BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0167900 Os01g0167900|AK072705
(432 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G58320.2 | chr5:23577728-23579641 FORWARD LENGTH=559 175 5e-44
AT2G30500.1 | chr2:12998329-13000072 REVERSE LENGTH=518 169 4e-42
AT1G03080.1 | chr1:731794-737332 REVERSE LENGTH=1734 146 3e-35
AT4G02710.1 | chr4:1193516-1197061 REVERSE LENGTH=1112 139 4e-33
AT3G22790.1 | chr3:8052446-8057888 REVERSE LENGTH=1729 129 2e-30
AT4G14760.1 | chr4:8475718-8481094 FORWARD LENGTH=1711 127 1e-29
AT2G22560.1 | chr2:9585892-9588838 FORWARD LENGTH=948 118 7e-27
AT5G10500.1 | chr5:3305418-3308039 FORWARD LENGTH=849 114 1e-25
AT1G09720.1 | chr1:3144438-3147303 REVERSE LENGTH=929 112 3e-25
AT1G03470.1 | chr1:866217-867493 REVERSE LENGTH=270 93 3e-19
AT2G47920.1 | chr2:19616003-19616761 FORWARD LENGTH=226 89 3e-18
AT1G58210.1 | chr1:21553621-21558056 FORWARD LENGTH=1247 74 2e-13
AT4G03153.1 | chr4:1394845-1395588 REVERSE LENGTH=216 65 7e-11
AT1G64330.1 | chr1:23872172-23873970 FORWARD LENGTH=556 49 4e-06
>AT5G58320.2 | chr5:23577728-23579641 FORWARD LENGTH=559
Length = 558
Score = 175 bits (443), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 115/284 (40%), Positives = 157/284 (55%), Gaps = 49/284 (17%)
Query: 2 KPPLERNPTKKRHSWWWDSHISPKNSKWLAENLEEMDKQVKEMLQLIEEDGDSFAKKAQM 61
K ++R + K + WWWDSHI KNSKWL NL+EMD+ VK M++LIEED DSFAKKA+M
Sbjct: 9 KKSIKRVESTKSNPWWWDSHIGLKNSKWLENNLDEMDRSVKRMVKLIEEDADSFAKKAEM 68
Query: 62 YYQRRPMLITHVENFYRMYRALAERYDNVTGELRKNIPTRLQYQGS----LAGSD----- 112
YYQ RP LI V+ F+RMYRALAERY+N+TGELRK P LQ QGS ++ SD
Sbjct: 69 YYQSRPELIALVDEFHRMYRALAERYENITGELRKGSPLELQSQGSGLSDISASDLSALW 128
Query: 113 -----SELQRSPSPSPEPQKSWTREQSPRAAGFDVFLSNKSNGSPSPASRKEPEDLASQS 167
+ L R PS RA GF+ FL N G PS K+ +D AS +
Sbjct: 129 TSNEVNRLGRPPS-------------GRRAPGFEYFLGN--GGLPSDLYHKDGDDSASIT 173
Query: 168 ESDAKSED------------GEDDGIAYTLHQRVLELEDELNTVNQKLH---DANEKLEV 212
+S+ +S+D G D +L +R+++LE EL ++L + N + +
Sbjct: 174 DSELESDDSSVTNYPGYVSIGSD---FQSLSKRIMDLEIELREAKERLRMQLEGNTESLL 230
Query: 213 LEEKSLRCHCDSKENGNGADQSA--INEKLQSSQEEINNIKNSL 254
KS D +Q +NEKLQ+S+++I +K+ L
Sbjct: 231 PRVKSETKFVDFPAKLAACEQELKDVNEKLQNSEDQIYILKSQL 274
>AT2G30500.1 | chr2:12998329-13000072 REVERSE LENGTH=518
Length = 517
Score = 169 bits (427), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 115/267 (43%), Positives = 146/267 (54%), Gaps = 60/267 (22%)
Query: 2 KPPLERNPTKKRHSWWWDSHISPKNSKWLAENLEEMDKQVKEMLQLIEEDGDSFAKKAQM 61
K +R+ TKK HSWWWDSH PKNSKWLAENLE+MD +V ML+LIEED DSFAKKAQM
Sbjct: 9 KKQFKRSMTKKSHSWWWDSHNCPKNSKWLAENLEKMDDRVNHMLKLIEEDADSFAKKAQM 68
Query: 62 YYQRRPMLITHVENFYRMYRALAERYDNVTGELRKNIPTRLQYQGSLAGSDSELQRSPSP 121
Y+Q+RP LI VE FYRMYRALAERYD +GEL+KN + +Q Q SL S SP
Sbjct: 69 YFQKRPELIQLVEEFYRMYRALAERYDQASGELQKNHTSEIQSQSSLEIS--------SP 120
Query: 122 SPEPQKSWTREQSPRAAGFDVFLSNKSNGSPSPASRKEPEDLASQS-------ESDAKSE 174
+ E +R QS S KE ED +S + S A E
Sbjct: 121 TKEK---LSRRQS---------------------SHKEEEDSSSLTDSGSDSDHSSANDE 156
Query: 175 DGEDDGIAYTLHQRVLELEDELNTVNQKL------HDANEKLEVLEEKSLRCHCDSKENG 228
DG++ L +R+ ELE EL QKL D + +++L H + G
Sbjct: 157 DGDE-----ALIRRMAELELELQETKQKLLLQQESVDGDNNVDLL-------HKITTYEG 204
Query: 229 NGADQSAINEKLQSSQEEINNIKNSLE 255
+ NEK++ ++EI N+KN L+
Sbjct: 205 ELKE---ANEKMRMHEDEIANLKNQLQ 228
>AT1G03080.1 | chr1:731794-737332 REVERSE LENGTH=1734
Length = 1733
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 72/156 (46%), Positives = 96/156 (61%), Gaps = 17/156 (10%)
Query: 8 NPTKKRHSWWWDSHISPKNSKWLAENLEEMDKQVKEMLQLIEEDGDSFAKKAQMYYQRRP 67
N KR+SWWWDSHISPKNSKWL ENL +MD +VK+M+++IEED DSFA++A+MYY++RP
Sbjct: 6 NGNSKRYSWWWDSHISPKNSKWLQENLTDMDSKVKQMIKVIEEDADSFARRAEMYYKKRP 65
Query: 68 MLITHVENFYRMYRALAERYDNVTGELRKNIPTRLQYQGSLAGSDSELQRSPSPSPEPQK 127
L+ VE FYR YRALAERYD+ TG +R Q ++A P+ +P
Sbjct: 66 ELMKLVEEFYRAYRALAERYDHATGVIR-------HAQQTMA--------EAFPNQDPM- 109
Query: 128 SWTREQSPRAAGFDVFLSNKSNGSPSPASRKEPEDL 163
E+SP + D F + P + P+DL
Sbjct: 110 -MFGEESPLGSSTDGFDPQTPDSYPPIRAPVYPDDL 144
>AT4G02710.1 | chr4:1193516-1197061 REVERSE LENGTH=1112
Length = 1111
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 106/338 (31%), Positives = 173/338 (51%), Gaps = 44/338 (13%)
Query: 7 RNPTKKRHSWWWDSHISPKNSKWLAENLEEMDKQVKEMLQLIEEDGDSFAKKAQMYYQRR 66
++ +K+ +SWWWDSH +PKNSKWL +NL +MD VK+M++++EED DSFA++A+MYY++R
Sbjct: 6 KSNSKRMYSWWWDSHNTPKNSKWLQDNLADMDSNVKQMIKVLEEDADSFARRAEMYYRKR 65
Query: 67 PMLITHVENFYRMYRALAERYDNVTGELRK-----------NIPTRL--QYQGSLAGSDS 113
P L+ VE FYR YRALAERY++ TG + K +P + G +D
Sbjct: 66 PELMKLVEEFYRAYRALAERYNHATGVIHKAHETIAEAFPNQVPLIFGDESHGGALTNDV 125
Query: 114 ELQRSPSPSPEPQKSWTREQSPRAAGFDVF----LSNKSNGSPSP---ASRKEPEDLASQ 166
+ Q P P + E A GF + + + S P ++ K + L
Sbjct: 126 DPQTPDMPPPFRARGNPDEFQQDALGFSLSHVHDVKRNIDFSEEPLFVSNGKARKGLNFN 185
Query: 167 SESDAKSEDGEDDGI------AYTLHQRVLELEDELNTVNQK------LHDAN-EKLEVL 213
D K +G D I A V+ L+D L+ + + L + N E+L L
Sbjct: 186 DHGDGKGRNGLKDHILSESERASKAEAEVVALKDSLSKMQAEKQASLALFEKNLERLSNL 245
Query: 214 EEKSLRCHCDSKENGNGADQSAINEKLQSSQEEINNIKNSLEVL-SEEHSRLLGQNKKLE 272
E + R DS+ IN++ S++ EI ++ +L L SE+ S L +K L+
Sbjct: 246 ESEVSRAQADSR---------GINDRAASAEAEIQTLRETLYKLESEKESSFLQYHKCLQ 296
Query: 273 AEIVNLKEEIASDRQQYEEKLSRSDAEIDKCRQELADA 310
+I +L++ ++ ++ E+ S+++ E ++ LA A
Sbjct: 297 -KIADLEDGLSVAHKEAGERASKAETETLALKRSLAKA 333
>AT3G22790.1 | chr3:8052446-8057888 REVERSE LENGTH=1729
Length = 1728
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 54/85 (63%), Positives = 71/85 (83%), Gaps = 1/85 (1%)
Query: 10 TKKRHSWWWDSHISPKNSKWLAENLEEMDKQVKEMLQLIEEDGDSFAKKAQMYYQRRPML 69
+++ +SWWWDSHI PKNSKW+ +NL +MD +VK M++LIEED DSFA++A+MYY++RP L
Sbjct: 9 SRRLYSWWWDSHI-PKNSKWIQQNLSDMDSKVKAMIKLIEEDADSFARRAEMYYKKRPEL 67
Query: 70 ITHVENFYRMYRALAERYDNVTGEL 94
+ VE FYR YRALAERYD+ T EL
Sbjct: 68 MKLVEEFYRAYRALAERYDHATVEL 92
>AT4G14760.1 | chr4:8475718-8481094 FORWARD LENGTH=1711
Length = 1710
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/198 (37%), Positives = 109/198 (55%), Gaps = 20/198 (10%)
Query: 3 PPLERNPTKKRHSWWWDSHISPKNSKWLAENLEEMDKQVKEMLQLIEEDGDSFAKKAQMY 62
L ++ + + +SWWWDSHI PKNSKW+ +NL +MD +VK M++LIE D DSFA++A MY
Sbjct: 2 ASLSQSESGRLYSWWWDSHI-PKNSKWIQDNLADMDSKVKTMIKLIEADADSFARRADMY 60
Query: 63 YQRRPMLITHVENFYRMYRALAERYDNVTGELRKNIPTRLQYQGSLAGSDSELQRSPSPS 122
+++RP L+ VE YR YRALAERYD+ T ELR+ ++ + D ++ S S S
Sbjct: 61 FKKRPELMKLVEELYRAYRALAERYDHTTVELRRAHKVMVEAFPNQMSFDM-IEDSASSS 119
Query: 123 PEPQKSWTREQSPRAAGFDVFLSNKSNGSPSPASRKEPEDLASQSESDAKSEDGEDDGIA 182
EP+ E + +G+ S S + L D S+ E D
Sbjct: 120 SEPRTEADTEALQK------------DGTKSKRSFSQMNKL------DGTSDSHEADSEV 161
Query: 183 YTLHQRVLELEDELNTVN 200
TL + +LEL+ E +N
Sbjct: 162 ETLKRTLLELQTEKEALN 179
>AT2G22560.1 | chr2:9585892-9588838 FORWARD LENGTH=948
Length = 947
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 70/82 (85%)
Query: 14 HSWWWDSHISPKNSKWLAENLEEMDKQVKEMLQLIEEDGDSFAKKAQMYYQRRPMLITHV 73
+SWWW SHI K SKWL +NL++++++V+ +L+L++EDGDSFAK+A+MYY++RP LI+ V
Sbjct: 10 YSWWWASHIRTKQSKWLEQNLQDIEEKVQYVLKLLQEDGDSFAKRAEMYYKKRPELISFV 69
Query: 74 ENFYRMYRALAERYDNVTGELR 95
E YR YRALAERYD+++ EL+
Sbjct: 70 EESYRAYRALAERYDHISTELQ 91
>AT5G10500.1 | chr5:3305418-3308039 FORWARD LENGTH=849
Length = 848
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 47/89 (52%), Positives = 70/89 (78%)
Query: 7 RNPTKKRHSWWWDSHISPKNSKWLAENLEEMDKQVKEMLQLIEEDGDSFAKKAQMYYQRR 66
R +SWWW SH+ K SKWL ENL++++++V+ L+L+E++GDSFAK+A+MYY+RR
Sbjct: 3 RRAASNAYSWWWASHVRTKQSKWLEENLQDIEEKVEYALKLLEDEGDSFAKRAEMYYKRR 62
Query: 67 PMLITHVENFYRMYRALAERYDNVTGELR 95
P LI+ VE ++ YRALAERYD+++ EL+
Sbjct: 63 PELISFVEESFKAYRALAERYDHISKELQ 91
>AT1G09720.1 | chr1:3144438-3147303 REVERSE LENGTH=929
Length = 928
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 46/82 (56%), Positives = 66/82 (80%)
Query: 14 HSWWWDSHISPKNSKWLAENLEEMDKQVKEMLQLIEEDGDSFAKKAQMYYQRRPMLITHV 73
+SWWW SHI K SKWL NL++M+++VK L++I+ DGDSFAK+A+MYY++RP ++ V
Sbjct: 10 YSWWWASHIRTKQSKWLEHNLQDMEEKVKYTLKIIDGDGDSFAKRAEMYYRKRPEIVNFV 69
Query: 74 ENFYRMYRALAERYDNVTGELR 95
E +R YRALAERYD+++ EL+
Sbjct: 70 EEAFRSYRALAERYDHLSTELQ 91
>AT1G03470.1 | chr1:866217-867493 REVERSE LENGTH=270
Length = 269
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 55/74 (74%), Gaps = 1/74 (1%)
Query: 16 WWW-DSHISPKNSKWLAENLEEMDKQVKEMLQLIEEDGDSFAKKAQMYYQRRPMLITHVE 74
WWW +H + S WL L E+D++ KEML++I+ED DSFA +A+MYY++RP LI VE
Sbjct: 8 WWWIGNHNTTNFSPWLHSTLSELDEKTKEMLRVIDEDADSFAARAEMYYKKRPELIAMVE 67
Query: 75 NFYRMYRALAERYD 88
FYR +R+LAERYD
Sbjct: 68 EFYRSHRSLAERYD 81
>AT2G47920.1 | chr2:19616003-19616761 FORWARD LENGTH=226
Length = 225
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 72/115 (62%), Gaps = 7/115 (6%)
Query: 16 WWWDSHISPKNSKWLAENLEEMDKQVKEMLQLIEEDGDSFAKKAQMYYQRRPMLITHVEN 75
WW++SH S K+S+WL L E+D + K ML+L++ + DSFA++A+ YY++RP LI+ VE+
Sbjct: 11 WWFESHKSSKHSQWLQSTLAEIDAKTKAMLKLLDGNADSFAQRAETYYKKRPELISFVED 70
Query: 76 FYRMYRALAERYDNV-----TGELRKNIPTRLQYQGSLAGSDSELQRSPSPSPEP 125
FYR +R+LA +D++ G +P Q S+ S+S + + S +P
Sbjct: 71 FYRAHRSLAVNFDHLKSSDHYGSRSAKVPQ--QSMESVCDSNSHFEDADSEIEDP 123
>AT1G58210.1 | chr1:21553621-21558056 FORWARD LENGTH=1247
Length = 1246
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 46/55 (83%)
Query: 40 QVKEMLQLIEEDGDSFAKKAQMYYQRRPMLITHVENFYRMYRALAERYDNVTGEL 94
+V+ L++I+EDGD+FAK+A+MYY++RP ++ VE +R YRALAERYD+++ EL
Sbjct: 335 RVEYTLKIIDEDGDTFAKRAEMYYRKRPEIVNFVEEAFRSYRALAERYDHLSREL 389
>AT4G03153.1 | chr4:1394845-1395588 REVERSE LENGTH=216
Length = 215
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 51/78 (65%), Gaps = 5/78 (6%)
Query: 16 WWW--DSHISPKNSKWLAENLEEMDKQVKEMLQLIEE---DGDSFAKKAQMYYQRRPMLI 70
WWW +H + +S WL L E+D + KEML +I+E +GDS K+A++ Y+ +P LI
Sbjct: 7 WWWIGANHNTSNSSPWLNSTLSELDSKTKEMLSVIDEVEDEGDSLMKRAKINYENKPKLI 66
Query: 71 THVENFYRMYRALAERYD 88
+E YR +R+LA+++D
Sbjct: 67 ELLEELYRSHRSLAQKHD 84
>AT1G64330.1 | chr1:23872172-23873970 FORWARD LENGTH=556
Length = 555
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 51/82 (62%), Gaps = 6/82 (7%)
Query: 17 WWDSHISPKNSKWLAENLEEMDKQVKEMLQLIEEDGDSFAKKAQMYYQRRPMLITHVENF 76
+++ H+ P N + L E+D++VK++L ++E GD ++ +R ++ V++F
Sbjct: 13 FFEPHLHPDNGESLKGTKTEIDEKVKKILGIVE-SGDIEEDES-----KRLVVAELVKDF 66
Query: 77 YRMYRALAERYDNVTGELRKNI 98
Y+ Y +L +YD++TGE+RK +
Sbjct: 67 YKEYESLYHQYDDLTGEIRKKV 88
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.306 0.124 0.336
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 9,074,119
Number of extensions: 409240
Number of successful extensions: 3486
Number of sequences better than 1.0e-05: 51
Number of HSP's gapped: 3436
Number of HSP's successfully gapped: 74
Length of query: 432
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 331
Effective length of database: 8,337,553
Effective search space: 2759730043
Effective search space used: 2759730043
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 113 (48.1 bits)