BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0158700 Os01g0158700|Os01g0158700
(749 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G24255.1 | chr3:8789471-8793208 FORWARD LENGTH=747 120 4e-27
AT4G29090.1 | chr4:14333528-14335255 FORWARD LENGTH=576 86 8e-17
AT3G09510.1 | chr3:2921804-2923258 FORWARD LENGTH=485 72 9e-13
AT1G43760.1 | chr1:16528880-16531065 REVERSE LENGTH=627 64 2e-10
AT2G02650.1 | chr2:735411-736546 FORWARD LENGTH=366 53 7e-07
AT3G25270.1 | chr3:9203934-9204965 REVERSE LENGTH=344 52 1e-06
AT4G04650.1 | chr4:2353989-2355213 REVERSE LENGTH=333 50 6e-06
>AT3G24255.1 | chr3:8789471-8793208 FORWARD LENGTH=747
Length = 746
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 98/365 (26%), Positives = 155/365 (42%), Gaps = 43/365 (11%)
Query: 295 DNMDLASITRIFPAGLTNFPMKYLGLPLVVGRLKKVHIQPLIDKCRSRLAPWQGRLMSTA 354
DN D A I FP P++YLGLPL+ ++ PL++K R R+ W R +S A
Sbjct: 6 DN-DKADILHSFPFASGALPVRYLGLPLLTKKMTTSDYGPLVEKIRVRIGKWTARHLSFA 64
Query: 355 ARVCLTKLVLTAQPIYHLTSLKLPDGTLEDIDKIRRKFLWAGGETISGGKCKVNWKRVCR 414
R+ L V+ + + +++ +LP +++ID I FLW+G E ++ K KV W VC
Sbjct: 65 GRLQLISSVIHSLTNFWMSAFRLPSACIKEIDSICSSFLWSGPE-LNTKKAKVAWSDVCT 123
Query: 415 PKDLGGLGVMDLQR--------FAAALRL-RWLWNEWAAPDKPWVGMSVPCNQQDKELFS 465
PKD GGLG+ L+ + L W+W + + + L S
Sbjct: 124 PKDEGGLGIRSLKEANKGSFWSISGNTTLGSWMWKKIL---------------KHRALAS 168
Query: 466 AATTITIGNGKTARFWDSKWLENQTPRKIAPNIFLASKRKSRSVHDAIQDNNWIRDIDVH 525
I NG FW W KI I + R + I + + + V+
Sbjct: 169 GFVKHDIHNGSNTSFWFDNW------SKIGRLIDVTGHRG--CIDMGITLHASVAEAVVN 220
Query: 526 HITDADHLRQYVHLWSMIR--RMDPLSEEQDTIRWNLTTNGQ-----YSTRSAYRLQFMG 578
H + + +I R L+ +DT+RW NG ++T+ +
Sbjct: 221 HRPRRHRHDTLLRIEDVIAEVRHQGLTSGEDTVRWK--GNGDIFKPCFNTKETWAATREP 278
Query: 579 ATRSIFYQSIWKAWAPPKCKFFSWLATQNRLWTADRLGKRGWRNQKVCPLCRTIDESVLH 638
+ +Y+ +W + A PK +W+A +NRL T DR+ C LC + E+ H
Sbjct: 279 KLKVNWYKGVWFSHATPKYSVLAWIAIKNRLTTGDRMLSWNAGADSSCVLCHHLVETRDH 338
Query: 639 LLAKC 643
L C
Sbjct: 339 LFFTC 343
>AT4G29090.1 | chr4:14333528-14335255 FORWARD LENGTH=576
Length = 575
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 87/410 (21%), Positives = 152/410 (37%), Gaps = 58/410 (14%)
Query: 366 AQPIYHLTSLKLPDGTLEDIDKIRRKFLWAGGETISGGKCKVNWKRVCRPKDLGGLGVMD 425
A P Y + LP + I + F W + G K W + K GG+G D
Sbjct: 2 ALPTYTMACFLLPKTVCKQIISVLADFWWRNKQEAKGMHWKA-WDHLSCYKAEGGIGFKD 60
Query: 426 LQRFAAALRLRWLWNEWAAPDK--------PWVGMSVPCN--------------QQDKEL 463
++ F AL + +W + P+ + S P N +E+
Sbjct: 61 IEAFNLALLGKQMWRMLSRPESLMAKVFKSRYFHKSDPLNAPLGSRPSFVWKSIHASQEI 120
Query: 464 FSAATTITIGNGKTARFWDSKWLENQTP------RKIAPNIFLASKRKSRSVHDAIQDN- 516
+GNG+ W KWL+++ +++ P + AS V D I ++
Sbjct: 121 LRQGARAVVGNGEDIIIWRHKWLDSKPASAALRMQRVPPQEY-ASVSSILKVSDLIDESG 179
Query: 517 -NWIRDIDVHHITDADHLRQYVHLWSMIRRMDPLSEE-QDTIRWNLTTNGQYSTRSAYRL 574
W +D+ + + +I + P D+ W+ T++G Y+ +S Y +
Sbjct: 180 REWRKDVIEMLFPEVER--------KLIGELRPGGRRILDSYTWDYTSSGDYTVKSGYWV 231
Query: 575 ------------QFMGATRSIFYQSIWKAWAPPKCKFFSWLATQNRLWTADRLGKRGWRN 622
+ + + YQ IWK+ PK + F W N L A L R
Sbjct: 232 LTQIINKRSSPQEVSEPSLNPIYQKIWKSQTSPKIQHFLWKCLSNSLPVAGALAYRHLSK 291
Query: 623 QKVCPLCRTIDESVLHLLAKCRVTKRIWAEIQRWTHTDLQM-DKWNDCPSIEHWWNLVVK 681
+ C C + E+V HLL KC + WA + + + +W D + +W +
Sbjct: 292 ESACIRCPSCKETVNHLLFKCTFARLTWAI----SSIPIPLGGEWADSIYVNLYWVFNLG 347
Query: 682 SPNTPRAPLRTLLMLVTWEIWGERNARIFRSTASTPASILAKIKEEGRAW 731
+ N L+ + W +W RN +FR +L + +++ W
Sbjct: 348 NGNPQWEKASQLVPWLLWRLWKNRNELVFRGREFNAQEVLRRAEDDLEEW 397
>AT3G09510.1 | chr3:2921804-2923258 FORWARD LENGTH=485
Length = 484
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 109/287 (37%), Gaps = 29/287 (10%)
Query: 463 LFSAATTITIGNGKTARFWDSKWLENQTPRKIAPNIFLASKRKSRSVHDAIQDNNWIRDI 522
L T IG+G+ R +++ PR + + + + NN
Sbjct: 33 LLKKGTRHLIGDGQNIRIGLDNIVDSHPPRPL----------NTEETYKEMTINNLFERK 82
Query: 523 DVHHITDADHLRQYVHL--WSMIRRMD-PLSEEQDTIRWNLTTNGQYSTRSAYRLQFMGA 579
++ D + Q+V I R+ S++ D I WN T G+Y+ RS Y L
Sbjct: 83 GSYYFWDDSKISQFVDQSDHGFIHRIYLAKSKKPDKIIWNYNTTGEYTVRSGYWLLTHDP 142
Query: 580 TRSI-----------FYQSIWKAWAPPKCKFFSWLATQNRLWTADRLGKRGWRNQKVCPL 628
+ +I IW PK K F W A L T +RL RG R CP
Sbjct: 143 STNIPAINPPHGSIDLKTRIWNLPIMPKLKHFLWRALSQALATTERLTTRGMRIDPSCPR 202
Query: 629 CRTIDESVLHLLAKCRVTKRIWAEIQRWTHTDLQMDKWNDCPSIEHWWNLVVKSPNTPRA 688
C +ES+ H L C W R + + L ++ E+ N++ +T +
Sbjct: 203 CHRENESINHALFTCPFATMAW----RLSDSSLIRNQLMSNDFEENISNILNFVQDTTMS 258
Query: 689 PLRTLLML-VTWEIWGERNARIFRSTASTPASILAKIKEEGRAWVKA 734
LL + + W IW RN +F +P+ + K E W+ A
Sbjct: 259 DFHKLLPVWLIWRIWKARNNVVFNKFRESPSKTVLSAKAETHDWLNA 305
>AT1G43760.1 | chr1:16528880-16531065 REVERSE LENGTH=627
Length = 626
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 71/143 (49%), Gaps = 21/143 (14%)
Query: 97 KQASRVTYLKEGDANTKFFHIKMNARRRKIFIQRLRTGNTWKFKHEEKAVIIKEHFEAFL 156
+Q SR+ +L++GDANT+FFH + A + K I+ LR + + E +KE A+
Sbjct: 436 RQKSRIKWLQDGDANTRFFHKVILANQAKNLIKFLRMDDDVRV---ENVTQVKEMIVAYY 492
Query: 157 ARPAPRLVDYDWDALQLPS---------FDC-----TTISGPITEEEVFAALKQLPGDKA 202
L+ D D L S F C + +S +++E+ AA+ +P +KA
Sbjct: 493 TH----LLGSDSDILTPDSVQRIKDIHPFRCNDTLASRLSALPSDKEITAAVFAMPRNKA 548
Query: 203 PGPDGFTGAFYKACWGTIKEDIM 225
PGPD FT F+ W +K+ +
Sbjct: 549 PGPDSFTAEFFWESWFVVKDSTI 571
>AT2G02650.1 | chr2:735411-736546 FORWARD LENGTH=366
Length = 365
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 62/152 (40%), Gaps = 7/152 (4%)
Query: 586 QSIWKAWAPPKCKFFSWLATQNRLWTADRLGKRGWRNQKVCPLCRTIDESVLHLLAKCRV 645
Q+IWK PK K F W L T RL R +C C +E++ H++ C
Sbjct: 35 QAIWKLHVAPKIKHFLWRCVTGALATNTRLRSRNIDADPICQRCCIEEETIHHIMFNCPY 94
Query: 646 TKRIWAEIQRWTHTDLQMDKWNDCPSIEHWWNLVVK--SPNTPRAPLRTLLMLVTWEIWG 703
T+ +W + + ++W S E N +++ T + R L + W +W
Sbjct: 95 TQSVWR-----SANIIIGNQWGPPSSFEDNLNRLIQLSKTQTTNSLDRFLPFWIMWRLWK 149
Query: 704 ERNARIFRSTASTPASILAKIKEEGRAWVKAG 735
RN +F+ +P K ++ W+ A
Sbjct: 150 SRNVFLFQQKCQSPDYEARKGIQDATEWLNAN 181
>AT3G25270.1 | chr3:9203934-9204965 REVERSE LENGTH=344
Length = 343
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 62/145 (42%), Gaps = 6/145 (4%)
Query: 588 IWKAWAPPKCKFFSWLATQNRLWTADRLGKRGWRNQKVCPLCRTIDESVLHLLAKCRVTK 647
IWK PK K F W L T D L +R RN C C DE+ HL C +
Sbjct: 18 IWKLKTAPKIKHFLWKLLSGALATGDNLKRRHIRNHPQCHRCCQEDETSQHLFFDCFYAQ 77
Query: 648 RIWAEIQRWTHTDLQMDKWNDCPSIEHWWNLVVKSPNTPRAP-LRTLLMLVTWEIWGERN 706
++W H +L+ ++E L++ S R P L L + + W +W RN
Sbjct: 78 QVW-RASGIPHQELR----TTGITMETKMELLLSSCLANRQPQLFNLAIWILWRLWKSRN 132
Query: 707 ARIFRSTASTPASILAKIKEEGRAW 731
+F+ + + + L + + + + W
Sbjct: 133 QLVFQQKSISWQNTLQRARNDVQEW 157
>AT4G04650.1 | chr4:2353989-2355213 REVERSE LENGTH=333
Length = 332
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 105/277 (37%), Gaps = 40/277 (14%)
Query: 472 IGNGKTARFWDSKWLENQTPRKIAPNIFLASKRKSRSV--------HDAIQDNNWIRDID 523
+G+G TA+FW W+ + P I + R+V DA++ +W
Sbjct: 16 VGSGVTAKFWHDNWI------GLGPLIEVIGPLGPRTVGLPIDAVVRDALRGTSWWIA-- 67
Query: 524 VHHITDADHLRQYVHLWSMIRRMDPLSEEQ--DTIRWNLTTNGQYSTRSAYRLQFMGATR 581
+ V L +++ L + Q D+ W + + SA R +
Sbjct: 68 ----SSRSRNPIIVQLKNLLPEAQGLLDCQHDDSFLWKTDLHAPSNRFSAPRTWSALHPQ 123
Query: 582 S---IFYQSIWKAWAPPKCKFFSWLATQNRLWTADRLGKRGWRNQKVCPLCRTIDESVLH 638
S +++++W PK F W+ NRL T DRL G C LC D+S H
Sbjct: 124 SHTVPWHKAVWFKNHVPKHAFICWVVAWNRLHTRDRLQNWGLSIPAECLLCNAHDDSRAH 183
Query: 639 LLAKCRVTKRIWAEIQRWTHTD-----LQMDKWNDCPSIEHWWNLVVKSPNTPRAPLRTL 693
L +C+ + +W T+ + + W PS E L++ R
Sbjct: 184 LFFECQFSGVVWRFFTASTNLNPPAQLMDCLNWLLSPSREKNICLII----------RLA 233
Query: 694 LMLVTWEIWGERNARIFRSTASTPASILAKIKEEGRA 730
+ IW ERN R+ + + SIL I+ RA
Sbjct: 234 FHSCVYAIWRERNQRLHSGVSRSTESILKDIQLIIRA 270
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.323 0.136 0.440
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 17,234,020
Number of extensions: 734304
Number of successful extensions: 1565
Number of sequences better than 1.0e-05: 12
Number of HSP's gapped: 1554
Number of HSP's successfully gapped: 12
Length of query: 749
Length of database: 11,106,569
Length adjustment: 106
Effective length of query: 643
Effective length of database: 8,200,473
Effective search space: 5272904139
Effective search space used: 5272904139
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 115 (48.9 bits)