BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0139200 Os01g0139200|AK065080
(671 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G01190.1 | chr2:115023-117296 FORWARD LENGTH=721 212 6e-55
AT3G18230.1 | chr3:6251495-6253971 FORWARD LENGTH=667 147 2e-35
AT4G05150.1 | chr4:2660339-2662675 FORWARD LENGTH=478 130 3e-30
AT5G09620.1 | chr5:2983757-2985352 REVERSE LENGTH=532 107 1e-23
AT1G25300.1 | chr1:8871568-8872386 FORWARD LENGTH=273 105 6e-23
AT5G64430.1 | chr5:25762540-25764081 REVERSE LENGTH=514 102 5e-22
AT3G24715.1 | chr3:9025849-9029948 FORWARD LENGTH=1118 99 7e-21
AT3G46920.1 | chr3:17280430-17284857 REVERSE LENGTH=1172 97 3e-20
AT1G04700.1 | chr1:1316919-1320653 FORWARD LENGTH=1043 96 6e-20
AT2G35050.1 | chr2:14769708-14774796 FORWARD LENGTH=1258 94 2e-19
AT5G49920.1 | chr5:20306637-20307583 REVERSE LENGTH=289 94 2e-19
AT1G79570.1 | chr1:29932856-29937540 REVERSE LENGTH=1249 93 4e-19
AT5G57610.1 | chr5:23325307-23329099 FORWARD LENGTH=1055 92 6e-19
AT1G16270.1 | chr1:5563890-5568145 FORWARD LENGTH=1148 91 3e-18
AT5G16220.1 | chr5:5298604-5300579 REVERSE LENGTH=477 87 3e-17
AT1G70640.1 | chr1:26636255-26636887 FORWARD LENGTH=175 81 2e-15
AT3G48240.1 | chr3:17867381-17868007 FORWARD LENGTH=181 79 1e-14
AT5G63130.1 | chr5:25323190-25323857 FORWARD LENGTH=193 67 4e-11
>AT2G01190.1 | chr2:115023-117296 FORWARD LENGTH=721
Length = 720
Score = 212 bits (539), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 158/364 (43%), Positives = 214/364 (58%), Gaps = 27/364 (7%)
Query: 20 YPESTESSPRSRGGDSWDE-PFPSSXXXXXX-XXXXXRLRLMCSFGGRIVPRPTDKSLCY 77
YPES +SSPRSR D WD+ P PS +LR MCS+GG I+PRP DKSLCY
Sbjct: 37 YPESLDSSPRSRTTDGWDDLPAPSGGGGGGGGSAVSSKLRFMCSYGGHILPRPHDKSLCY 96
Query: 78 LGGETRIVAVERNASLADVHARLSRSLLGGQPFTLKYQLPNEDLDSLISVSTDEDLDNLV 137
+GG+TRIV V+RN+SL + ARLS +LL G+ FTLKYQLP+EDLDSLISV+TDEDLDN++
Sbjct: 97 MGGDTRIVVVDRNSSLPSLIARLSNTLLDGRSFTLKYQLPSEDLDSLISVTTDEDLDNMI 156
Query: 138 DEYDXXXXXXXXXXXXXXXXXXLFLFPAKPXXXXXXXXXXXXXXXXXXWFVDALNSAISG 197
+EYD LFLF +KP WF++ALNSA G
Sbjct: 157 EEYD---RTISASNSTKPSRLRLFLFTSKPEATQSMGQILESSAKSDDWFLNALNSA--G 211
Query: 198 SLDGIPRGISTDSASVNCLLGLEDDSSTHSRGGPPNSSPAEE---QRANQQKLXXXXXXX 254
L+ RG S +VN LLGL+D + S G N+ ++ + A QQ+
Sbjct: 212 LLN---RGFSDSDTNVNRLLGLDDALALRSNSGDNNNRDGDDGSVKSAKQQQPPPPQQQE 268
Query: 255 XXRHPHDVQSVPDSPMIDKNSSFGSTSSAPSLSNLPPIRVRPEDRPPDSRLAP---QVPV 311
+ DV +PDSPM+D +SSFGSTSS+PSL+NLPPIRV E+ P R P + +
Sbjct: 269 QQQGGQDVNCLPDSPMLDTSSSFGSTSSSPSLANLPPIRVHVEE-PGGVRTLPDQRNLGI 327
Query: 312 EDHFAQMGISDQPVQPVIGGY--MQPPPQVPIPNMAVPSISPSDAS------SRVFSDDD 363
E+ FA+ + ++ Q G+ + PP +P+ +A+P+ + A+ +RV+SDD+
Sbjct: 328 EEQFARFNVGNK-HQLHDDGFAAISSPPPMPV-TIALPAAPVTAATVSNEFQARVYSDDE 385
Query: 364 KSDH 367
+SDH
Sbjct: 386 RSDH 389
>AT3G18230.1 | chr3:6251495-6253971 FORWARD LENGTH=667
Length = 666
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 116/273 (42%), Positives = 151/273 (55%), Gaps = 22/273 (8%)
Query: 55 RLRLMCSFGGRIVPRPTDKSLCYLGGETRIVAVERNASLADVHARLSRSLLGGQPFTLKY 114
+LRLMCSFGG I+PRP DKSL Y GGETRIV V+R ASL+ + +RLS LL G+ FTLKY
Sbjct: 63 KLRLMCSFGGHIMPRPHDKSLTYSGGETRIVVVDRRASLSSLRSRLSSMLLNGRSFTLKY 122
Query: 115 QLPNEDLDSLISVSTDEDLDNLVDEYDXXXXXXXXXXXXXXXXXXLFLFPAKPXXXXXXX 174
QLP+EDLDSL++++TDEDL+N+++EYD LFLF A
Sbjct: 123 QLPSEDLDSLVTITTDEDLENMIEEYD---RAASSATATATQRLRLFLF-ANKLETAATM 178
Query: 175 XXXXXXXXXXXWFVDALNSAISGSLDGIPRGISTDSASVNCLLGLEDDSSTHSRGGPPNS 234
WFVDALN SG L PRG+S +A N L+ L++ S + +
Sbjct: 179 GSLLDGTKSDTWFVDALNQ--SGLL---PRGLSDSAAVNNTLVNLDEASGGETEIQNLET 233
Query: 235 SPAEEQRANQQKLXXXXXXXXXRHPHDVQSVPDSPMID-KNSSFGSTSSAPSLSNLPPIR 293
+ E + H + S+PDSPM++ SS GS+SS+PS SNLPPIR
Sbjct: 234 NVGGENNKRGDLVANGVISHQEMH---MSSMPDSPMMEAAGSSIGSSSSSPSTSNLPPIR 290
Query: 294 VRPEDRPPDSRLAPQVPVEDHFAQMGISDQPVQ 326
VR + D R +E+ AQM S+ Q
Sbjct: 291 VRVSE---DQR------IEEQLAQMTFSNMQTQ 314
>AT4G05150.1 | chr4:2660339-2662675 FORWARD LENGTH=478
Length = 477
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 90/268 (33%), Positives = 129/268 (48%), Gaps = 46/268 (17%)
Query: 55 RLRLMCSFGGRIVPRPTDKSLCYLGGETRIVAVERNASLADVHARLSRSLLGGQPFTLKY 114
R+R MC+FGGRI+PRP D LCY+GG+ R+VAV R+ + A + ++L++ L G ++KY
Sbjct: 58 RVRFMCTFGGRILPRPPDNQLCYVGGDNRMVAVHRHTTFASLLSKLAK-LSGKSNISVKY 116
Query: 115 QLPNEDLDSLISVSTDEDLDNLVDEYDXXXXXXXXXXXXXXXXXXLFLFPAKPXXXXXXX 174
QLPNEDLD+LISVSTDED++N++DEYD LFLF
Sbjct: 117 QLPNEDLDALISVSTDEDVENMMDEYD----RVAQNQNPRASRLRLFLFTKNVAGEEDND 172
Query: 175 XXX-------XXXXXXXXWFVDALNSAISGSLDGIPRG--------ISTDSASV-----N 214
WF+DALN S + + G + ++ +S+ +
Sbjct: 173 SRASSISSLLDSSVNREQWFLDALNLGSSAAATAVSNGGSGRVFERVRSEVSSIVSEVPD 232
Query: 215 CLLGLEDDSSTHSRGGPPNSSPAEEQRANQQKLXXXXXXXXXRHPHDVQSVPDSPMIDKN 274
L GL++ T PP+ + RA Q+ S P SP D
Sbjct: 233 YLFGLDNFDET----APPHELRDRDPRAKIQREVSTL------------SDPGSPRRDVP 276
Query: 275 SSFGSTSSAPSLSNL-----PPIRVRPE 297
S +GSTSSAP + PP+ ++PE
Sbjct: 277 SPYGSTSSAPVMRISTPELPPPVFIKPE 304
>AT5G09620.1 | chr5:2983757-2985352 REVERSE LENGTH=532
Length = 531
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 84/151 (55%), Gaps = 13/151 (8%)
Query: 20 YPESTESSPRSRGGDSWDEPFPSSXXXXXXXXXXXRLRLMCSFGGRIVPRPTDKSLCYLG 79
YP+S ESSPRSR D F + +++LMCS+GG+I PRP D L Y+
Sbjct: 9 YPDSAESSPRSR-----DVEFENPSPWEDQQQQNYKVKLMCSYGGKIQPRPHDNQLTYVN 63
Query: 80 GETRIVAVERNASLADVHARLSRSLLG---GQPFTLKYQLPNEDLDSLISVSTDEDLDNL 136
G+T+I++V+R + ++LS G G + KYQLP EDLD+LISV+ DEDL+++
Sbjct: 64 GDTKIMSVDRGIRFPALVSKLSAVCSGGGDGGEISFKYQLPGEDLDALISVTNDEDLEHM 123
Query: 137 VDEYDXXXXXXXXXXXXXXXXXXLFLFPAKP 167
+ EYD LFLFP+ P
Sbjct: 124 MHEYD-----RLLRLSTKPARMRLFLFPSSP 149
>AT1G25300.1 | chr1:8871568-8872386 FORWARD LENGTH=273
Length = 272
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 54/110 (49%), Positives = 69/110 (62%), Gaps = 10/110 (9%)
Query: 55 RLRLMCSFGGRIVPRPTDKSLCYLGGETRIVAVERNASLADVHARLSRSLLGGQPFTLKY 114
+L L+CS+GGRI+P P +KSL Y+GGETR+V V R S D LS LL G+ F+LKY
Sbjct: 10 KLHLLCSYGGRIMPLPPEKSLHYIGGETRLVIVPRGISFLDFFKLLSDKLLSGRSFSLKY 69
Query: 115 QLPNEDLDSLISVSTDEDLDNLVDEYDXXXXXXXXXXXXXXXXXXLFLFP 164
+LP+ D DSLI+VS +EDL N++ EYD LFLFP
Sbjct: 70 KLPSCDFDSLITVSDNEDLQNMIAEYD----------STRLRRIRLFLFP 109
>AT5G64430.1 | chr5:25762540-25764081 REVERSE LENGTH=514
Length = 513
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 84/150 (56%), Gaps = 9/150 (6%)
Query: 20 YPESTESSPRSRGGDSWDEPFPSSXXXXXXXXXXXRLRLMCSFGGRIVPRPTDKSLCYLG 79
YP+ST+SSPRSR + + P P +++ MCS+GG+I PRP D L Y+
Sbjct: 9 YPDSTDSSPRSREIEFDNPPPPWDDQNQNQQQHSYKVKFMCSYGGKIQPRPHDNQLTYVN 68
Query: 80 GETRIVAVERNASLADVHARLSRSLLGGQP----FTLKYQLPNEDLDSLISVSTDEDLDN 135
GET+I++V+R + ++LS GG T KYQLP EDLD+LISV+ D+DL++
Sbjct: 69 GETKILSVDRGIRFPVLASKLSTVCGGGDGGGGEVTFKYQLPGEDLDALISVTNDDDLEH 128
Query: 136 LVDEYDXXXXXXXXXXXXXXXXXXLFLFPA 165
++ EYD LFLFPA
Sbjct: 129 MMHEYD-----RLLRLSSKPARMRLFLFPA 153
>AT3G24715.1 | chr3:9025849-9029948 FORWARD LENGTH=1118
Length = 1117
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 66/87 (75%), Gaps = 2/87 (2%)
Query: 55 RLRLMCSFGGRIVPRPTDKSLCYLGGETRIVAVERNASLADVHARLSRSLLGGQPFTLKY 114
+++ +CSFGGRI+PR TD+ L Y+GGET I+++ +N S ++ + S + Q ++KY
Sbjct: 175 KVKFLCSFGGRIMPRSTDEKLKYVGGETHIISIRKNLSWEELKKKT--SAICQQLHSIKY 232
Query: 115 QLPNEDLDSLISVSTDEDLDNLVDEYD 141
QLP ++LDSLISVS+DEDL N+++EY+
Sbjct: 233 QLPGDELDSLISVSSDEDLQNMIEEYN 259
>AT3G46920.1 | chr3:17280430-17284857 REVERSE LENGTH=1172
Length = 1171
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 67/87 (77%), Gaps = 2/87 (2%)
Query: 55 RLRLMCSFGGRIVPRPTDKSLCYLGGETRIVAVERNASLADVHARLSRSLLGGQPFTLKY 114
+++ +CS+ G+I+PRP+D L Y+GG+TRIV+V++N + ++ + + G P +KY
Sbjct: 74 KVKFLCSYNGKIIPRPSDGMLRYVGGQTRIVSVKKNVRFDEFEQKMIQ--VYGHPVVVKY 131
Query: 115 QLPNEDLDSLISVSTDEDLDNLVDEYD 141
QLP+EDLD+L+SVS+ ED+DN+++E++
Sbjct: 132 QLPDEDLDALVSVSSSEDIDNMMEEFE 158
>AT1G04700.1 | chr1:1316919-1320653 FORWARD LENGTH=1043
Length = 1042
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 62/85 (72%), Gaps = 2/85 (2%)
Query: 56 LRLMCSFGGRIVPRPTDKSLCYLGGETRIVAVERNASLADVHARLSRSLLGGQPFTLKYQ 115
L+L+CSFGGRI+ RP D L Y+GGETRI+++ ++ L ++ + L P T+KYQ
Sbjct: 122 LKLLCSFGGRILQRPGDGKLRYIGGETRIISIRKHVGLNELMHKT--YALCNHPHTIKYQ 179
Query: 116 LPNEDLDSLISVSTDEDLDNLVDEY 140
LP EDLD+LISV +DEDL ++++EY
Sbjct: 180 LPGEDLDALISVCSDEDLLHMIEEY 204
>AT2G35050.1 | chr2:14769708-14774796 FORWARD LENGTH=1258
Length = 1257
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 62/85 (72%), Gaps = 2/85 (2%)
Query: 55 RLRLMCSFGGRIVPRPTDKSLCYLGGETRIVAVERNASLADVHARLSRSLLGGQPFTLKY 114
R + +CSFGG+++PRP D+ L Y+GGETRI+ + + S ++ ++ + + T+KY
Sbjct: 176 RAKFLCSFGGKVIPRPRDQKLRYVGGETRIIRISKTISFQELMHKMKE--IFPEARTIKY 233
Query: 115 QLPNEDLDSLISVSTDEDLDNLVDE 139
QLP EDLD+L+SVS+DEDL N+++E
Sbjct: 234 QLPGEDLDALVSVSSDEDLQNMMEE 258
>AT5G49920.1 | chr5:20306637-20307583 REVERSE LENGTH=289
Length = 288
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 70/113 (61%), Gaps = 12/113 (10%)
Query: 55 RLRLMCSFGGRIVPRPTDKSLCYLGGETRIVAVERNASLADVHARLSRSLLGGQPFTLKY 114
+++ MCSFGGRI+PRP+D L Y+GGETR+VAV + S +++ +L + + LKY
Sbjct: 9 KVKFMCSFGGRILPRPSDSVLKYVGGETRVVAVSPDISFSELMKKL--TAITENDIVLKY 66
Query: 115 QLPNEDLDSLISVSTDEDLDNLVDEYDXXXXXXXXXXXXXXXXXXLFLFPAKP 167
Q+ EDLD+L+SV +DED+ ++++EY+ FLFPA P
Sbjct: 67 QIIPEDLDALVSVKSDEDVKHMIEEYNRHETPKLRT----------FLFPANP 109
>AT1G79570.1 | chr1:29932856-29937540 REVERSE LENGTH=1249
Length = 1248
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 64/87 (73%), Gaps = 2/87 (2%)
Query: 55 RLRLMCSFGGRIVPRPTDKSLCYLGGETRIVAVERNASLADVHARLSRSLLGGQPFTLKY 114
+++++CSFGG+I+PRP D L Y+GGET I+++ ++ S ++ ++ Q +KY
Sbjct: 176 KVKILCSFGGKILPRPGDSKLRYVGGETHIISIRKDISWQELRQKILEIYY--QTRVVKY 233
Query: 115 QLPNEDLDSLISVSTDEDLDNLVDEYD 141
QLP EDLD+L+SVS++EDL N+++EY+
Sbjct: 234 QLPGEDLDALVSVSSEEDLQNMLEEYN 260
>AT5G57610.1 | chr5:23325307-23329099 FORWARD LENGTH=1055
Length = 1054
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 76/144 (52%), Gaps = 8/144 (5%)
Query: 55 RLRLMCSFGGRIVPRPTDKSLCYLGGETRIVAVERNASLADVHARLSRSLLGGQPFTLKY 114
R++ +CSF G I+PRP D L Y+GGETRIV+V R+ ++ +++ R L G LKY
Sbjct: 23 RVKFLCSFLGSILPRPQDGKLRYVGGETRIVSVNRDIRYEELMSKM-RELYDGAA-VLKY 80
Query: 115 QLPNEDLDSLISVSTDEDLDNLVDEYDXXXXXXXXXXXXXXXXXXLFLFPAKPXXXXXXX 174
Q P+EDLD+L+SV D+D+ N+++EYD +FLF
Sbjct: 81 QQPDEDLDALVSVVNDDDVTNMMEEYD------KLGSGDGFTRLRIFLFSTPEQDGSLHY 134
Query: 175 XXXXXXXXXXXWFVDALNSAISGS 198
+VDALN+ I G+
Sbjct: 135 VERDDQRESERRYVDALNNLIEGT 158
>AT1G16270.1 | chr1:5563890-5568145 FORWARD LENGTH=1148
Length = 1147
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 63/87 (72%), Gaps = 2/87 (2%)
Query: 55 RLRLMCSFGGRIVPRPTDKSLCYLGGETRIVAVERNASLADVHARLSRSLLGGQPFTLKY 114
+++++CSFGG+I+PRP D L Y+GGET I+++ ++ S ++ ++ + +KY
Sbjct: 164 KVKVLCSFGGKILPRPGDSKLRYVGGETHIISIRKDISWQELRQKVLEIYY--RTHVVKY 221
Query: 115 QLPNEDLDSLISVSTDEDLDNLVDEYD 141
QLP EDLD+L+SVS DEDL N+++EY+
Sbjct: 222 QLPGEDLDALVSVSCDEDLLNMMEEYN 248
>AT5G16220.1 | chr5:5298604-5300579 REVERSE LENGTH=477
Length = 476
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 68/114 (59%), Gaps = 6/114 (5%)
Query: 55 RLRLMCSFGGRIVPRPTDKSLCYLGGETRIVAVERNA--SLADVHARLSRSLLGGQPFTL 112
+LR+MC +GG IV P KS Y+GG+TRIVA+ +A S A + + L+ +L PF +
Sbjct: 30 KLRVMCRYGGSIVSPPQTKSPRYVGGDTRIVAIPSSAETSFASLVSHLTVTLKISYPFKV 89
Query: 113 KYQLPNEDLDSLISVSTDEDLDNLVDEYDXXXXXXXXXXXXXXXXXXLFLFPAK 166
KYQLP+++LDSLISV DED+ +++E+ LFLFP K
Sbjct: 90 KYQLPDQELDSLISVEADEDVQIMMEEHG----YLSSESSIPQSRIRLFLFPLK 139
>AT1G70640.1 | chr1:26636255-26636887 FORWARD LENGTH=175
Length = 174
Score = 80.9 bits (198), Expect = 2e-15, Method: Composition-based stats.
Identities = 38/86 (44%), Positives = 59/86 (68%), Gaps = 1/86 (1%)
Query: 56 LRLMCSFGGRIVPRPTDKSLCYLGGETRIVAVERNASLADVHARLSRSLLGGQPFTLKYQ 115
++ +CS+GGRI PR D L Y GG+TR+++V R S ++ +L + G +L+ Q
Sbjct: 8 VKFLCSYGGRITPRYPDGKLRYQGGDTRVLSVTRAISFTELKKKLGE-ICGIAVTSLRCQ 66
Query: 116 LPNEDLDSLISVSTDEDLDNLVDEYD 141
LP +DLD+L++V +DEDL NL++EYD
Sbjct: 67 LPTDDLDALVTVRSDEDLKNLMEEYD 92
>AT3G48240.1 | chr3:17867381-17868007 FORWARD LENGTH=181
Length = 180
Score = 78.6 bits (192), Expect = 1e-14, Method: Composition-based stats.
Identities = 41/86 (47%), Positives = 58/86 (67%), Gaps = 2/86 (2%)
Query: 56 LRLMCSFGGRIVPRPTDKSLCYLGGETRIVAVERNASLADVHARLSRSLLGGQPFTLKYQ 115
L+ +CS+GGRI+PR D L Y+GG TR+++V + S ++ +L G LK Q
Sbjct: 14 LKFLCSYGGRILPRSIDGKLRYVGGFTRVLSVHHSISFTELTMKLEE--FCGYSVELKCQ 71
Query: 116 LPNEDLDSLISVSTDEDLDNLVDEYD 141
LPN DL++LISV +DEDL N+V+EYD
Sbjct: 72 LPNGDLETLISVKSDEDLVNIVEEYD 97
>AT5G63130.1 | chr5:25323190-25323857 FORWARD LENGTH=193
Length = 192
Score = 67.0 bits (162), Expect = 4e-11, Method: Composition-based stats.
Identities = 39/86 (45%), Positives = 61/86 (70%), Gaps = 2/86 (2%)
Query: 56 LRLMCSFGGRIVPRPTDKSLCYLGGETRIVAVERNASLADVHARLSRSLLGGQPFTLKYQ 115
L+ +CS+GGRI+PR TD L Y+GG TR+++V+R+ S +++ +L G L+ Q
Sbjct: 15 LKFLCSYGGRILPRSTDGKLRYVGGHTRVLSVDRSISFSELMKKLYE--FCGYSVDLRCQ 72
Query: 116 LPNEDLDSLISVSTDEDLDNLVDEYD 141
LPN DL++LISV ++E+L +V+EYD
Sbjct: 73 LPNGDLETLISVKSEEELAEIVEEYD 98
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.314 0.131 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 12,962,756
Number of extensions: 563665
Number of successful extensions: 3153
Number of sequences better than 1.0e-05: 19
Number of HSP's gapped: 3148
Number of HSP's successfully gapped: 19
Length of query: 671
Length of database: 11,106,569
Length adjustment: 105
Effective length of query: 566
Effective length of database: 8,227,889
Effective search space: 4656985174
Effective search space used: 4656985174
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 115 (48.9 bits)