BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os01g0141700 Os01g0141700|AB082381
         (584 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G58760.1  | chr5:23730741-23733606 REVERSE LENGTH=558          637   0.0  
AT1G80710.1  | chr1:30333499-30335796 REVERSE LENGTH=517           70   3e-12

>AT5G58760.1 | chr5:23730741-23733606 REVERSE LENGTH=558
          Length = 557

 Score =  637 bits (1644), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 291/450 (64%), Positives = 360/450 (80%), Gaps = 3/450 (0%)

Query: 88  KASITISL-KKVCKVCKSTGHEAGFKGAVYIDCPRKPCFLCKMPGGHTTLTCPHRVAMEH 146
           KA IT+ L KKVCKVCK  GHEAGFKGA YIDCP KPCFLCKMPG HTT++CPHRV  +H
Sbjct: 65  KAPITVKLIKKVCKVCKQPGHEAGFKGATYIDCPMKPCFLCKMPG-HTTMSCPHRVVTDH 123

Query: 147 GVIPASRRNTNTSLDYVFQSQVKGKIPMVKPQFLIPNQLECGNIKFHQRRVTCLEFHPTK 206
           G++P S RNT   +D+VF+ Q++ +IP +KP+++IP+Q+ C  I++H RRVTCLEFHPTK
Sbjct: 124 GILPTSHRNTKNPIDFVFKRQLQPRIPPIKPKYVIPDQVHCAVIRYHSRRVTCLEFHPTK 183

Query: 207 NNVLLSGDKKGLLGVWDYVKLHEKITYDSVHSCILNSMKFDTTNDGLLYTASSDGTISST 266
           NN+LLSGDKKG +GVWD+ K++EK  Y ++HS  +N+M+F  TND ++Y+ASSDGTI  T
Sbjct: 184 NNILLSGDKKGQIGVWDFGKVYEKNVYGNIHSVQVNNMRFSPTNDDMVYSASSDGTIGYT 243

Query: 267 DLDTGIXXXXXXXXXXXXXXXXTWRMIYGMDFNSDKGLLLVADSFGFLHLLDRRLKARIG 326
           DL+TG                 +W+M+YGMD NS+KG++L AD+FGFLH++D R     G
Sbjct: 244 DLETGTSSTLLNLNPDGWQGANSWKMLYGMDINSEKGVVLAADNFGFLHMIDHRTNNSTG 303

Query: 327 DPILIHKKGSKVTSLHCNPAQPEVLLSSGNDHYARIWDTRKLEPNSAFVSLAHGRVVNSG 386
           +PILIHK+GSKV  L CNP QPE+LLS GNDH+ARIWD RKL+P ++   LAH RVVNS 
Sbjct: 304 EPILIHKQGSKVCGLDCNPVQPELLLSCGNDHFARIWDMRKLQPKASLHDLAHKRVVNSA 363

Query: 387 YFSPQSGNKILTTCQDNRIRVWDYIFGNLESPSREIVHSHDFNRHLTPFKAEWDPKDHTE 446
           YFSP SG KILTTCQDNRIR+WD IFGNL+ PSREIVHS+DFNRHLTPFKAEWDPKD +E
Sbjct: 364 YFSPSSGTKILTTCQDNRIRIWDSIFGNLDLPSREIVHSNDFNRHLTPFKAEWDPKDTSE 423

Query: 447 TVAVIGRYISENYNGIALHPIDFIDTSTGKLLAEVMDPDITTISPVNKLHPRDDILASGS 506
           ++ VIGRYISENYNG ALHPIDFID S G+L+AEVMDP+ITTI+PVNKLHPRDD+LASGS
Sbjct: 424 SLIVIGRYISENYNGTALHPIDFIDASNGQLVAEVMDPNITTITPVNKLHPRDDVLASGS 483

Query: 507 SRSIFIWKPKTESDATEERNREKAKEFVYG 536
           SRS+FIW+P+  ++  EE+ ++K     YG
Sbjct: 484 SRSLFIWRPQDNTEMVEEK-KDKKIIICYG 512



>AT1G80710.1 | chr1:30333499-30335796 REVERSE LENGTH=517
          Length = 516

 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 82/341 (24%), Positives = 149/341 (43%), Gaps = 60/341 (17%)

Query: 196 RVTCLEFHPTKN-NVLLSGDKKGLLGVWDYVKLHEK----ITYDSVHSCILNSMKFDTTN 250
           R+  ++F P +N  ++ +GDK G +G W+    +E+    I   + HS  ++S+ F   +
Sbjct: 216 RIFVVQFLPCENVKMVAAGDKLGNVGFWNLDCGNEEDNDGIYLFTPHSAPVSSIVFQQNS 275

Query: 251 DGLLYTASSDGTISSTDLDTGIXXXXXXXXXXXXXXXXTWRMIYGMD---FN-----SDK 302
              + ++S DG I   D++  +                 + ++Y  D   F+     +D+
Sbjct: 276 LSRVISSSYDGLIRLMDVEKSV-----------------FDLVYSTDEAIFSLSQRPNDE 318

Query: 303 GLLLVADSFGFLHLLDRRLKARIGDPIL---IHKKGSKVTSLHCNPAQPEVLLSSGNDHY 359
             L     +G  ++ D     R G  +    +H++  ++ S+  NP  P V+ +S  D  
Sbjct: 319 QSLYFGQDYGVFNVWD----LRAGKSVFHWELHER--RINSIDFNPQNPHVMATSSTDGT 372

Query: 360 ARIWDTRKL--EPNSAFVSLAHGRVVNSGYFSPQSGNKILTTCQDNRIRVWDYIFGNLES 417
           A +WD R +  +      ++ H R V+S YFSP SG  + TT  DN I V      N E+
Sbjct: 373 ACLWDLRSMGAKKPKTLSTVNHSRAVHSAYFSP-SGLSLATTSLDNYIGVLS--GANFEN 429

Query: 418 PSREIVHSHDFNRHLTPFKAEWDPKDHTETVAVIGRYISENYNGIALHPIDFIDTSTGKL 477
               +++ ++ +R ++ FKA W   D          YI   Y G     ID I+    + 
Sbjct: 430 TC--MIYHNNTSRWISKFKAVWGWDDS---------YI---YVGNLSKKIDVINPKLKRT 475

Query: 478 LAEVMDPDITTISPVNKLHPRDDILASGSSR--SIFIWKPK 516
           + E+ +P    I      HP +    +GS+    +++W  K
Sbjct: 476 VMELHNPLQRAIPCRIHCHPYNVGTLAGSTAGGQVYVWTTK 516



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.318    0.135    0.412 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 11,746,884
Number of extensions: 491659
Number of successful extensions: 1565
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 1574
Number of HSP's successfully gapped: 3
Length of query: 584
Length of database: 11,106,569
Length adjustment: 104
Effective length of query: 480
Effective length of database: 8,255,305
Effective search space: 3962546400
Effective search space used: 3962546400
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 114 (48.5 bits)