BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os01g0150200 Os01g0150200|AK099465
         (221 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G10480.3  | chr5:3298047-3300048 REVERSE LENGTH=231            325   1e-89
AT5G59770.1  | chr5:24079521-24081195 REVERSE LENGTH=273           80   6e-16

>AT5G10480.3 | chr5:3298047-3300048 REVERSE LENGTH=231
          Length = 230

 Score =  325 bits (833), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 162/220 (73%), Positives = 183/220 (83%), Gaps = 9/220 (4%)

Query: 1   MTGVGSAVRRLYLSVYNWAVFFGWAQVLYYAVTTLLESGHEAVYAAVERPLQFAQTAAFL 60
           M G  S VRR+YL++YNW VF GWAQVLY A+TTL E+G+E VY A+E+PLQ AQTAA L
Sbjct: 1   MAGFLSVVRRVYLTLYNWIVFAGWAQVLYLAITTLKETGYENVYDAIEKPLQLAQTAAVL 60

Query: 61  EILHGLVGLVRSPVSATLPQIGSRLFLTWGILWSFPETHSHILVTSLVISWSIT------ 114
           EILHGLVGLVRSPVSATLPQIGSRLFLTWGIL+SFPE  SH LVTSLVISWSIT      
Sbjct: 61  EILHGLVGLVRSPVSATLPQIGSRLFLTWGILYSFPEVRSHFLVTSLVISWSITEFPITT 120

Query: 115 ---EIIRYSFFGMKETFGFAPSWLLWLRYSTFMVLYPTGISSEVGLIYIALPYMKATEKY 171
              EIIRYSFFG KE  GFAPSW LWLRYS+F++LYPTGI+SEVGLIY+ALP++K +E Y
Sbjct: 121 WIVEIIRYSFFGFKEALGFAPSWHLWLRYSSFLLLYPTGITSEVGLIYLALPHIKTSEMY 180

Query: 172 CLRMPNKWNFSFDFSYASILSLAVYVPGSPHMFTYMLAQR 211
            +RMPN  NFSFDF YA+IL LA+YVPGSPHM+ YML QR
Sbjct: 181 SVRMPNILNFSFDFFYATILVLAIYVPGSPHMYRYMLGQR 220



>AT5G59770.1 | chr5:24079521-24081195 REVERSE LENGTH=273
          Length = 272

 Score = 80.5 bits (197), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 53/152 (34%), Positives = 77/152 (50%), Gaps = 10/152 (6%)

Query: 42  AVYAAVERPLQFAQTAAFLEILHGLVGLVRSPVSATLPQIGSRLFLTWGILWSFPETHSH 101
           + YA+    +   QTAA LE+LHG +G+V S   + L Q   R      I+    E    
Sbjct: 90  SAYASAGFLISLFQTAAILEVLHGAIGIVPSGFLSPLMQWSGRTHFILAIVGQIKEVQDS 149

Query: 102 ILVTSLVISWSITEIIRYSFFGMKETFGFAPSWLLWLRYSTFMVLYPTGISSEVGLIYIA 161
             ++  +++W I E+IRY  +      G  P WL +LRY+ F+V+YPTG+  E+ ++Y A
Sbjct: 150 PWLSITLVAWCIGEMIRYPHYAF-TCLGRCPYWLTYLRYTGFIVIYPTGLVGELLIMYKA 208

Query: 162 LPYMKATEKYCLRMPNKWNF--SFDFSYASIL 191
           LPY+K    Y        NF   F FSY   L
Sbjct: 209 LPYVKERNLYA-------NFFSVFPFSYYDFL 233



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.327    0.138    0.445 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,516,151
Number of extensions: 175123
Number of successful extensions: 454
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 452
Number of HSP's successfully gapped: 2
Length of query: 221
Length of database: 11,106,569
Length adjustment: 95
Effective length of query: 126
Effective length of database: 8,502,049
Effective search space: 1071258174
Effective search space used: 1071258174
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 110 (47.0 bits)