BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0100900 Os01g0100900|AY972084
(539 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G27980.1 | chr1:9748812-9752618 FORWARD LENGTH=545 758 0.0
AT3G17760.1 | chr3:6078893-6080838 REVERSE LENGTH=495 104 1e-22
AT5G17330.1 | chr5:5711141-5714839 FORWARD LENGTH=503 99 6e-21
AT1G65960.2 | chr1:24552094-24557253 FORWARD LENGTH=495 96 5e-20
AT2G02000.1 | chr2:469505-471997 REVERSE LENGTH=501 87 2e-17
AT2G02010.1 | chr2:474375-476495 REVERSE LENGTH=494 87 3e-17
>AT1G27980.1 | chr1:9748812-9752618 FORWARD LENGTH=545
Length = 544
Score = 758 bits (1957), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/529 (68%), Positives = 426/529 (80%)
Query: 9 LRLRDAANHHLSRYEPXXXXXXXXXXXXXXXXXXXXXXXXXDRGLRTVLLALAMTAIKLL 68
++ R + N LS +EP ++GL+ L+ M +K++
Sbjct: 14 IQARGSLNSRLSEFEPLVLLLVPLVSLFLAQIIGSVFGVVHEKGLKACLIGFIMGLLKMI 73
Query: 69 PGVSAYINAEKRKVVDQLQSGGTSTKSTLRTELPTVGLSNQVINDLETLKARDVNWQGKC 128
PGV YI+AEK+KVVDQLQSG +S K LP GL +V+ +E K D WQGKC
Sbjct: 74 PGVQNYIDAEKQKVVDQLQSGSSSKKKNKTEVLPVKGLGVEVLEKMENEKRNDAIWQGKC 133
Query: 129 SGTVYIAGSESEGHFALINKAYSMFSHTNPLHQDVFKSVAQLEAEVVAMTAALLGIKEKS 188
SGTVYI G+ESEGHF+LIN+A SMF+HTNPLH DVF+SV + E+EVVAMTAALLG KE +
Sbjct: 134 SGTVYIGGAESEGHFSLINQACSMFAHTNPLHIDVFQSVVRFESEVVAMTAALLGSKETA 193
Query: 189 SGGQICGNMTSGGTESILLAVKTSRDYMRTKKGITKPEMIIAESAHSAYDKAAQYFNIKV 248
SGGQICGNMTSGGTESI+LAVK+SRDYM+ KKGIT+PEMII ES HSAYDKAAQYF IK+
Sbjct: 194 SGGQICGNMTSGGTESIVLAVKSSRDYMKYKKGITRPEMIIPESGHSAYDKAAQYFKIKL 253
Query: 249 RRVPVNKEFLADVKGFKRCINGNTIMMVGSAPGFPHGLIDPIEELGELASRYDICLHVDL 308
RVPV+K+F ADVK +R IN NTIM+VGSAPGFPHG+IDPIEELG+LA Y IC HVDL
Sbjct: 254 WRVPVDKDFRADVKATRRHINRNTIMIVGSAPGFPHGIIDPIEELGQLALSYGICFHVDL 313
Query: 309 CLGGFVLPFARKLGYPIPPFDFCVKGVTSISTDVHKYGLAPKGTSIVLYKNHEIRKHQFV 368
CLGGFVLPFARKLGY IPPFDF V+GVTSIS DVHKYGLAPKGTS VLY+NHEIRKHQFV
Sbjct: 314 CLGGFVLPFARKLGYQIPPFDFSVQGVTSISVDVHKYGLAPKGTSTVLYRNHEIRKHQFV 373
Query: 369 AVTEWTGGLYVSPTIAGSRPGGLIAGAWAAMTSLGLNGYMENTGHIMEVSKKIQRGIEDI 428
AVTEW+GGLYVSPTIAGSRPG L+AGAWAAM SLG GY++NT IME SK+++ G+ +I
Sbjct: 374 AVTEWSGGLYVSPTIAGSRPGSLVAGAWAAMMSLGEEGYLQNTSKIMEASKRLEEGVREI 433
Query: 429 PGLFVIGKPDMTVVAFGSDSVDIFEVNDIMSSKGWHLNALQRPNSLHICVTLQHTVIYEE 488
LFVIGKPDMT+VAFGS ++DIFEVNDIMSSKGWHLNALQRPNS+HIC+TLQH + ++
Sbjct: 434 HELFVIGKPDMTIVAFGSKALDIFEVNDIMSSKGWHLNALQRPNSIHICITLQHVPVVDD 493
Query: 489 FLKDLKDSVDTVKANPGPISGGRAPIYGAAGKMPDRGMVRELLVEFMDA 537
FL+DL+++V+TVKANPGPI+GG APIYGAAGKMPDRGMV ELLV FMD+
Sbjct: 494 FLRDLREAVETVKANPGPITGGLAPIYGAAGKMPDRGMVNELLVSFMDS 542
>AT3G17760.1 | chr3:6078893-6080838 REVERSE LENGTH=495
Length = 494
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/367 (26%), Positives = 168/367 (45%), Gaps = 34/367 (9%)
Query: 155 HTNPLHQDVFKSVAQLEAEVVAMTAALL----GIKEKSSGGQICGNMTSGGTESILLA-- 208
+ N + D + +L+ V M A L G E + G CG T G +E+I+LA
Sbjct: 80 NKNYVDMDEYPVTTELQNRCVNMIANLFHAPVGEDEAAIG---CG--TVGSSEAIMLAGL 134
Query: 209 -VKTSRDYMRTKKG--ITKPEMIIAESAHSAYDKAAQYFNIKVRRVPVNKEF-LADVKGF 264
K + R +G I KP ++ + ++K A+YF ++++ V +++++ + D
Sbjct: 135 AFKRKWQHRRKAQGLPIDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEDYYVMDPAKA 194
Query: 265 KRCINGNTIMMVGSAPGFPHGLIDPIEELGELASR------YDICLHVDLCLGGFVLPFA 318
++ NTI + G + +++L +L + ++ +HVD GGF+ PF
Sbjct: 195 VEMVDENTICVAAILGSTLTGEFEDVKQLNDLLAEKNAETGWETPIHVDAASGGFIAPFL 254
Query: 319 RKLGYPIPPFDFCVKGVTSISTDVHKYGLAPKGTSIVLYKNHEIRKHQFVAVTEWTGGLY 378
YP +DF + V SI+ HKYGL G V+++ + + V + G
Sbjct: 255 ----YPDLEWDFRLPWVKSINVSGHKYGLVYAGVGWVVWRTKDDLPEELVFHINYLGADQ 310
Query: 379 VSPTIAGSRPGGLIAGAWAAMTSLGLNGYMENTGHIMEVSKKIQRGIEDIPGLFVIGKPD 438
+ T+ S+ I + LG GY + M+ +++++ GIE + G F I D
Sbjct: 311 PTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMDNARRLREGIE-MTGKFNIVSKD 369
Query: 439 MTV--VAFG---SDSVDIFEVNDIMSSKGWHLNALQRP-NSLHICVTLQHTVIYEEFLKD 492
+ V VAF S +FE+ + + GW + A P ++ HI V VI E+F +
Sbjct: 370 IGVPLVAFSLKDSSKHTVFEIAESLRKFGWIIPAYTMPADAQHIAVL--RVVIREDFSRG 427
Query: 493 LKDSVDT 499
L D + T
Sbjct: 428 LADRLIT 434
>AT5G17330.1 | chr5:5711141-5714839 FORWARD LENGTH=503
Length = 502
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 90/363 (24%), Positives = 167/363 (46%), Gaps = 30/363 (8%)
Query: 155 HTNPLHQDVFKSVAQLEAEVVAMTAALLGIKEKSSGGQICGNMTSGGTESILLA-VKTSR 213
+ N + D + +L+ V M A L + + + G T G +E+I+LA + R
Sbjct: 81 NKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLEEAETAV-GVGTVGSSEAIMLAGLAFKR 139
Query: 214 DYMRTKKG----ITKPEMIIAESAHSAYDKAAQYFNIKVRRVPVNK-EFLADVKGFKRCI 268
+ +K + KP ++ + ++K A+YF ++++ V +++ ++ D + +
Sbjct: 140 KWQNKRKAEGKPVDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPQQAVDMV 199
Query: 269 NGNTIMMVGSAPGFPHGLIDPIEELGEL------ASRYDICLHVDLCLGGFVLPFARKLG 322
+ NTI + +G + ++ L +L + +D +HVD GGF+ PF
Sbjct: 200 DENTICVAAILGSTLNGEFEDVKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFL---- 255
Query: 323 YPIPPFDFCVKGVTSISTDVHKYGLAPKGTSIVLYKNHEIRKHQFVAVTEWTGGLYVSPT 382
YP +DF + V SI+ HKYGL G V+++N E + + + G + T
Sbjct: 256 YPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFT 315
Query: 383 IAGSRPGGLIAGAWAAMTSLGLNGY---MENTGHIMEVSKKIQRGIEDIPGLFVIGKPD- 438
+ S+ + + + LG GY MEN M V ++ G+E ++ K +
Sbjct: 316 LNFSKGSSQVIAQYYQLIRLGHEGYRNVMENCRENMIV---LREGLEKTERFNIVSKDEG 372
Query: 439 MTVVAFG---SDSVDIFEVNDIMSSKGWHLNALQR-PNSLHICVTLQHTVIYEEFLKDLK 494
+ +VAF S FE++D++ GW + A PN+ HI T+ VI E+F + L
Sbjct: 373 VPLVAFSLKDSSCHTEFEISDMLRRYGWIVPAYTMPPNAQHI--TVLRVVIREDFSRTLA 430
Query: 495 DSV 497
+ +
Sbjct: 431 ERL 433
>AT1G65960.2 | chr1:24552094-24557253 FORWARD LENGTH=495
Length = 494
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 94/406 (23%), Positives = 179/406 (44%), Gaps = 33/406 (8%)
Query: 155 HTNPLHQDVFKSVAQLEAEVVAMTAALLGIKEKSSGGQICGNMTSGGTESILLA-VKTSR 213
+ N + D + +L+ V + A L + S + G T G +E+I+LA + R
Sbjct: 80 NKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEESETAV-GVGTVGSSEAIMLAGLAFKR 138
Query: 214 DYMRTKKG----ITKPEMIIAESAHSAYDKAAQYFNIKVRRVPVNK-EFLADVKGFKRCI 268
+ +K KP ++ + ++K A+YF ++++ V +++ ++ D +
Sbjct: 139 KWQNKRKAEGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVNLSEGYYVMDPDKAAEMV 198
Query: 269 NGNTIMMVGSAPGFPHGLIDPIEELGELASR------YDICLHVDLCLGGFVLPFARKLG 322
+ NTI + +G + ++ L +L + ++ +HVD GGF+ PF
Sbjct: 199 DENTICVAAILGSTLNGEFEDVKRLNDLLVKKNEETGWNTPIHVDAASGGFIAPFI---- 254
Query: 323 YPIPPFDFCVKGVTSISTDVHKYGLAPKGTSIVLYKNHEIRKHQFVAVTEWTGGLYVSPT 382
YP +DF + V SI+ HKYGL G V+++ E + + + G + T
Sbjct: 255 YPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVVWRAAEDLPEELIFHINYLGADQPTFT 314
Query: 383 IAGSRPGGLIAGAWAAMTSLGLNGYMENTGHIMEVSKKIQRGIEDIPGLFVIGKPD-MTV 441
+ S+ I + + LG GY + +E ++ GIE ++ K + V
Sbjct: 315 LNFSKGSSQIIAQYYQLIRLGFEGYKNVMENCIENMVVLKEGIEKTERFNIVSKDQGVPV 374
Query: 442 VAFGSDSVDI---FEVNDIMSSKGWHLNALQRP-NSLHICVTLQHTVIYEEF-------- 489
VAF FE+++++ GW + A P ++ HI T+ VI E+F
Sbjct: 375 VAFSLKDHSFHNEFEISEMLRRFGWIVPAYTMPADAQHI--TVLRVVIREDFSRTLAERL 432
Query: 490 LKDLKDSVDTVKANPGPISGGRAPIYGAAGKMPDRGMVRELLVEFM 535
+ D+ + + P IS + I G A + ++ M +E+L+E +
Sbjct: 433 VADISKVLHELDTLPSKIS-KKMGIEGIAENVKEKKMEKEILMEVI 477
>AT2G02000.1 | chr2:469505-471997 REVERSE LENGTH=501
Length = 500
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/360 (23%), Positives = 157/360 (43%), Gaps = 24/360 (6%)
Query: 155 HTNPLHQDVFKSVAQLEAEVVAMTAALLGIKEKSSGGQICGNMTSGGTESILLA-VKTSR 213
+ N + D + L+ V M A L G G T G +E+++LA + R
Sbjct: 81 NKNNVEMDQYPVTTDLQNRCVNMIARLFN-APLGDGEAAIGVGTVGSSEAVMLAGLAFKR 139
Query: 214 DYMRTKKGI----TKPEMIIAESAHSAYDKAAQYFNIKVRRVPVNK-EFLADVKGFKRCI 268
+ +K + +P ++ + +K A+YF ++++ V + + ++ D +
Sbjct: 140 QWQNKRKALGLPYDRPNIVTGANIQVCLEKFARYFEVELKEVKLREGYYVMDPDKAVEMV 199
Query: 269 NGNTIMMVGSAPGFPHGLIDPIEELGEL------ASRYDICLHVDLCLGGFVLPFARKLG 322
+ NTI +V G + ++ L +L + +D +HVD GGF+ PF
Sbjct: 200 DENTICVVAILGSTLTGEFEDVKLLNDLLVEKNKKTGWDTPIHVDAASGGFIAPFL---- 255
Query: 323 YPIPPFDFCVKGVTSISTDVHKYGLAPKGTSIVLYKNHEIRKHQFVAVTEWTGGLYVSPT 382
YP +DF + V SI+ HKYGL G V+++ + + + G + T
Sbjct: 256 YPDLEWDFRLPLVKSINVSGHKYGLVYAGIGWVVWRTKTDLPDELIFHINYLGADQPTFT 315
Query: 383 IAGSRPGGLIAGAWAAMTSLGLNGYMENTGHIMEVSKKIQRGIEDIPGLFVIGKPD-MTV 441
+ S+ + + + LG GY + E +++G+E ++ K + + +
Sbjct: 316 LNFSKGSSQVIAQYYQLIRLGFEGYRNVMDNCRENMMVLRQGLEKTGRFNIVSKENGVPL 375
Query: 442 VAFG---SDSVDIFEVNDIMSSKGWHLNALQRP-NSLHICVTLQHTVIYEEFLKDLKDSV 497
VAF S + FEV +++ GW + A P ++ H VT+ VI E+F + L + +
Sbjct: 376 VAFSLKDSSRHNEFEVAEMLRRFGWIVPAYTMPADAQH--VTVLRVVIREDFSRTLAERL 433
>AT2G02010.1 | chr2:474375-476495 REVERSE LENGTH=494
Length = 493
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/361 (23%), Positives = 158/361 (43%), Gaps = 26/361 (7%)
Query: 155 HTNPLHQDVFKSVAQLEAEVVAMTAALLGIKEKSSGGQICGNMTSGGTESILLA-VKTSR 213
+ N + D + +L+ V M A L G G T G +E+I+LA + R
Sbjct: 81 NKNYVDMDEYPVTTELQNRCVNMIARLFNAP-LGDGEAAVGVGTVGSSEAIMLAGLAFKR 139
Query: 214 DYMRTKKG----ITKPEMIIAESAHSAYDKAAQYFNIKVRRVPVNKEF--LADVKGFKRC 267
+ +K KP ++ + ++K A+YF ++++ V + +++ + VK +
Sbjct: 140 QWQNKRKAQGLPYDKPNIVTGANVQVCWEKFARYFEVELKEVNLREDYYVMDPVKAVE-M 198
Query: 268 INGNTIMMVGSAPGFPHGLIDPIEELGEL------ASRYDICLHVDLCLGGFVLPFARKL 321
++ NTI + G + ++ L +L + +D +HVD GGF+ PF
Sbjct: 199 VDENTICVAAILGSTLTGEFEDVKLLNDLLVEKNKQTGWDTPIHVDAASGGFIAPFL--- 255
Query: 322 GYPIPPFDFCVKGVTSISTDVHKYGLAPKGTSIVLYKNHEIRKHQFVAVTEWTGGLYVSP 381
YP +DF + V SI+ HKYGL G V+++ + + + G +
Sbjct: 256 -YPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVVWRTKTDLPDELIFHINYLGADQPTF 314
Query: 382 TIAGSRPGGLIAGAWAAMTSLGLNGYMENTGHIMEVSKKIQRGIEDIPGLFVIGKPD-MT 440
T+ S+ + + + LG GY + E +++G+E ++ K + +
Sbjct: 315 TLNFSKGSSQVIAQYYQLIRLGFEGYRNVMDNCRENMMVLRQGLEKTGRFKIVSKENGVP 374
Query: 441 VVAFG---SDSVDIFEVNDIMSSKGWHLNALQRP-NSLHICVTLQHTVIYEEFLKDLKDS 496
+VAF S + FEV + GW + A P ++ H VT+ VI E+F + L +
Sbjct: 375 LVAFSLKDSSRHNEFEVAHTLRRFGWIVPAYTMPADAQH--VTVLRVVIREDFSRTLAER 432
Query: 497 V 497
+
Sbjct: 433 L 433
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.136 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 10,983,558
Number of extensions: 456744
Number of successful extensions: 1050
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 1042
Number of HSP's successfully gapped: 6
Length of query: 539
Length of database: 11,106,569
Length adjustment: 103
Effective length of query: 436
Effective length of database: 8,282,721
Effective search space: 3611266356
Effective search space used: 3611266356
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 114 (48.5 bits)