BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0111100 Os01g0111100|AK065672
(294 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G74070.1 | chr1:27851749-27852861 REVERSE LENGTH=318 261 3e-70
AT5G35100.1 | chr5:13360459-13361377 REVERSE LENGTH=282 72 3e-13
AT3G55920.1 | chr3:20743529-20745049 REVERSE LENGTH=229 66 2e-11
AT2G29960.1 | chr2:12769183-12770528 REVERSE LENGTH=202 66 2e-11
AT5G58710.1 | chr5:23717840-23719495 FORWARD LENGTH=205 64 1e-10
AT3G62030.2 | chr3:22973004-22975139 FORWARD LENGTH=314 61 7e-10
AT3G63400.1 | chr3:23412449-23415435 FORWARD LENGTH=571 60 1e-09
AT2G15790.1 | chr2:6878144-6880743 REVERSE LENGTH=362 60 1e-09
AT3G22920.1 | chr3:8122713-8123411 REVERSE LENGTH=233 58 5e-09
AT4G34960.1 | chr4:16648865-16650646 FORWARD LENGTH=225 57 1e-08
AT5G13120.1 | chr5:4162714-4164720 REVERSE LENGTH=260 57 2e-08
AT2G38730.1 | chr2:16192579-16194038 REVERSE LENGTH=200 56 2e-08
>AT1G74070.1 | chr1:27851749-27852861 REVERSE LENGTH=318
Length = 317
Score = 261 bits (667), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 138/228 (60%), Positives = 172/228 (75%), Gaps = 13/228 (5%)
Query: 74 TAKAFLDVSIGGEPAGRITIGLFGDAAPAGASRFLSLVTG---VGYRRKEFVKIVPGYVQ 130
T KAF+DVSI GEP GRI IGL+GD PAG +RF S+V+G + YRRK+FVKI+PGYVQ
Sbjct: 91 TKKAFIDVSIDGEPIGRIIIGLYGDDVPAGTARFSSIVSGKAGITYRRKDFVKIMPGYVQ 150
Query: 131 HGGVVSYPAIPAVTERLAAEMGAVRAQCG-------GERSPHAAAGAVSIVVRDPSLPPP 183
HGG+ SY + A ER A +G+++ GE AG+V IVVRDPS PPP
Sbjct: 151 HGGIRSY-GVDA--ERATAAVGSLQNLIEEWERGKRGEICNVNKAGSVGIVVRDPSKPPP 207
Query: 184 KPKLVARGGKLEVDQEQVGVVPNGTEFVITTGDAPELDASALVVGRVVDGMDVLGKIAAV 243
K KLVAR GKL V++E + V PNGTEFVIT D+PEL+ S LV+G+V++GM V+ K+ V
Sbjct: 208 KTKLVARNGKLVVEEEVIAVGPNGTEFVITAVDSPELEDSVLVIGKVLEGMGVVEKMREV 267
Query: 244 PTVKDNTASPYFRVAKLIGDKRAVVAERGFNRPYTKILITNCGVIEQQ 291
TV+DNT+SPYFRVAK+IGDKRAVVAERGFNRPY+K+++TNCG+IE Q
Sbjct: 268 KTVRDNTSSPYFRVAKVIGDKRAVVAERGFNRPYSKVVVTNCGLIESQ 315
>AT5G35100.1 | chr5:13360459-13361377 REVERSE LENGTH=282
Length = 281
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 94/213 (44%), Gaps = 27/213 (12%)
Query: 87 PAGRITIGLFGDAAPAGASRFLSLVTG--VGYRRKEFVKIVPGYV-----QHGGVVSYPA 139
P GR+ +GL+G P S F + T Y+ KI PG Q GG
Sbjct: 75 PLGRVVLGLYGRHVPITVSTFKRMCTSSSTSYKNTPVHKIFPGQYFLAGRQGGGRRDTAE 134
Query: 140 IPAVTERLAAEMGAVRAQCGGERSPHAAAGAVSIVVRDPSLPPPKPKLVARGGKLEVDQE 199
+ L V ++ PHA AG VS+ + + + D
Sbjct: 135 VGYSLRDLPRNTDVVNSK--AFLLPHARAGVVSLCLSE---------------NDDDDDI 177
Query: 200 QVGVVPNGTEFVITTGD--APELDASALVVGRVVDGMDVLGKIAAVPTVKDNTASPYFR- 256
++ EF+ITTG +P+LD +V G V++G+DV+ I+++PT K + F
Sbjct: 178 RLDPDYRNVEFLITTGPGPSPQLDGGNIVFGTVLEGLDVVTSISSIPTYKPSENIKQFND 237
Query: 257 VAKLIGDKRAVVAERGFNRPYTKILITNCGVIE 289
A+ +GD+RA A +NRP + I+ CG ++
Sbjct: 238 FAEFLGDERAQNARSLWNRPLKTVFISGCGELK 270
>AT3G55920.1 | chr3:20743529-20745049 REVERSE LENGTH=229
Length = 228
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 76/184 (41%), Gaps = 48/184 (26%)
Query: 73 VTAKAFLDVSIGGEPAGRITIGLFGDAAPAGASRFLSLVTG----------VGYRRKEFV 122
VT K + D+ I G PAGRI IGLFG+ P A F SL TG + ++ F
Sbjct: 57 VTHKVYFDIQINGSPAGRILIGLFGNIVPKTAENFRSLCTGEKGVGNMGKPLYFKGSSFH 116
Query: 123 KIVPGYVQHGGVVS----YPAIPAVTERLAAEMGAVRAQCGGERSPHAAAGAVSIVVRDP 178
+I+PG++ GG + ++ A E ++ H G +S+ P
Sbjct: 117 RIIPGFMIQGGDFTRGDGRGGESIYGDKFADENFKLK---------HTGPGFLSMANSGP 167
Query: 179 SLPPPKPKLVARGGKLEVDQEQVGVVPNGTEFVITTGDAPELDASALVVGRVVDGMDVLG 238
NG++F ITT LD +V G+V+ GM+V+
Sbjct: 168 D-------------------------SNGSQFFITTVTTSWLDGHHVVFGKVLSGMEVVR 202
Query: 239 KIAA 242
KI A
Sbjct: 203 KIEA 206
>AT2G29960.1 | chr2:12769183-12770528 REVERSE LENGTH=202
Length = 201
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 77/184 (41%), Gaps = 48/184 (26%)
Query: 73 VTAKAFLDVSIGGEPAGRITIGLFGDAAPAGASRFLSLVTG----------VGYRRKEFV 122
VT K + DV I G+ AGR+ IGLFG A P A F +L TG + Y+ +F
Sbjct: 30 VTHKVYFDVEIDGKSAGRVVIGLFGKAVPKTAENFRALCTGEKGVGKSGKPLHYKGSKFH 89
Query: 123 KIVPGYVQHGGVVSY----PAIPAVTERLAAEMGAVRAQCGGERSPHAAAGAVSIVVRDP 178
+I+P ++ GG ++ ++ A E ++ H G +S+
Sbjct: 90 RIIPSFMIQGGDFTHGNGMGGESIYGQKFADENFKLK---------HTGPGVLSMA---- 136
Query: 179 SLPPPKPKLVARGGKLEVDQEQVGVVPNGTEFVITTGDAPELDASALVVGRVVDGMDVLG 238
G NG++F ITT LD +V G+VV GMDV+
Sbjct: 137 ---------------------NSGEDTNGSQFFITTVTTSWLDGRHVVFGKVVQGMDVVY 175
Query: 239 KIAA 242
KI A
Sbjct: 176 KIEA 179
>AT5G58710.1 | chr5:23717840-23719495 FORWARD LENGTH=205
Length = 204
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 74/184 (40%), Gaps = 48/184 (26%)
Query: 73 VTAKAFLDVSIGGEPAGRITIGLFGDAAPAGASRFLSLVTG----------VGYRRKEFV 122
+T K + DV I G+ AGRI +GLFG P F +L TG + Y+ F
Sbjct: 33 ITHKVYFDVEIDGKAAGRIVMGLFGKTVPKTVENFRALCTGEKGIGKNGKALHYKGSSFH 92
Query: 123 KIVPGYVQHGGVVSY----PAIPAVTERLAAEMGAVRAQCGGERSPHAAAGAVSIVVRDP 178
+I+P ++ GG ++ E+ A E ++ H G +S+
Sbjct: 93 RIIPSFMLQGGDFTHGNGMGGESIYGEKFADENFKLK---------HTGPGFLSMA---- 139
Query: 179 SLPPPKPKLVARGGKLEVDQEQVGVVPNGTEFVITTGDAPELDASALVVGRVVDGMDVLG 238
G NG++F ITT LD +V G+VV GMDV+
Sbjct: 140 ---------------------NAGQDTNGSQFFITTVTTSWLDGRHVVFGKVVTGMDVVY 178
Query: 239 KIAA 242
K+ A
Sbjct: 179 KVEA 182
>AT3G62030.2 | chr3:22973004-22975139 FORWARD LENGTH=314
Length = 313
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 73/180 (40%), Gaps = 41/180 (22%)
Query: 73 VTAKAFLDVSIGGEPAGRITIGLFGDAAPAGASRFLSLVTG---VGYRRKEFVKIVPGYV 129
VT K + DV IGGE AGRI +GLFG+ P F +L TG GY+ F +I+ ++
Sbjct: 146 VTNKVYFDVEIGGEVAGRIVMGLFGEVVPKTVENFRALCTGEKKYGYKGSSFHRIIKDFM 205
Query: 130 QHGGVVS----YPAIPAVTERLAAEMGAVRAQCGGERSPHAAAGAVSIVVRDPSLPPPKP 185
GG + I + E ++ H G +S+ P+
Sbjct: 206 IQGGDFTEGNGTGGISIYGAKFEDENFTLK---------HTGPGILSMANAGPN------ 250
Query: 186 KLVARGGKLEVDQEQVGVVPNGTEFVITTGDAPELDASALVVGRVVDGMDVLGKIAAVPT 245
NG++F I T LD +V G+V++GM ++ + + T
Sbjct: 251 -------------------TNGSQFFICTVKTSWLDNKHVVFGQVIEGMKLVRTLESQET 291
>AT3G63400.1 | chr3:23412449-23415435 FORWARD LENGTH=571
Length = 570
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 71/187 (37%), Gaps = 41/187 (21%)
Query: 78 FLDVSIGGEPAGRITIGLFGDAAPAGASRFLSLVTG-----------VGYRRKEFVKIVP 126
FLDVSIGG+P RI I LF D P A F +L TG + ++ F +++
Sbjct: 10 FLDVSIGGDPVQRIVIELFADVVPKTAENFRALCTGEAGVGKSTGKPLHFKGSSFHRVIK 69
Query: 127 GYVQHGGVVSYPAIPAVTERLAAEMGAVRAQCGGERSPHAAAGAVSIVVRDPSLPPPKPK 186
G++ GG S + + H AG +S+
Sbjct: 70 GFMAQGGDFSNGNGTGGESIYGGKFSDENFRLD-----HDGAGVLSMA------------ 112
Query: 187 LVARGGKLEVDQEQVGVVPNGTEFVITTGDAPELDASALVVGRVVDGMDVLGKIAAVPTV 246
G NG++F I P LD +V G+VV+GM V+ K+ V T
Sbjct: 113 -------------NCGPNTNGSQFFILFKRQPHLDGKHVVFGKVVEGMAVIKKMELVGTS 159
Query: 247 KDNTASP 253
SP
Sbjct: 160 DGKPTSP 166
>AT2G15790.1 | chr2:6878144-6880743 REVERSE LENGTH=362
Length = 361
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 72/180 (40%), Gaps = 41/180 (22%)
Query: 75 AKAFLDVSIGGEPAGRITIGLFGDAAPAGASRFLSLVTG-----------VGYRRKEFVK 123
+K F+D+SIGGE GRI I L+ D P A F L TG + Y+ F +
Sbjct: 4 SKCFMDISIGGELEGRIVIELYDDVVPKTAENFRLLCTGEKGLGPNTGVPLHYKGNRFHR 63
Query: 124 IVPGYVQHGGVVSYPAIPAVTERLAAEMGAVRAQCGGERSPHAAAGAVSIVVRDPSLPPP 183
++ G++ GG +S A G GGE + D +
Sbjct: 64 VIKGFMIQGGDIS------------ANDGT-----GGE-------SIYGLKFDDENFELK 99
Query: 184 KPKLVARGGKLEVDQEQVGVVPNGTEFVITTGDAPELDASALVVGRVVDGMDVLGKIAAV 243
R G L + G NG++F ITT LD +V GRV GM V+ I V
Sbjct: 100 HE----RKGMLSM--ANSGPNTNGSQFFITTTRTSHLDGKHVVFGRVTKGMGVVRSIEHV 153
>AT3G22920.1 | chr3:8122713-8123411 REVERSE LENGTH=233
Length = 232
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 71/176 (40%), Gaps = 48/176 (27%)
Query: 76 KAFLDVSIGGEPAGRITIGLFGDAAPAGASRFLSLVTG----------VGYRRKEFVKIV 125
K F D+++ G+PAGRI I LF D P A F L TG + Y+ F IV
Sbjct: 5 KVFFDLTVDGKPAGRIVIELFADLTPRTAENFRGLCTGERGIGKCGKPIHYKGSTFDHIV 64
Query: 126 PGYVQHGGVVSYPAIPAVTERLAAEMGAVRAQCGGERSPHAAAGAVSIVVRDPSLPPPKP 185
P + GG + + P +E L E + + G P
Sbjct: 65 PDLMWCGGDIIFENEPIHSEELDDEYFILNHEDG-------------------------P 99
Query: 186 KLVARGGKLEVDQEQVGVVPNGTEFVITTGD-APELDASALVVGRVVDGMDVLGKI 240
+++ NG++F I D ++D +V+G+VV+G+D++ I
Sbjct: 100 GIISMADS------------NGSQFQIHMKDYGLQVDGDHVVIGKVVEGLDLMRNI 143
>AT4G34960.1 | chr4:16648865-16650646 FORWARD LENGTH=225
Length = 224
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 71/173 (41%), Gaps = 40/173 (23%)
Query: 73 VTAKAFLDVSIGGEPAGRITIGLFGDAAPAGASRFLSLVTG----------VGYRRKEFV 122
+T + FLDV I G+ GRI IGL+G P F +L TG + Y+ F
Sbjct: 45 ITNRVFLDVDIDGQRLGRIVIGLYGTVVPKTVENFRALCTGEKGKTSSGKPLHYKGTPFH 104
Query: 123 KIVPGYVQHGGVVSYPAIPAVTERLAAEMGAVRAQCGGERSPHAAAGAVSIVVRDPSLPP 182
+I+ G+V GG + + G +S + G + P
Sbjct: 105 RIISGFVIQGGDIIH---------------------GDGKSSDSIYGG--------TFPD 135
Query: 183 PKPKLVARGGKLEVDQEQVGVVPNGTEFVITTGDAPELDASALVVGRVVDGMD 235
K+ + V G NG++F ITT A L+ +V+G+V+ GMD
Sbjct: 136 ENFKIQHSHAGM-VAMANTGPDSNGSQFFITTVKASWLEGEHVVLGKVIQGMD 187
>AT5G13120.1 | chr5:4162714-4164720 REVERSE LENGTH=260
Length = 259
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 90/220 (40%), Gaps = 61/220 (27%)
Query: 73 VTAKAFLDVSIG---GEPAGRITIGLFGDAAPAGASRFLSLVT---GVGYRRKEFVKIVP 126
+T K + D+S+G G+ AGRI IGL+GD P F +L T G GY+ F +++
Sbjct: 88 ITHKVYFDISVGNPVGKLAGRIVIGLYGDDVPQTVENFRALCTGEKGFGYKGSTFHRVIR 147
Query: 127 GYVQHGGVVSYPAIPAVTERLAAEMGAVRAQCGGERSPHAAAGAVSIVVRDPSLPPPKPK 186
++ GG E G G S+ R + K
Sbjct: 148 DFMIQGG--------------DFEKG-------------NGTGGKSVYGR--TFKDENFK 178
Query: 187 LVARGGKLEVDQEQVGVVPNGTEFVITTGDAPELDASALVVGRVVDGMDVLGKIAAVPTV 246
L G + + G NG++F I T LD +V G+V++GM+V+
Sbjct: 179 LSHVGPGV-LSMANAGPNTNGSQFFICTIKTSWLDGRHVVFGQVIEGMEVV--------- 228
Query: 247 KDNTASPYFRVAKLIGDKRAVVAERGFNRPYTKILITNCG 286
KLI ++ +RG +RP K++I +CG
Sbjct: 229 ------------KLIEEQE---TDRG-DRPRKKVVIADCG 252
>AT2G38730.1 | chr2:16192579-16194038 REVERSE LENGTH=200
Length = 199
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 72/190 (37%), Gaps = 57/190 (30%)
Query: 78 FLDVSIGGEPAGRITIGLFGDAAPAGASRFLSLVTG--------VGYRRKEFVKIVPGY- 128
F DVSIGG PAGRI + LF D AP A F TG +GY+ +F +++ +
Sbjct: 35 FFDVSIGGIPAGRIKMELFADIAPKTAENFRQFCTGELRKAGKPLGYKECQFHRVIKDFM 94
Query: 129 VQHG--------GVVSYPAIPAVTERLAAEMGAVRAQCGGERSPHAAAGAVSIVVRDPSL 180
VQ G G +S E A+ H G +S+ P+
Sbjct: 95 VQSGDFLKNDGSGCMSIYGHKFEDENFTAK--------------HTGPGLLSMANSGPNT 140
Query: 181 PPPKPKLVARGGKLEVDQEQVGVVPNGTEFVITTGDAPELDASALVVGRVV-DGMDVLGK 239
NG +F IT LD +V GRV+ DG+ V+ K
Sbjct: 141 -------------------------NGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVMRK 175
Query: 240 IAAVPTVKDN 249
I V +N
Sbjct: 176 IENVAIGPNN 185
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.318 0.137 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,048,804
Number of extensions: 203666
Number of successful extensions: 533
Number of sequences better than 1.0e-05: 12
Number of HSP's gapped: 528
Number of HSP's successfully gapped: 12
Length of query: 294
Length of database: 11,106,569
Length adjustment: 98
Effective length of query: 196
Effective length of database: 8,419,801
Effective search space: 1650280996
Effective search space used: 1650280996
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 111 (47.4 bits)