BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os01g0150800 Os01g0150800|AK072612
         (225 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G10480.3  | chr5:3298047-3300048 REVERSE LENGTH=231            270   3e-73
AT5G59770.1  | chr5:24079521-24081195 REVERSE LENGTH=273           80   7e-16

>AT5G10480.3 | chr5:3298047-3300048 REVERSE LENGTH=231
          Length = 230

 Score =  270 bits (691), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 129/227 (56%), Positives = 168/227 (74%), Gaps = 9/227 (3%)

Query: 6   AGMASVLRRLYLSVYNWIVFIGWVQVSWSMILALLEKRYEAVYAAVEQHLLFAQTAAIME 65
           AG  SV+RR+YL++YNWIVF GW QV +  I  L E  YE VY A+E+ L  AQTAA++E
Sbjct: 2   AGFLSVVRRVYLTLYNWIVFAGWAQVLYLAITTLKETGYENVYDAIEKPLQLAQTAAVLE 61

Query: 66  ILHSIVGLVRSPVSSTLPQITARLFMIWGILRSFPEIHTHIFVTSLLISWCIT------- 118
           ILH +VGLVRSPVS+TLPQI +RLF+ WGIL SFPE+ +H  VTSL+ISW IT       
Sbjct: 62  ILHGLVGLVRSPVSATLPQIGSRLFLTWGILYSFPEVRSHFLVTSLVISWSITEFPITTW 121

Query: 119 --EVTRYSFNGMKESFGFTPSWLLWLRYSTFIVCFPIGMVSEVGLVYIVVPFMKASEKYC 176
             E+ RYSF G KE+ GF PSW LWLRYS+F++ +P G+ SEVGL+Y+ +P +K SE Y 
Sbjct: 122 IVEIIRYSFFGFKEALGFAPSWHLWLRYSSFLLLYPTGITSEVGLIYLALPHIKTSEMYS 181

Query: 177 LRMPNKWNFSIKYFYASVFFMALYAPVYPHLFHYLIVQRKKALAKSK 223
           +RMPN  NFS  +FYA++  +A+Y P  PH++ Y++ QRK+AL+KSK
Sbjct: 182 VRMPNILNFSFDFFYATILVLAIYVPGSPHMYRYMLGQRKRALSKSK 228



>AT5G59770.1 | chr5:24079521-24081195 REVERSE LENGTH=273
          Length = 272

 Score = 80.5 bits (197), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 47/137 (34%), Positives = 73/137 (53%), Gaps = 1/137 (0%)

Query: 39  LLEKRYEAVYAAVEQHLLFAQTAAIMEILHSIVGLVRSPVSSTLPQITARLFMIWGILRS 98
           L  K   + YA+    +   QTAAI+E+LH  +G+V S   S L Q + R   I  I+  
Sbjct: 83  LSNKTIISAYASAGFLISLFQTAAILEVLHGAIGIVPSGFLSPLMQWSGRTHFILAIVGQ 142

Query: 99  FPEIHTHIFVTSLLISWCITEVTRYSFNGMKESFGFTPSWLLWLRYSTFIVCFPIGMVSE 158
             E+    +++  L++WCI E+ RY         G  P WL +LRY+ FIV +P G+V E
Sbjct: 143 IKEVQDSPWLSITLVAWCIGEMIRYPHYAF-TCLGRCPYWLTYLRYTGFIVIYPTGLVGE 201

Query: 159 VGLVYIVVPFMKASEKY 175
           + ++Y  +P++K    Y
Sbjct: 202 LLIMYKALPYVKERNLY 218



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.330    0.139    0.446 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,684,903
Number of extensions: 176929
Number of successful extensions: 497
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 493
Number of HSP's successfully gapped: 2
Length of query: 225
Length of database: 11,106,569
Length adjustment: 95
Effective length of query: 130
Effective length of database: 8,502,049
Effective search space: 1105266370
Effective search space used: 1105266370
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 110 (47.0 bits)