BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0168100 Os01g0168100|AK121992
(593 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G30500.1 | chr2:12998329-13000072 REVERSE LENGTH=518 154 2e-37
AT5G58320.2 | chr5:23577728-23579641 FORWARD LENGTH=559 144 2e-34
AT1G03080.1 | chr1:731794-737332 REVERSE LENGTH=1734 137 2e-32
AT3G22790.1 | chr3:8052446-8057888 REVERSE LENGTH=1729 128 7e-30
AT4G14760.1 | chr4:8475718-8481094 FORWARD LENGTH=1711 126 4e-29
AT4G02710.1 | chr4:1193516-1197061 REVERSE LENGTH=1112 125 5e-29
AT5G10500.1 | chr5:3305418-3308039 FORWARD LENGTH=849 120 3e-27
AT2G22560.1 | chr2:9585892-9588838 FORWARD LENGTH=948 115 5e-26
AT1G09720.1 | chr1:3144438-3147303 REVERSE LENGTH=929 112 6e-25
AT2G47920.1 | chr2:19616003-19616761 FORWARD LENGTH=226 89 7e-18
AT1G03470.1 | chr1:866217-867493 REVERSE LENGTH=270 87 2e-17
AT1G58210.1 | chr1:21553621-21558056 FORWARD LENGTH=1247 70 3e-12
AT4G03153.1 | chr4:1394845-1395588 REVERSE LENGTH=216 66 6e-11
AT5G05180.1 | chr5:1536924-1538318 FORWARD LENGTH=433 66 7e-11
AT1G64330.1 | chr1:23872172-23873970 FORWARD LENGTH=556 55 2e-07
>AT2G30500.1 | chr2:12998329-13000072 REVERSE LENGTH=518
Length = 517
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 67/95 (70%), Positives = 80/95 (84%)
Query: 2 KRMQRMPTRKSHSWWWDSHISPKNSKWLAENLEEMDKQVKDMLKLIEDEGDSFAKKAEMY 61
K+ +R T+KSHSWWWDSH PKNSKWLAENLE+MD +V MLKLIE++ DSFAKKA+MY
Sbjct: 10 KQFKRSMTKKSHSWWWDSHNCPKNSKWLAENLEKMDDRVNHMLKLIEEDADSFAKKAQMY 69
Query: 62 FERRPLLVTHVENFYRMYRALAERYDNVTGELRKN 96
F++RP L+ VE FYRMYRALAERYD +GEL+KN
Sbjct: 70 FQKRPELIQLVEEFYRMYRALAERYDQASGELQKN 104
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 62/106 (58%), Gaps = 15/106 (14%)
Query: 489 LLTDVTARDEKIREMDSHLHQLHLEHVKLIAEADAVTKAVXXXXXXXXXXXXXXXXQKLM 548
L ++ R+EKI+E + H+ +LH+E V+L + +T+ V ++
Sbjct: 426 LREEIGKREEKIKETEKHMEELHMEQVRLRRRSSELTEEVERT--------------RVS 471
Query: 549 VSDGAEGKREAIRQLCFSLEHYRHGYQQLRQLLQGH-HKRPLVMAN 593
S+ AE KREAIRQLC SL+HYR GY +L +++ GH KR +V++
Sbjct: 472 ASEMAEQKREAIRQLCMSLDHYRDGYDRLWRVVAGHKSKRVVVLST 517
>AT5G58320.2 | chr5:23577728-23579641 FORWARD LENGTH=559
Length = 558
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 62/97 (63%), Positives = 79/97 (81%)
Query: 2 KRMQRMPTRKSHSWWWDSHISPKNSKWLAENLEEMDKQVKDMLKLIEDEGDSFAKKAEMY 61
K ++R+ + KS+ WWWDSHI KNSKWL NL+EMD+ VK M+KLIE++ DSFAKKAEMY
Sbjct: 10 KSIKRVESTKSNPWWWDSHIGLKNSKWLENNLDEMDRSVKRMVKLIEEDADSFAKKAEMY 69
Query: 62 FERRPLLVTHVENFYRMYRALAERYDNVTGELRKNIP 98
++ RP L+ V+ F+RMYRALAERY+N+TGELRK P
Sbjct: 70 YQSRPELIALVDEFHRMYRALAERYENITGELRKGSP 106
>AT1G03080.1 | chr1:731794-737332 REVERSE LENGTH=1734
Length = 1733
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 56/84 (66%), Positives = 71/84 (84%)
Query: 11 KSHSWWWDSHISPKNSKWLAENLEEMDKQVKDMLKLIEDEGDSFAKKAEMYFERRPLLVT 70
K +SWWWDSHISPKNSKWL ENL +MD +VK M+K+IE++ DSFA++AEMY+++RP L+
Sbjct: 10 KRYSWWWDSHISPKNSKWLQENLTDMDSKVKQMIKVIEEDADSFARRAEMYYKKRPELMK 69
Query: 71 HVENFYRMYRALAERYDNVTGELR 94
VE FYR YRALAERYD+ TG +R
Sbjct: 70 LVEEFYRAYRALAERYDHATGVIR 93
>AT3G22790.1 | chr3:8052446-8057888 REVERSE LENGTH=1729
Length = 1728
Score = 128 bits (322), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 54/85 (63%), Positives = 71/85 (83%), Gaps = 1/85 (1%)
Query: 9 TRKSHSWWWDSHISPKNSKWLAENLEEMDKQVKDMLKLIEDEGDSFAKKAEMYFERRPLL 68
+R+ +SWWWDSHI PKNSKW+ +NL +MD +VK M+KLIE++ DSFA++AEMY+++RP L
Sbjct: 9 SRRLYSWWWDSHI-PKNSKWIQQNLSDMDSKVKAMIKLIEEDADSFARRAEMYYKKRPEL 67
Query: 69 VTHVENFYRMYRALAERYDNVTGEL 93
+ VE FYR YRALAERYD+ T EL
Sbjct: 68 MKLVEEFYRAYRALAERYDHATVEL 92
>AT4G14760.1 | chr4:8475718-8481094 FORWARD LENGTH=1711
Length = 1710
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 73/95 (76%), Gaps = 1/95 (1%)
Query: 1 MKRMQRMPTRKSHSWWWDSHISPKNSKWLAENLEEMDKQVKDMLKLIEDEGDSFAKKAEM 60
M + + + + +SWWWDSHI PKNSKW+ +NL +MD +VK M+KLIE + DSFA++A+M
Sbjct: 1 MASLSQSESGRLYSWWWDSHI-PKNSKWIQDNLADMDSKVKTMIKLIEADADSFARRADM 59
Query: 61 YFERRPLLVTHVENFYRMYRALAERYDNVTGELRK 95
YF++RP L+ VE YR YRALAERYD+ T ELR+
Sbjct: 60 YFKKRPELMKLVEELYRAYRALAERYDHTTVELRR 94
>AT4G02710.1 | chr4:1193516-1197061 REVERSE LENGTH=1112
Length = 1111
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 50/87 (57%), Positives = 70/87 (80%)
Query: 9 TRKSHSWWWDSHISPKNSKWLAENLEEMDKQVKDMLKLIEDEGDSFAKKAEMYFERRPLL 68
+++ +SWWWDSH +PKNSKWL +NL +MD VK M+K++E++ DSFA++AEMY+ +RP L
Sbjct: 9 SKRMYSWWWDSHNTPKNSKWLQDNLADMDSNVKQMIKVLEEDADSFARRAEMYYRKRPEL 68
Query: 69 VTHVENFYRMYRALAERYDNVTGELRK 95
+ VE FYR YRALAERY++ TG + K
Sbjct: 69 MKLVEEFYRAYRALAERYNHATGVIHK 95
>AT5G10500.1 | chr5:3305418-3308039 FORWARD LENGTH=849
Length = 848
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 50/91 (54%), Positives = 72/91 (79%)
Query: 4 MQRMPTRKSHSWWWDSHISPKNSKWLAENLEEMDKQVKDMLKLIEDEGDSFAKKAEMYFE 63
M R ++SWWW SH+ K SKWL ENL++++++V+ LKL+EDEGDSFAK+AEMY++
Sbjct: 1 MLRRAASNAYSWWWASHVRTKQSKWLEENLQDIEEKVEYALKLLEDEGDSFAKRAEMYYK 60
Query: 64 RRPLLVTHVENFYRMYRALAERYDNVTGELR 94
RRP L++ VE ++ YRALAERYD+++ EL+
Sbjct: 61 RRPELISFVEESFKAYRALAERYDHISKELQ 91
>AT2G22560.1 | chr2:9585892-9588838 FORWARD LENGTH=948
Length = 947
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 75/91 (82%), Gaps = 1/91 (1%)
Query: 4 MQRMPTRKSHSWWWDSHISPKNSKWLAENLEEMDKQVKDMLKLIEDEGDSFAKKAEMYFE 63
+QR + ++SWWW SHI K SKWL +NL++++++V+ +LKL++++GDSFAK+AEMY++
Sbjct: 2 LQRAASN-AYSWWWASHIRTKQSKWLEQNLQDIEEKVQYVLKLLQEDGDSFAKRAEMYYK 60
Query: 64 RRPLLVTHVENFYRMYRALAERYDNVTGELR 94
+RP L++ VE YR YRALAERYD+++ EL+
Sbjct: 61 KRPELISFVEESYRAYRALAERYDHISTELQ 91
>AT1G09720.1 | chr1:3144438-3147303 REVERSE LENGTH=929
Length = 928
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 47/83 (56%), Positives = 66/83 (79%)
Query: 12 SHSWWWDSHISPKNSKWLAENLEEMDKQVKDMLKLIEDEGDSFAKKAEMYFERRPLLVTH 71
++SWWW SHI K SKWL NL++M+++VK LK+I+ +GDSFAK+AEMY+ +RP +V
Sbjct: 9 AYSWWWASHIRTKQSKWLEHNLQDMEEKVKYTLKIIDGDGDSFAKRAEMYYRKRPEIVNF 68
Query: 72 VENFYRMYRALAERYDNVTGELR 94
VE +R YRALAERYD+++ EL+
Sbjct: 69 VEEAFRSYRALAERYDHLSTELQ 91
>AT2G47920.1 | chr2:19616003-19616761 FORWARD LENGTH=226
Length = 225
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 59/79 (74%)
Query: 11 KSHSWWWDSHISPKNSKWLAENLEEMDKQVKDMLKLIEDEGDSFAKKAEMYFERRPLLVT 70
KS WW++SH S K+S+WL L E+D + K MLKL++ DSFA++AE Y+++RP L++
Sbjct: 7 KSRWWWFESHKSSKHSQWLQSTLAEIDAKTKAMLKLLDGNADSFAQRAETYYKKRPELIS 66
Query: 71 HVENFYRMYRALAERYDNV 89
VE+FYR +R+LA +D++
Sbjct: 67 FVEDFYRAHRSLAVNFDHL 85
>AT1G03470.1 | chr1:866217-867493 REVERSE LENGTH=270
Length = 269
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
Query: 12 SHSWWW-DSHISPKNSKWLAENLEEMDKQVKDMLKLIEDEGDSFAKKAEMYFERRPLLVT 70
S WWW +H + S WL L E+D++ K+ML++I+++ DSFA +AEMY+++RP L+
Sbjct: 5 SSKWWWIGNHNTTNFSPWLHSTLSELDEKTKEMLRVIDEDADSFAARAEMYYKKRPELIA 64
Query: 71 HVENFYRMYRALAERYD 87
VE FYR +R+LAERYD
Sbjct: 65 MVEEFYRSHRSLAERYD 81
>AT1G58210.1 | chr1:21553621-21558056 FORWARD LENGTH=1247
Length = 1246
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 45/55 (81%)
Query: 39 QVKDMLKLIEDEGDSFAKKAEMYFERRPLLVTHVENFYRMYRALAERYDNVTGEL 93
+V+ LK+I+++GD+FAK+AEMY+ +RP +V VE +R YRALAERYD+++ EL
Sbjct: 335 RVEYTLKIIDEDGDTFAKRAEMYYRKRPEIVNFVEEAFRSYRALAERYDHLSREL 389
>AT4G03153.1 | chr4:1394845-1395588 REVERSE LENGTH=216
Length = 215
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 51/78 (65%), Gaps = 5/78 (6%)
Query: 15 WWW--DSHISPKNSKWLAENLEEMDKQVKDMLKLI---EDEGDSFAKKAEMYFERRPLLV 69
WWW +H + +S WL L E+D + K+ML +I EDEGDS K+A++ +E +P L+
Sbjct: 7 WWWIGANHNTSNSSPWLNSTLSELDSKTKEMLSVIDEVEDEGDSLMKRAKINYENKPKLI 66
Query: 70 THVENFYRMYRALAERYD 87
+E YR +R+LA+++D
Sbjct: 67 ELLEELYRSHRSLAQKHD 84
>AT5G05180.1 | chr5:1536924-1538318 FORWARD LENGTH=433
Length = 432
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 149/320 (46%), Gaps = 61/320 (19%)
Query: 272 LETE---IIKLQDIVKNFEGDLAKMSQEKLQLKAQVKELEQASRSLDDSSAQIMKLQEII 328
+ETE ++++Q V + E +L+ +S + + V E E + LD S ++I KL+E++
Sbjct: 163 IETERKRVLEVQRQVVDLETELSDLS---FKFEHLVNEHEVSRDCLDVSFSEISKLREML 219
Query: 329 KDLQRRLDNDSNEKKMLEERAIEFEQVRKELEGSRTEVAELQATINNLKADLGRALEEKS 388
D Q+ N S EK L ++ E + E++ R EV ELQA I+ LK DL E
Sbjct: 220 CDCQQ---NFSIEKTKLVDQIKHSEAEKMEMQ--RKEV-ELQAEISALKTDLATRGE--- 270
Query: 389 QLESRINDLE-HTIACNLEEFSQEKSSLGAEIQKLKEANASLEGKLTSTESQLQQLHXXX 447
+E+ D + H + ++ EK + AE+ LK ++ S + Q+QQ+
Sbjct: 271 HIEALNKDFDKHKLRYDM--LMAEKDGVCAEVDNLK-------AEMRSRDIQIQQMEEQ- 320
Query: 448 XXXXXXXXXXXXDLNQAIADXXXXXXXXXXXXXXVDNKVASLLTDVTARDEKIREMDSHL 507
LNQ + K L+++ + E+ + +
Sbjct: 321 -------------LNQLVY------------------KQTELVSESGNAKNTVEELKAVV 349
Query: 508 HQLHLEHVKLIAEADAVTKAVXXXXXXXXXXXXXXXXQKLMVSDGAEGKREAIRQLCFSL 567
+L +E V+L ++A K V Q+ +S G E KREAIRQLCFSL
Sbjct: 350 KELEIE-VELQSKA---KKTVEELRATVWEMEKHAELQRNAISQGEEEKREAIRQLCFSL 405
Query: 568 EHYRHGYQQLRQLLQGHHKR 587
+HY+ GY+QL L G++++
Sbjct: 406 DHYKSGYKQLLWYLSGNNQQ 425
>AT1G64330.1 | chr1:23872172-23873970 FORWARD LENGTH=556
Length = 555
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 56/94 (59%), Gaps = 6/94 (6%)
Query: 4 MQRMPTRKSHSWWWDSHISPKNSKWLAENLEEMDKQVKDMLKLIEDEGDSFAKKAEMYFE 63
M+++ R S +++ H+ P N + L E+D++VK +L ++E GD ++
Sbjct: 1 MRKLSIRDSLKSFFEPHLHPDNGESLKGTKTEIDEKVKKILGIVES-GDIEEDES----- 54
Query: 64 RRPLLVTHVENFYRMYRALAERYDNVTGELRKNI 97
+R ++ V++FY+ Y +L +YD++TGE+RK +
Sbjct: 55 KRLVVAELVKDFYKEYESLYHQYDDLTGEIRKKV 88
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.312 0.128 0.351
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 9,990,541
Number of extensions: 357287
Number of successful extensions: 3214
Number of sequences better than 1.0e-05: 79
Number of HSP's gapped: 3143
Number of HSP's successfully gapped: 128
Length of query: 593
Length of database: 11,106,569
Length adjustment: 104
Effective length of query: 489
Effective length of database: 8,255,305
Effective search space: 4036844145
Effective search space used: 4036844145
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 114 (48.5 bits)