BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0130000 Os01g0130000|AK061853
(391 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G79520.2 | chr1:29912369-29914515 REVERSE LENGTH=415 477 e-135
AT1G16310.1 | chr1:5578435-5580585 FORWARD LENGTH=429 476 e-134
AT2G39450.1 | chr2:16471744-16473735 REVERSE LENGTH=395 369 e-102
AT3G58060.1 | chr3:21497778-21499676 REVERSE LENGTH=412 323 1e-88
AT2G47830.1 | chr2:19591094-19593973 REVERSE LENGTH=472 52 5e-07
>AT1G79520.2 | chr1:29912369-29914515 REVERSE LENGTH=415
Length = 414
Score = 477 bits (1228), Expect = e-135, Method: Compositional matrix adjust.
Identities = 234/357 (65%), Positives = 277/357 (77%), Gaps = 1/357 (0%)
Query: 35 RFHRKPPFFSRIFPAGSHGKHRKIAKYYKKQENLLKDFSEMETMNEIGSLDQNAPTEEEL 94
R+ R P F + + K RK+++YYK+QE LL+ F+EMET+NE G + APTEEEL
Sbjct: 59 RYLRTPSKFLFLVLVLNLQKERKVSEYYKQQEKLLEGFNEMETINETGFVS-GAPTEEEL 117
Query: 95 RQMAKGERLAXXXXXXXXXXXXXGKVLASVESLSMAVIASTXXXXXXXXXGFILWFTAHA 154
+++AK ERLA KV ASVES SMAVIAST GFILWFTA+A
Sbjct: 118 KKLAKSERLAVHISNAANLVLFVAKVYASVESRSMAVIASTLDSLLDLLSGFILWFTANA 177
Query: 155 MKKPNKYSYPIGKRRMQPVGIIVFASVMGTLGFQVLIESGRQLITNEHQVFDHRKELWMI 214
M+ PN + YPIGKRRMQPVGIIVFASVM TLG QV++ES R L++ +E WMI
Sbjct: 178 MRTPNNFRYPIGKRRMQPVGIIVFASVMATLGLQVILESTRLLVSKNGSHMSSTEEKWMI 237
Query: 215 GSMSSVAVVKFFLMLYCRSFKNEIVRAYAQDHFFDVITNSVGLVSALLAVRYKWWMDPVG 274
G M+S VVKF LMLYCRSF+NEIVRAYAQDH FDVITNSVGL +A+LAV++ WW+DP G
Sbjct: 238 GIMASATVVKFLLMLYCRSFQNEIVRAYAQDHLFDVITNSVGLATAVLAVKFYWWIDPSG 297
Query: 275 AILIAVYTITTWARTVVENVGTLIGRSAPAEYLTKLTYLIWNHHEEIRHIDTVRAYTFGT 334
AILIA+YTI+TWARTV+ENV +LIGRSAP ++L KLT+LIWNHHE+I+HIDTVRAYTFG+
Sbjct: 298 AILIALYTISTWARTVLENVHSLIGRSAPPDFLAKLTFLIWNHHEKIKHIDTVRAYTFGS 357
Query: 335 HYFVEVDIVLPGDMPLSHAHDIGESLQEKLEQLPEVERAFVHVDFEFTHRPEHKAEV 391
HYFVEVDIVLP DM L AH+IGE+LQEKLEQL EVERAFVH+DFEFTHRPEHK +V
Sbjct: 358 HYFVEVDIVLPEDMRLHEAHNIGETLQEKLEQLSEVERAFVHIDFEFTHRPEHKCKV 414
>AT1G16310.1 | chr1:5578435-5580585 FORWARD LENGTH=429
Length = 428
Score = 476 bits (1224), Expect = e-134, Method: Compositional matrix adjust.
Identities = 236/371 (63%), Positives = 281/371 (75%), Gaps = 7/371 (1%)
Query: 22 WKLRVGDDFTVPERF---HRKPPFFSRIFPAGSHGKHRKIAKYYKKQENLLKDFSEMETM 78
W+L + D F +P H FSR F K R++++YYKKQE LL+ F+EMET+
Sbjct: 61 WRLNL-DAFQLPSSTGGRHDGRTRFSRYFRTPR--KERRVSEYYKKQERLLEGFNEMETI 117
Query: 79 NEIGSLDQNAPTEEELRQMAKGERLAXXXXXXXXXXXXXGKVLASVESLSMAVIASTXXX 138
+E G PTEEE++++AK ERLA KV AS+ES SMAVIAST
Sbjct: 118 HENG-FASGVPTEEEMKKLAKSERLAVHISNATNLVLFVAKVYASMESRSMAVIASTLDS 176
Query: 139 XXXXXXGFILWFTAHAMKKPNKYSYPIGKRRMQPVGIIVFASVMGTLGFQVLIESGRQLI 198
GFILWFTA+AM+KPN++ YPIGKRRMQPVGIIVFASVM TLG QVL+ESGRQL+
Sbjct: 177 LLDLLSGFILWFTANAMRKPNQFHYPIGKRRMQPVGIIVFASVMATLGLQVLLESGRQLV 236
Query: 199 TNEHQVFDHRKELWMIGSMSSVAVVKFFLMLYCRSFKNEIVRAYAQDHFFDVITNSVGLV 258
+ +E WMIG M SV +VKF LMLYCR F+NEIVRAYAQDH FDV+TNS+GL
Sbjct: 237 AKSGIHMNSTEEKWMIGIMVSVTIVKFLLMLYCRGFQNEIVRAYAQDHLFDVVTNSIGLA 296
Query: 259 SALLAVRYKWWMDPVGAILIAVYTITTWARTVVENVGTLIGRSAPAEYLTKLTYLIWNHH 318
+A+LAV++ WW+DP GAILIA+YTI TWARTV+ENV +LIGRSAP ++L KLT+LIWNHH
Sbjct: 297 TAVLAVKFYWWIDPTGAILIALYTIATWARTVLENVHSLIGRSAPPDFLAKLTFLIWNHH 356
Query: 319 EEIRHIDTVRAYTFGTHYFVEVDIVLPGDMPLSHAHDIGESLQEKLEQLPEVERAFVHVD 378
E+I+HIDTVRAYTFG+HYFVEVDIVLP DM L AH+IGE+LQEKLEQL EVERAFVH+D
Sbjct: 357 EQIKHIDTVRAYTFGSHYFVEVDIVLPEDMRLQEAHNIGETLQEKLEQLAEVERAFVHID 416
Query: 379 FEFTHRPEHKA 389
FEFTHRPEHK
Sbjct: 417 FEFTHRPEHKC 427
>AT2G39450.1 | chr2:16471744-16473735 REVERSE LENGTH=395
Length = 394
Score = 369 bits (947), Expect = e-102, Method: Compositional matrix adjust.
Identities = 207/370 (55%), Positives = 265/370 (71%), Gaps = 10/370 (2%)
Query: 22 WKLRVGDDFTV-PERFHRKPPFFSRIFPA-GSHGKHRKIAKYYKKQENLLKDFSEMETMN 79
W+L DDF V PE +K P S++ G G +A YY++Q +L+ F+EM+ +
Sbjct: 26 WQLNF-DDFQVSPEHKEKKSP--SKLHNCLGCLGPEDNVADYYQQQVEMLEGFTEMDELA 82
Query: 80 EIGSLDQNAPTEEELRQMAKGERLAXXXXXXXXXXXXXGKVLASVESLSMAVIASTXXXX 139
E G + ++EE +AK E LA KV ASV S S+A+IAST
Sbjct: 83 ERGFVP--GMSKEEQDNLAKSETLAIRISNIANMLLFAAKVYASVTSGSLAIIASTLDSL 140
Query: 140 XXXXXGFILWFTAHAMKKPNKYSYPIGKRRMQPVGIIVFASVMGTLGFQVLIESGRQLIT 199
GFILWFTA +M+ PN Y YPIGK+RMQP+GI+VFASVM TLG Q+++ES R +++
Sbjct: 141 LDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQPLGILVFASVMATLGLQIILESLRTMLS 200
Query: 200 NEHQVFDHRKEL--WMIGSMSSVAVVKFFLMLYCRSFKNEIVRAYAQDHFFDVITNSVGL 257
+ H+ F+ KE W++G M SV +VK L+LYCRSF NEIV+AYAQDHFFDVITN +GL
Sbjct: 201 S-HKEFNLTKEQESWVVGIMLSVTLVKLLLVLYCRSFTNEIVKAYAQDHFFDVITNIIGL 259
Query: 258 VSALLAVRYKWWMDPVGAILIAVYTITTWARTVVENVGTLIGRSAPAEYLTKLTYLIWNH 317
++ +LA +W+DPVGAI++A+YTI TW+ TV+ENV +L+G+SA EYL KLTYL WNH
Sbjct: 260 IAVILANYIDYWIDPVGAIILALYTIRTWSMTVLENVNSLVGKSARPEYLQKLTYLCWNH 319
Query: 318 HEEIRHIDTVRAYTFGTHYFVEVDIVLPGDMPLSHAHDIGESLQEKLEQLPEVERAFVHV 377
H+ IRHIDTVRAYTFG+HYFVEVDIVLP DMPL AHDIGESLQEKLE L E+ERAFVH+
Sbjct: 320 HKAIRHIDTVRAYTFGSHYFVEVDIVLPADMPLQVAHDIGESLQEKLELLEEIERAFVHL 379
Query: 378 DFEFTHRPEH 387
D+E+TH+PEH
Sbjct: 380 DYEYTHKPEH 389
>AT3G58060.1 | chr3:21497778-21499676 REVERSE LENGTH=412
Length = 411
Score = 323 bits (828), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 172/333 (51%), Positives = 223/333 (66%), Gaps = 7/333 (2%)
Query: 60 KYYKKQENLLKDFSEMETMNEIGSLDQ---NAPTEEELRQMAKGERLAXXXXXXXXXXXX 116
+YY++Q LK F E+E+ + D+ + EEE R + LA
Sbjct: 71 EYYERQLATLKSFEEVESF--LARSDEYTIDEKEEEEDRAERAAQELAMQISNWANIFLL 128
Query: 117 XGKVLASVESLSMAVIASTXXXXXXXXXGFILWFTAHAMKKPNKYSYPIGKRRMQPVGII 176
K+ A+V+S S+A+ AST G ILWFT +MK N Y YPIGK R+QPVGII
Sbjct: 129 ALKIYATVKSGSIAIAASTLDSLLDLMAGGILWFTHLSMKNVNIYKYPIGKLRVQPVGII 188
Query: 177 VFASVMGTLGFQVLIESGRQLITNE-HQVFDHRKELWMIGSMSSVAVVKFFLMLYCRSFK 235
+FA+VM TLGFQVL+ + QLI+NE + +H + +W+ M S +K L +YC+S +
Sbjct: 189 IFAAVMATLGFQVLLVAAEQLISNEPSEKMNHVQLIWLYSIMLSATAIKLVLWIYCKSSR 248
Query: 236 NEIVRAYAQDHFFDVITNSVGLVSALLAVRYKWWMDPVGAILIAVYTITTWARTVVENVG 295
N IVRAYA+DH FDV+TN +GLV+A+LA + WW+DP GAIL+A+YTI W+ TV+EN
Sbjct: 249 NHIVRAYAKDHHFDVVTNVLGLVAAVLANAFYWWLDPTGAILLAIYTIVNWSGTVMENAV 308
Query: 296 TLIGRSAPAEYLTKLTYLIWNH-HEEIRHIDTVRAYTFGTHYFVEVDIVLPGDMPLSHAH 354
+LIG+SAP E L KLTYL+ + I+H+DTVRAYTFG YFVEVDI LP D+PL AH
Sbjct: 309 SLIGQSAPPEVLQKLTYLVMRQGGDNIKHVDTVRAYTFGVLYFVEVDIELPEDLPLKEAH 368
Query: 355 DIGESLQEKLEQLPEVERAFVHVDFEFTHRPEH 387
IGESLQ KLE+LPEVERAFVH+DFE H+PEH
Sbjct: 369 AIGESLQIKLEELPEVERAFVHLDFECHHKPEH 401
>AT2G47830.1 | chr2:19591094-19593973 REVERSE LENGTH=472
Length = 471
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/280 (18%), Positives = 122/280 (43%), Gaps = 17/280 (6%)
Query: 118 GKVLASVESLSMAVIASTXXXXXXXXXGFILWFTAHAMKKPNKYSYPIGKRRMQPVGIIV 177
K L S A+IA + + A P +P G + + +G +
Sbjct: 90 AKALTGYLCGSTAIIADAAHSVSDVVLSGVALVSYRAANVPKDKEHPYGHGKFETLGALG 149
Query: 178 FASVMGTLG----------FQVLIESGRQLI-TNEHQVFD-HRKELWMIGSMSSVAVVKF 225
++++ G + + + ++I + H D + L + +++S+++ +
Sbjct: 150 ISAMLLATGSGIAWHALDLLSIALSAAPEVIHSGHHHGIDMNHPILALTVTIASISIKEG 209
Query: 226 FLMLYCRSFKNE---IVRAYAQDHFFDVITNSVGLVSALLAVRYKWWMDPVGAILIAVYT 282
+ R+ + + ++ A A H D I++ V LV ++ ++DP+ ++++
Sbjct: 210 LYWITKRAGEKQGSGLMMANAWHHRSDAISSLVALVGVGGSILGVNFLDPLAGLVVSTMI 269
Query: 283 ITTWARTVVENVGTLIGRSAPAEYLTKLTYLIWNHHEEIRHIDTVRAYTFGTHYFVEVDI 342
+ +T +++ L+ + PA+ L + I E ++ +R G+ +++V I
Sbjct: 270 VNAGLKTGHQSILELVDAAIPAQQLEPIRQTILQ-VEGVKGCHRLRGRRAGSSLYLDVHI 328
Query: 343 VLPGDMPLSHAHDIGESLQEKLE-QLPEVERAFVHVDFEF 381
V+ +S AH++GE ++ ++ PEV F+H+D F
Sbjct: 329 VVDPFSSVSVAHEVGEYVRRQINLNHPEVSEVFIHIDPAF 368
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.323 0.137 0.415
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,433,375
Number of extensions: 288012
Number of successful extensions: 681
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 672
Number of HSP's successfully gapped: 5
Length of query: 391
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 290
Effective length of database: 8,337,553
Effective search space: 2417890370
Effective search space used: 2417890370
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 113 (48.1 bits)