BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0106300 Os01g0106300|AK061325
(318 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G75290.1 | chr1:28253890-28255173 FORWARD LENGTH=319 327 5e-90
AT1G75280.1 | chr1:28252030-28253355 FORWARD LENGTH=311 322 2e-88
AT4G39230.1 | chr4:18266024-18267604 REVERSE LENGTH=309 321 4e-88
AT1G75300.1 | chr1:28255552-28256927 FORWARD LENGTH=323 300 7e-82
AT1G19540.1 | chr1:6765713-6767247 FORWARD LENGTH=311 273 8e-74
AT4G34540.1 | chr4:16500506-16501932 FORWARD LENGTH=307 243 9e-65
AT1G32100.1 | chr1:11546472-11547953 REVERSE LENGTH=318 232 2e-61
AT4G13660.1 | chr4:7946283-7948252 FORWARD LENGTH=318 224 7e-59
>AT1G75290.1 | chr1:28253890-28255173 FORWARD LENGTH=319
Length = 318
Score = 327 bits (838), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 156/310 (50%), Positives = 223/310 (71%), Gaps = 7/310 (2%)
Query: 9 TTKSRILVVGGTGYIGRHVVAASARLGHPTTALVRDLAPSDPAKAQLLHTFRDAGVTLLH 68
+ KS+ILV+GGTG+IG+ ++ AS + GH T ALVR+ + SDP K + + F+D GVTLLH
Sbjct: 3 SEKSKILVIGGTGHIGKLIIEASVKAGHSTLALVREASLSDPNKGKTVQNFKDFGVTLLH 62
Query: 69 GDLHDHASLLRAVRDADVVISAVRATQVPDQTRLIDAIKEAGGGRVRRFIPSEFGMDPGR 128
GDL+DH SL++A++ ADVVIS V + Q+ DQT++I AIKEA G V+RF+PSEFGMD +
Sbjct: 63 GDLNDHESLVKAIKQADVVISTVGSMQILDQTKIISAIKEA--GNVKRFLPSEFGMDVDK 120
Query: 129 GASAAVEPVRSMYGSKVGIRRAVEAAGIPHTYVACNYFAGFALPSIGQFMP--KAAPVDS 186
S+AVEP +S +G K+ RR +EA GIP+TY+ NYFAG+ LP++ Q P + P D
Sbjct: 121 --SSAVEPAKSAFGRKLQTRRDIEAEGIPYTYLVTNYFAGYYLPTLVQLEPGLTSPPRDK 178
Query: 187 VVILGEGHTKVVFVEEGDIGTYTVLAAVDPRAENKTLHIRPPANTMSHDELVSMWEKKTG 246
V I G+G+ K V +E DI YT+ A DPR NKTL+I PP NT+S +E+V++WEKK G
Sbjct: 179 VKIFGDGNVKAVINKEEDIAAYTIKAVDDPRTLNKTLYINPPNNTLSMNEIVTLWEKKIG 238
Query: 247 KKLERVYVPEDAVLTKIKELEYPKNVLVSIAHAAYCRGEMSSPLDDPQ-DVEATQLYPEI 305
K +E++Y+ E+ + I+E P NVL+SI HA + +G+ ++ +P EA++LYP+I
Sbjct: 239 KSVEKIYMSEEQIFKSIQESPVPFNVLLSINHAVFVKGDQTNFTIEPSFGFEASELYPDI 298
Query: 306 QYTTVDEYLN 315
+YT++DEYL+
Sbjct: 299 KYTSIDEYLS 308
>AT1G75280.1 | chr1:28252030-28253355 FORWARD LENGTH=311
Length = 310
Score = 322 bits (825), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 155/309 (50%), Positives = 220/309 (71%), Gaps = 6/309 (1%)
Query: 9 TTKSRILVVGGTGYIGRHVVAASARLGHPTTALVRDLAPSDPAKAQLLHTFRDAGVTLLH 68
T KS+ILV+GGTGYIG+ +V ASA+ GH T ALVR+ SDP K + + +F+D GVT+LH
Sbjct: 3 TEKSKILVIGGTGYIGKFLVEASAKAGHSTFALVREATLSDPVKGKTVQSFKDLGVTILH 62
Query: 69 GDLHDHASLLRAVRDADVVISAVRATQVPDQTRLIDAIKEAGGGRVRRFIPSEFGMDPGR 128
GDL+DH SL++A++ DVVIS V + Q+ DQT++I AIKEAG V+RF+PSEFG+D R
Sbjct: 63 GDLNDHESLVKAIKQVDVVISTVGSMQILDQTKIISAIKEAG--NVKRFLPSEFGVDVDR 120
Query: 129 GASAAVEPVRSMYGSKVGIRRAVEAAGIPHTYVACNYFAGFALPSIGQFMP--KAAPVDS 186
++AVEP +S + K+ IRR +EA GIP+TY F G+ LP++ QF P + P D
Sbjct: 121 --TSAVEPAKSAFAGKIQIRRTIEAEGIPYTYAVTGCFGGYYLPTLVQFEPGLTSPPRDK 178
Query: 187 VVILGEGHTKVVFVEEGDIGTYTVLAAVDPRAENKTLHIRPPANTMSHDELVSMWEKKTG 246
V ILG+G+ K V +E DI YT+ A DPR NK L+I+P NT+S +E+V++WEKK G
Sbjct: 179 VTILGDGNAKAVINKEEDIAAYTIKAVDDPRTLNKILYIKPSNNTLSMNEIVTLWEKKIG 238
Query: 247 KKLERVYVPEDAVLTKIKELEYPKNVLVSIAHAAYCRGEMSSPLDDPQDVEATQLYPEIQ 306
K LE+ ++PE+ +L I+E P NV++SI HA + G+ + ++ VEA++LYP+++
Sbjct: 239 KSLEKTHLPEEQLLKSIQESPIPINVVLSINHAVFVNGDTNISIEPSFGVEASELYPDVK 298
Query: 307 YTTVDEYLN 315
YT+VDEYL+
Sbjct: 299 YTSVDEYLS 307
>AT4G39230.1 | chr4:18266024-18267604 REVERSE LENGTH=309
Length = 308
Score = 321 bits (822), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 157/308 (50%), Positives = 217/308 (70%), Gaps = 5/308 (1%)
Query: 9 TTKSRILVVGGTGYIGRHVVAASARLGHPTTALVRDLAPSDPAKAQLLHTFRDAGVTLLH 68
T+KS+IL +GGTGYIG+++V ASAR GHPT LVR+ + P+++ + F++ GV L
Sbjct: 2 TSKSKILFIGGTGYIGKYIVEASARSGHPTLVLVRNSTLTSPSRSSTIENFKNLGVQFLL 61
Query: 69 GDLHDHASLLRAVRDADVVISAVRATQVPDQTRLIDAIKEAGGGRVRRFIPSEFGMDPGR 128
GDL DH SL+ +++ ADVVIS V + + Q ++I AIKEAG V+RF PSEFG D R
Sbjct: 62 GDLDDHTSLVNSIKQADVVISTVGHSLLGHQYKIISAIKEAG--NVKRFFPSEFGNDVDR 119
Query: 129 GASAAVEPVRSMYGSKVGIRRAVEAAGIPHTYVACNYFAGFALPSIGQFMPKAAPVDSVV 188
+ VEP +S Y +K IRR +EA GIP+TYV+CN+FAG+ LP++ Q +AP D V+
Sbjct: 120 VFT--VEPAKSAYATKAKIRRTIEAEGIPYTYVSCNFFAGYFLPTLAQPGATSAPRDKVI 177
Query: 189 ILGEGHTKVVFVEEGDIGTYTVLAAVDPRAENKTLHIRPPANTMSHDELVSMWEKKTGKK 248
+LG+G+ K VF +E DIGTYT+ A DPR NK L+IRPP NT S ++LVS+WE K GK
Sbjct: 178 VLGDGNPKAVFNKEEDIGTYTINAVDDPRTLNKILYIRPPMNTYSFNDLVSLWENKIGKT 237
Query: 249 LERVYVPEDAVLTKIKELEYPKNVLVSIAHAAYCRGEMSSPLDDPQ-DVEATQLYPEIQY 307
LER+YVPE+ +L +I E P NV++S+ H + +G +S +P VEA++LYP+++Y
Sbjct: 238 LERIYVPEEQLLKQIIESSPPLNVMLSLCHCVFVKGGHTSFEIEPSFGVEASELYPDVKY 297
Query: 308 TTVDEYLN 315
TTVDE LN
Sbjct: 298 TTVDEILN 305
>AT1G75300.1 | chr1:28255552-28256927 FORWARD LENGTH=323
Length = 322
Score = 300 bits (768), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 151/327 (46%), Positives = 218/327 (66%), Gaps = 24/327 (7%)
Query: 8 TTTKSRILVVGGTGYIGRHVVAASARLGHPTTALVRDLAPSDPAKAQLLHTFRDAGVTLL 67
TT KS+ILV+GGTGY+G +V SA+ G+PT ALVR+ + SDP K++ + +F+D GVT+L
Sbjct: 2 TTEKSKILVIGGTGYMGEFIVEGSAKAGNPTFALVREASLSDPVKSKTIQSFKDLGVTIL 61
Query: 68 HGDLHDHASLLRAVRDADVVISAVRATQVPDQTRLIDAIKEAGGGRVRRFIPSEFGMDPG 127
HGDL+DH SL++A++ DVVIS + Q+ DQT++I AIKEAG V+RF+P+EFG+D
Sbjct: 62 HGDLNDHESLVKAIKQVDVVISTIGHKQIFDQTKIISAIKEAGN--VKRFLPAEFGIDVE 119
Query: 128 RGASAAVEPVRSMYGSKVGIRRAVEAAGIPHTYVACNYFAGFALPSIGQFMP-------- 179
R ++AVEP +S++ KV IRRA+EA GIP+TYV N AGF L ++ QF
Sbjct: 120 R--TSAVEPAKSLFAGKVQIRRAIEAEGIPYTYVVSNCSAGFYLRTLLQFESGLISHTRD 177
Query: 180 --------KAAPVDSVVILGEGHTKVVFVEEGDIGTYTVLAAVDPRAENKTLHIRPPANT 231
P D V ILG+G+ KVV +E D+ Y + A D R NKTL+I PP N
Sbjct: 178 KAIIFGDKNVPPRDKVTILGDGNAKVVINKEEDVAAYMIKAVDDLRTLNKTLYISPPNNI 237
Query: 232 MSHDELVSMWEKKTGKKLERVYVPEDAVLTKIKELEYPKNVLVSIAHAAYCRGEMSSPLD 291
+S +E+V++WEKK GK LE+ ++ E+ +L K ++ P +V SI HA + +G+ +S
Sbjct: 238 LSMNEMVTLWEKKIGKSLEKTHISEEQIL---KSIQVPIDVFKSINHAVFVKGDQTSFTI 294
Query: 292 DPQ-DVEATQLYPEIQYTTVDEYLNTL 317
+P EA+ LYP+++YT++DEYL+
Sbjct: 295 EPWFGEEASVLYPDVKYTSIDEYLSQF 321
>AT1G19540.1 | chr1:6765713-6767247 FORWARD LENGTH=311
Length = 310
Score = 273 bits (698), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 145/312 (46%), Positives = 204/312 (65%), Gaps = 9/312 (2%)
Query: 12 SRILVVGGTGYIGRHVVAASARLGHPTTALVRDLAPSDPAKAQLLHTFRDAGVTLLHGDL 71
S+ILV+G TG IG+ +V SA+ GH T ALVR+ + SDP KAQL+ F+D GVT+L+G L
Sbjct: 3 SKILVIGATGLIGKVLVEESAKSGHATFALVREASLSDPVKAQLVERFKDLGVTILYGSL 62
Query: 72 HDHASLLRAVRDADVVISAV--RATQVPDQTRLIDAIKEAGGGRVRRFIPSEFGMDPGRG 129
D SL++A++ DVVISAV T++ +QT +IDAIKE+G V+RF+PSEFG D R
Sbjct: 63 SDKESLVKAIKQVDVVISAVGRFQTEILNQTNIIDAIKESGN--VKRFLPSEFGNDVDR- 119
Query: 130 ASAAVEPVRSMYGSKVGIRRAVEAAGIPHTYVACNYFAGFALPSIGQ--FMPKAAPVDSV 187
+ A+EP S + +K IRRA+EAA IP+TYV FAG +P +GQ ++ P D V
Sbjct: 120 -TVAIEPTLSEFITKAQIRRAIEAAKIPYTYVVSGCFAGLFVPCLGQCHLRLRSPPRDKV 178
Query: 188 VILGEGHTKVVFVEEGDIGTYTVLAAVDPRAENKTLHIRPPANTMSHDELVSMWEKKTGK 247
I G+ K + E DI YT+ A DPR NK L+I PP +S +++V +WE+K GK
Sbjct: 179 SIYDTGNGKAIVNTEEDIVAYTLKAVDDPRTLNKILYIHPPNYIVSQNDMVGLWEEKIGK 238
Query: 248 KLERVYVPEDAVLTKIKELEYPKNVLVSIAHAAYCRGEMSSPLDDPQ-DVEATQLYPEIQ 306
LE+ YV E+ +L I+E + P + LV + H + + +S DP VEA++LYPE++
Sbjct: 239 TLEKTYVSEEELLKTIQESKPPMDFLVGLIHTILVKSDFTSFTIDPSFGVEASELYPEVK 298
Query: 307 YTTVDEYLNTLL 318
YT+VDE+LN +
Sbjct: 299 YTSVDEFLNRFI 310
>AT4G34540.1 | chr4:16500506-16501932 FORWARD LENGTH=307
Length = 306
Score = 243 bits (620), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 124/314 (39%), Positives = 187/314 (59%), Gaps = 10/314 (3%)
Query: 6 DQTTTKSRILVVGGTGYIGRHVVAASARLGHPTTALVRDLAPSDPAKAQLLHTFRDAGVT 65
++ KSR+L++G TG +G ++ S GHPT AL+R+ SD L + DAGVT
Sbjct: 2 EEEKKKSRVLIIGATGRLGNYLTRFSIESGHPTFALIRNTTLSDK-----LKSLSDAGVT 56
Query: 66 LLHGDLHDHASLLRAVRDADVVISAVRATQVPDQTRLIDAIKEAGGGRVRRFIPSEFGMD 125
LL G L D SL AV DVVISA+ + V DQ L+ IK+AG ++RFIP+E+G +
Sbjct: 57 LLKGSLEDEGSLAEAVSKVDVVISAIPSKHVLDQKLLVRVIKQAGS--IKRFIPAEYGAN 114
Query: 126 PGRGASAAVEPVRSMYGSKVGIRRAVEAAGIPHTYVACNYFAGFALPSIGQFMPKAAPVD 185
P + + ++ Y K IR +E+ GIP+TY+ C F LPS+ Q ++ P D
Sbjct: 115 PDKTQVSDLD--HDFYSKKSEIRHMIESEGIPYTYICCGLFMRVLLPSLVQPGLQSPPTD 172
Query: 186 SVVILGEGHTKVVFVEEGDIGTYTVLAAVDPRAENKTLHIRPPANTMSHDELVSMWEKKT 245
V + G+G+ K VFV + D+ +T+ DPR NKTL++ PP N S ++LV +WE K
Sbjct: 173 KVTVFGDGNVKAVFVNDVDVAAFTIKTIDDPRTLNKTLYLSPPGNICSMNDLVELWEGKI 232
Query: 246 GKKLERVYVPEDAVLTKIKELEYPKNVLVSIAHAAYCRGEMSS-PLDDPQDVEATQLYPE 304
KKLE+ + E+ +L KIKE YP N+ + ++ + +G+ + ++ V T+LYP+
Sbjct: 233 EKKLEKTFATENQLLKKIKETPYPDNMEMVFIYSVFIKGDHTYFDIESCGGVNGTELYPD 292
Query: 305 IQYTTVDEYLNTLL 318
++Y TV E+L+TLL
Sbjct: 293 VKYMTVSEFLDTLL 306
>AT1G32100.1 | chr1:11546472-11547953 REVERSE LENGTH=318
Length = 317
Score = 232 bits (592), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 128/320 (40%), Positives = 188/320 (58%), Gaps = 9/320 (2%)
Query: 4 GGDQTTTKSRILVVGGTGYIGRHVVAASARLGHPTTALVRDLAPSDPAKAQLLHTFRDAG 63
G + T K+R+LVVG TGYIG+ +V A GH T L R + K QL +F+ G
Sbjct: 2 GESKRTEKTRVLVVGATGYIGKRIVRACLAEGHETYVLQRPEIGLEIEKVQLFLSFKKLG 61
Query: 64 VTLLHGDLHDHASLLRAVRDADVVISAV-----RATQVPDQTRLIDAIKEAGGGRVRRFI 118
++ G DH SL+ AV+ DVV+SA+ R+ + Q +L++AIKEAG V+RF+
Sbjct: 62 ARIVEGSFSDHQSLVSAVKLVDVVVSAMSGVHFRSHNILVQLKLVEAIKEAGN--VKRFL 119
Query: 119 PSEFGMDPGRGASAAVEPVRSMYGSKVGIRRAVEAAGIPHTYVACNYFAGFALPSIGQFM 178
PSEFGMDP R A+ P R + K+ +R+A+EAAGIP+TYV FA + ++ Q +
Sbjct: 120 PSEFGMDPPR-MGHALPPGRETFDQKMEVRQAIEAAGIPYTYVVGACFAAYFAGNLSQMV 178
Query: 179 PKAAPVDSVVILGEGHTKVVFVEEGDIGTYTVLAAVDPRAENKTLHIRPPANTMSHDELV 238
P + V I G+G+ KVVF +E DI YT DPR NKT++IRPP N ++ ELV
Sbjct: 179 TLLPPKEKVNIYGDGNVKVVFADEDDIAKYTAKTLNDPRTLNKTVNIRPPDNVLTQLELV 238
Query: 239 SMWEKKTGKKLERVYVPEDAVLTKIKELEYPKNVLVSIAHAAYCRGEMSSPLDDPQDVEA 298
+WEK TGK+LE+ + L I+++E P + + + G ++ + +D EA
Sbjct: 239 QIWEKLTGKELEKTNIAAQDFLANIEQMEIPHQAGIGHFYHIFYEGCLTDH-EVGEDEEA 297
Query: 299 TQLYPEIQYTTVDEYLNTLL 318
+ LYP+++Y +D+YL L
Sbjct: 298 SSLYPDVKYKRMDDYLRMFL 317
>AT4G13660.1 | chr4:7946283-7948252 FORWARD LENGTH=318
Length = 317
Score = 224 bits (570), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 133/317 (41%), Positives = 184/317 (58%), Gaps = 17/317 (5%)
Query: 11 KSRILVVGGTGYIGRHVVAASARLGHPTTALVRDLAPSDPAKAQLLHTFRDAGVTLLHGD 70
K+R+LVVGGTG +GR +V+A GH T L R D K QLL +F+ G L+ G
Sbjct: 9 KTRVLVVGGTGSLGRRIVSACLAEGHETYVLQRPEIGVDIEKVQLLLSFKRLGAHLVEGS 68
Query: 71 LHDHASLLRAVRDADVVISAV-----RATQVPDQTRLIDAIKEAGGGRVRRFIPSEFGMD 125
DH SL+ AV+ DVV+SA+ R +P Q +L+ AIKEAG V+RF+PSEFGMD
Sbjct: 69 FSDHQSLVSAVKQVDVVVSAMSGVHFRTHNIPVQLKLVAAIKEAG--NVKRFLPSEFGMD 126
Query: 126 PGRGASAAVEPVRSMYGSKVGIRRAVEAAGIPHTYV--AC--NYFAGFALPSIGQFMPKA 181
P R A+ P + K+ IR A++AAGI HTY+ AC YF G L +G P
Sbjct: 127 PSR-MGHAMPPGSETFDQKMEIRNAIKAAGISHTYLVGACFAAYFGG-NLSQMGTLFP-- 182
Query: 182 APVDSVVILGEGHTKVVFVEEGDIGTYTVLAAVDPRAENKTLHIRPPANTMSHDELVSMW 241
P + V I G+G+ KVVFV+E D+ YT DPR NKT+++RP N ++ ELV +W
Sbjct: 183 -PKNKVDIYGDGNVKVVFVDEDDMAKYTAKTLNDPRTLNKTVYVRPTDNILTQMELVQIW 241
Query: 242 EKKTGKKLERVYVPEDAVLTKIKELEYPKNVLVSIAHAAYCRGEMSSPLDDPQDVEATQL 301
EK T K+LE+ YV + L I++ E + + Y G ++ + D EAT+L
Sbjct: 242 EKLTEKELEKTYVSGNDFLADIEDKEISHQAGLGHFYHIYYEGCLTDH-EVGDDEEATKL 300
Query: 302 YPEIQYTTVDEYLNTLL 318
YP+++Y +DEYL +
Sbjct: 301 YPDVKYKRMDEYLKIFV 317
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.318 0.134 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,866,390
Number of extensions: 282040
Number of successful extensions: 886
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 858
Number of HSP's successfully gapped: 8
Length of query: 318
Length of database: 11,106,569
Length adjustment: 99
Effective length of query: 219
Effective length of database: 8,392,385
Effective search space: 1837932315
Effective search space used: 1837932315
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 112 (47.8 bits)