT3G06300.1 | chr3:1907744-1909675 FORWARD LENGTH=300
Length = 299
Score = 209 bits (533), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 114/267 (42%), Positives = 163/267 (61%), Gaps = 26/267 (9%)
Query: 59 KSKRLSWHPRIFLYEGFLSDMECDHLVSMGRGNMESSLAFTDGD---------RNSSYNN 109
K K++S PR F+YEGFL+D+ECDHL+S+ + N++ S A D D R SS
Sbjct: 37 KVKQVSSKPRAFVYEGFLTDLECDHLISLAKENLQRS-AVADNDNGESQVSDVRTSSGTF 95
Query: 110 I---EDIVVSKIEDRISLWSFLPKENGESIQVLKYGVNRS-----GSIKEEPKSSSGAHR 161
I +D +VS IED++S W+FLPKENGE +QVL+Y + ++ + G HR
Sbjct: 96 ISKGKDPIVSGIEDKLSTWTFLPKENGEDLQVLRYEHGQKYDAHFDYFHDKVNIARGGHR 155
Query: 162 LATILMYLSDVKQGGETVFPRSE---MKDAQAKEGAPSQCS--GYAVRPAKGNAILLFNL 216
+AT+L+YLS+V +GGETVFP ++ + + S C+ G AV+P KGNA+L FNL
Sbjct: 156 IATVLLYLSNVTKGGETVFPDAQEFSRRSLSENKDDLSDCAKKGIAVKPKKGNALLFFNL 215
Query: 217 RPDGETDKDSQYEECPVLEGEKWLAIKHINLRKFDYPKSSLASEDECTDEDDRCVSWAAS 276
+ D D S + CPV+EGEKW A K I++ FD L + CTD ++ C WA
Sbjct: 216 QQDAIPDPFSLHGGCPVIEGEKWSATKWIHVDSFD---KILTHDGNCTDVNESCERWAVL 272
Query: 277 GECDRNPVFMIGSSDYYGSCRKSCRVC 303
GEC +NP +M+G+ + G+CR+SC+ C
Sbjct: 273 GECGKNPEYMVGTPEIPGNCRRSCKAC 299
>AT2G17720.1 | chr2:7697513-7699174 FORWARD LENGTH=292
Length = 291
Score = 131 bits (329), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 87/250 (34%), Positives = 127/250 (50%), Gaps = 25/250 (10%)
Query: 20 PPGALASSRRFDLSIAQEKLVNSTGGSTASSSHLVFDPSKSKRLSWHPRIFLYEGFLSDM 79
P SS+ DL+ K S+G + V + +SW PR +Y FL++
Sbjct: 46 PNANRNSSKTNDLTNIVRKSETSSGDEEGNGERWV------EVISWEPRAVVYHNFLTNE 99
Query: 80 ECDHLVSMGRGNMESSLAF---TDGDRNSSYNNI--------EDIVVSKIEDRISLWSFL 128
EC+HL+S+ + +M S T G ++S D VV IE RIS ++F+
Sbjct: 100 ECEHLISLAKPSMVKSTVVDEKTGGSKDSRVRTSSGTFLRRGHDEVVEVIEKRISDFTFI 159
Query: 129 PKENGESIQVLKYGVNRS-----GSIKEEPKSSSGAHRLATILMYLSDVKQGGETVFPRS 183
P ENGE +QVL Y V + +E + +G R+AT+LMYLSDV GGETVFP +
Sbjct: 160 PVENGEGLQVLHYQVGQKYEPHYDYFLDEFNTKNGGQRIATVLMYLSDVDDGGETVFPAA 219
Query: 184 EMK-DAQAKEGAPSQC--SGYAVRPAKGNAILLFNLRPDGETDKDSQYEECPVLEGEKWL 240
A S+C G +V P K +A+L +N+RPD D S + CPV++G KW
Sbjct: 220 RGNISAVPWWNELSKCGKEGLSVLPKKRDALLFWNMRPDASLDPSSLHGGCPVVKGNKWS 279
Query: 241 AIKHINLRKF 250
+ K ++ +F
Sbjct: 280 STKWFHVHEF 289
>AT4G35810.1 | chr4:16968921-16970358 FORWARD LENGTH=291
Length = 290
Score = 130 bits (326), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/209 (36%), Positives = 119/209 (56%), Gaps = 21/209 (10%)
Query: 63 LSWHPRIFLYEGFLSDMECDHLVSMGRGNM--------ESSLAFTDGDRNSS---YNNIE 111
+SW PR F+Y FL++ EC+HL+S+ + +M ++ + R SS N
Sbjct: 83 ISWEPRAFVYHNFLTNEECEHLISLAKPSMMKSKVVDVKTGKSIDSRVRTSSGTFLNRGH 142
Query: 112 DIVVSKIEDRISLWSFLPKENGESIQVLKYGVNR-----SGSIKEEPKSSSGAHRLATIL 166
D +V +IE+RIS ++F+P ENGE +QVL Y V + +E G R+AT+L
Sbjct: 143 DEIVEEIENRISDFTFIPPENGEGLQVLHYEVGQRYEPHHDYFFDEFNVRKGGQRIATVL 202
Query: 167 MYLSDVKQGGETVFP--RSEMKDAQAKEGAPSQC--SGYAVRPAKGNAILLFNLRPDGET 222
MYLSDV +GGETVFP + + D + SQC G +V P K +A+L ++++PD
Sbjct: 203 MYLSDVDEGGETVFPAAKGNVSDVPWWDEL-SQCGKEGLSVLPKKRDALLFWSMKPDASL 261
Query: 223 DKDSQYEECPVLEGEKWLAIKHINLRKFD 251
D S + CPV++G KW + K ++ +++
Sbjct: 262 DPSSLHGGCPVIKGNKWSSTKWFHVHEYN 290
>AT1G20270.1 | chr1:7021383-7022923 REVERSE LENGTH=288
Length = 287
Score = 127 bits (320), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 134/265 (50%), Gaps = 25/265 (9%)
Query: 5 IGAVLVLVAAWLTFAPPGALASSRRFDLSIAQEKLVNSTGGSTASSSHLVFDPSKSKRLS 64
+ VL+++ A+ F+ P S DLS + + G ++ LS
Sbjct: 27 LTIVLLMLLAFGVFSLPINNDESSPIDLSYFRRAATERSEGLGKRGDQW------TEVLS 80
Query: 65 WHPRIFLYEGFLSDMECDHLVSMGRGNMESSLAFTDGDRNSSYNNIE-----------DI 113
W PR F+Y FLS EC++L+S+ + +M S S + + D
Sbjct: 81 WEPRAFVYHNFLSKEECEYLISLAKPHMVKSTVVDSETGKSKDSRVRTSSGTFLRRGRDK 140
Query: 114 VVSKIEDRISLWSFLPKENGESIQVLKYGVNRS-----GSIKEEPKSSSGAHRLATILMY 168
++ IE RI+ ++F+P ++GE +QVL Y + +E + +G R+AT+LMY
Sbjct: 141 IIKTIEKRIADYTFIPADHGEGLQVLHYEAGQKYEPHYDYFVDEFNTKNGGQRMATMLMY 200
Query: 169 LSDVKQGGETVFPRSEMKDAQAK-EGAPSQC--SGYAVRPAKGNAILLFNLRPDGETDKD 225
LSDV++GGETVFP + M + S+C G +V+P G+A+L +++RPD D
Sbjct: 201 LSDVEEGGETVFPAANMNFSSVPWYNELSECGKKGLSVKPRMGDALLFWSMRPDATLDPT 260
Query: 226 SQYEECPVLEGEKWLAIKHINLRKF 250
S + CPV+ G KW + K +++ ++
Sbjct: 261 SLHGGCPVIRGNKWSSTKWMHVGEY 285
>AT5G66060.1 | chr5:26419481-26421118 FORWARD LENGTH=290
Length = 289
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 137/267 (51%), Gaps = 33/267 (12%)
Query: 7 AVLVLVAAWLTFAPPGALASSRRFDLSIAQEKLVNSTGGSTASSSHLVFDPSKSKR---- 62
+L+L+A + P SS+ DL+ K + +G D SK++R
Sbjct: 31 VILILLAFGILSVPSNNAGSSKANDLTSIVRKTLQRSGE----------DDSKNERWVEI 80
Query: 63 LSWHPRIFLYEGFLSDMECDHLVSMGRGNMESSLAFTDGDRNSSYNNIE----------- 111
+SW PR +Y FL+ EC +L+ + + +ME S + S+ + +
Sbjct: 81 ISWEPRASVYHNFLTKEECKYLIELAKPHMEKSTVVDEKTGKSTDSRVRTSSGTFLARGR 140
Query: 112 DIVVSKIEDRISLWSFLPKENGESIQVLKYGVNRS-----GSIKEEPKSSSGAHRLATIL 166
D + +IE RIS ++F+P E+GE +QVL Y + + +E + +G R+AT+L
Sbjct: 141 DKTIREIEKRISDFTFIPVEHGEGLQVLHYEIGQKYEPHYDYFMDEYNTRNGGQRIATVL 200
Query: 167 MYLSDVKQGGETVFPRSEMK-DAQAKEGAPSQC--SGYAVRPAKGNAILLFNLRPDGETD 223
MYLSDV++GGETVFP ++ A S+C G +V+P G+A+L +++ PD D
Sbjct: 201 MYLSDVEEGGETVFPAAKGNYSAVPWWNELSECGKGGLSVKPKMGDALLFWSMTPDATLD 260
Query: 224 KDSQYEECPVLEGEKWLAIKHINLRKF 250
S + C V++G KW + K + + ++
Sbjct: 261 PSSLHGGCAVIKGNKWSSTKWLRVHEY 287
>AT4G35820.1 | chr4:16971221-16972429 FORWARD LENGTH=273
Length = 272
Score = 118 bits (296), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 74/185 (40%), Positives = 107/185 (57%), Gaps = 33/185 (17%)
Query: 63 LSWHPRIFLYEGFL--------SDMECDHLVSMGRGNMESS--------LAFTDGDRNSS 106
++ PR F+Y FL ++ ECDHL+S+ + +M S L R SS
Sbjct: 91 ITKEPRAFVYHNFLALFFKICKTNEECDHLISLAKPSMARSKVRNALTGLGEESSSRTSS 150
Query: 107 YNNI---EDIVVSKIEDRISLWSFLPKENGESIQVLKYGVNRSGSIKEEPKSSSGAHRLA 163
I D +V +IE RIS ++F+P+ENGE++QV+ Y V + K EP G R+A
Sbjct: 151 GTFIRSGHDKIVKEIEKRISEFTFIPQENGETLQVINYEVGQ----KFEP-HFDGFQRIA 205
Query: 164 TILMYLSDVKQGGETVFPRSEMKDAQAKEGAPSQCSGYAVRPAKGNAILLFNLRPDGETD 223
T+LMYLSDV +GGETVFP E K ++K+G +VRP KG+A+L +++RPDG D
Sbjct: 206 TVLMYLSDVDKGGETVFP--EAKGIKSKKGV-------SVRPKKGDALLFWSMRPDGSRD 256
Query: 224 KDSQY 228
S++
Sbjct: 257 PSSKH 261
>AT2G23096.1 | chr2:9834766-9836235 REVERSE LENGTH=275
Length = 274
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 112/205 (54%), Gaps = 17/205 (8%)
Query: 63 LSWHPRIFLYEGFLSDMECDHLVSMGRGNME-SSLAFTDGDRNSSYNNIEDI-------- 113
LSW+PR+F F + +C+ ++ M + ++ S+LA G+ + N +
Sbjct: 71 LSWNPRVFYLPNFATKQQCEAVIDMAKPKLKPSTLALRKGETAETTQNYRSLHQHTDEDE 130
Query: 114 --VVSKIEDRISLWSFLPKENGESIQVLKYGVNRSGSIKEEPKSSSG-----AHRLATIL 166
V++ IE++I+L + PK+ ES +L+Y + + + S+ + R+ T L
Sbjct: 131 SGVLAAIEEKIALATRFPKDYYESFNILRYQLGQKYDSHYDAFHSAEYGPLISQRVVTFL 190
Query: 167 MYLSDVKQGGETVFPRSEMKDAQAKEGAPSQCSGYAVRPAKGNAILLFNLRPDGETDKDS 226
++LS V++GGET+FP ++ + +C G V+P +G+AI +NL P+G D+ S
Sbjct: 191 LFLSSVEEGGETMFPFENGRNMNGRYDY-EKCVGLKVKPRQGDAIFFYNLFPNGTIDQTS 249
Query: 227 QYEECPVLEGEKWLAIKHINLRKFD 251
+ CPV++GEKW+A K I + +D
Sbjct: 250 LHGSCPVIKGEKWVATKWIRDQTYD 274
>AT2G43080.1 | chr2:17915755-17918599 FORWARD LENGTH=284
Length = 283
Score = 104 bits (259), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 105/203 (51%), Gaps = 21/203 (10%)
Query: 59 KSKRLSWHPRIFLYEGFLSDMECDHLVSMGRGNMESSLAF--------TDGDRNSSYNNI 110
K + +SW PRI + FLS EC++L ++ R ++ S R SS +
Sbjct: 76 KPEVVSWSPRIIVLHDFLSPEECEYLKAIARPRLQVSTVVDVKTGKGVKSDVRTSSGMFL 135
Query: 111 EDI-----VVSKIEDRISLWSFLPKENGESIQVLKYGVNRSGSIKEEPKSSS-----GAH 160
+ ++ IE RI+++S +P ENGE IQVL+Y + + + + G
Sbjct: 136 THVERSYPIIQAIEKRIAVFSQVPAENGELIQVLRYEPQQFYKPHHDYFADTFNLKRGGQ 195
Query: 161 RLATILMYLSDVKQGGETVFPRSEMKDAQAKEGAPSQCSGYAVRPAKGNAILLFNLRPDG 220
R+AT+LMYL+D +GGET FP + D G +V+P KG+A+L +++ DG
Sbjct: 196 RVATMLMYLTDDVEGGETYFPLAGDGDCTC---GGKIMKGISVKPTKGDAVLFWSMGLDG 252
Query: 221 ETDKDSQYEECPVLEGEKWLAIK 243
++D S + C VL GEKW A K
Sbjct: 253 QSDPRSIHGGCEVLSGEKWSATK 275
>AT4G33910.1 | chr4:16256943-16258614 REVERSE LENGTH=289
Length = 288
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 105/205 (51%), Gaps = 26/205 (12%)
Query: 63 LSWHPRIFLYEGFLSDMECDHLVSMGRGNME-SSLAF--------TDGDRNSSYNNIEDI 113
LSW PR + F + +C ++ + N++ S+LA T G R SS I
Sbjct: 81 LSWRPRAIYFPNFATAEQCQAIIERAKVNLKPSALALRKGETAENTKGTRTSSGTFISAS 140
Query: 114 VVSK-----IEDRISLWSFLPKENGESIQVLKYGVNRS--------GSIKEEPKSSSGAH 160
S +E +I+ + +P+ +GES +L+Y + + + P+SS
Sbjct: 141 EESTGALDFVERKIARATMIPRSHGESFNILRYELGQKYDSHYDVFNPTEYGPQSS---Q 197
Query: 161 RLATILMYLSDVKQGGETVFPRSEMKDAQAKEGAPSQCSGYAVRPAKGNAILLFNLRPDG 220
R+A+ L+YLSDV++GGET+FP + QC G V+P KG+ +L +++ P+G
Sbjct: 198 RIASFLLYLSDVEEGGETMFPFENGSNMGIGYDY-KQCIGLKVKPRKGDGLLFYSVFPNG 256
Query: 221 ETDKDSQYEECPVLEGEKWLAIKHI 245
D+ S + CPV +GEKW+A K I
Sbjct: 257 TIDQTSLHGSCPVTKGEKWVATKWI 281
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.315 0.132 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,348,930
Number of extensions: 322471
Number of successful extensions: 837
Number of sequences better than 1.0e-05: 13
Number of HSP's gapped: 792
Number of HSP's successfully gapped: 13
Length of query: 303
Length of database: 11,106,569
Length adjustment: 98
Effective length of query: 205
Effective length of database: 8,419,801
Effective search space: 1726059205
Effective search space used: 1726059205
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 111 (47.4 bits)