Os12g0641200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os12g0641200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 178.47 | 0.628 | 7.64 | -0.107 | 3.34 | 2.1 | 1.16 | -1.1 | -0.954 | 6.92 | 23 | 1076 | -- | -- |
| 179.81 | 0.625 | 7.65 | -0.143 | 3.35 | 2.35 | 0.995 | -- | -0.968 | 6.95 | 22.9 | 1137 | -- | -- |
| 181.37 | 0.627 | 7.64 | -0.0759 | 3.37 | 2.22 | -- | -0.879 | -0.947 | 6.97 | 22.9 | 1182 | -- | -- |
| 182.2 | 0.629 | 7.66 | -0.172 | 3.39 | 2.45 | -- | -- | -0.98 | 6.98 | 22.63 | 1210 | -- | -- |
| 520.64 | 1.06 | 7.63 | 0.427 | -- | 4.58 | -- | -1.39 | -0.557 | -- | 34.4 | 485 | -- | -- |
| 241.59 | 0.729 | 7.74 | -0.879 | 3.37 | -- | 1.09 | -- | -1.35 | 7.12 | -- | -- | -- | -- |
| 244.7 | 0.733 | 7.74 | -0.857 | 3.37 | -- | -- | -- | -1.35 | 7.14 | -- | -- | -- | -- |
| 523.61 | 1.07 | 7.67 | 0.22 | -- | 4.6 | -- | -- | -0.63 | -- | 38.94 | 490 | -- | -- |
| 182.93 | 0.63 | 7.65 | -- | 3.39 | 2.59 | -- | -- | -0.954 | 6.99 | 22.44 | 1227 | -- | -- |
| 846.09 | 1.36 | 7.81 | -0.793 | -- | -- | -- | -- | -1.29 | -- | -- | -- | -- | -- |
| 264.05 | 0.76 | 7.72 | -- | 3.37 | -- | -- | -- | -1.25 | 7.16 | -- | -- | -- | -- |
| 524.77 | 1.07 | 7.67 | -- | -- | 4.51 | -- | -- | -0.658 | -- | 34.44 | 490 | -- | -- |
| 862.69 | 1.37 | 7.79 | -- | -- | -- | -- | -- | -1.2 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 180.28 | temperature | 25 | 720 | < th | dose dependent | rect. | 1 | 21 |
| 13 | 181.67 | temperature | 25 | 720 | < th | dose dependent | rect. | 16 | 22 |
| 18 | 181.86 | temperature | 25 | 1440 | < th | dose dependent | rect. | 22 | 1 |
| 22 | 181.93 | temperature | 25 | 720 | < th | dose dependent | rect. | 19 | 23 |
| 44 | 182.29 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 53 | 182.71 | temperature | 25 | 1440 | < th | dose dependent | rect. | 19 | 5 |
| 65 | 182.97 | temperature | 25 | 720 | < th | dose dependent | rect. | 4 | 23 |
| 74 | 183.26 | temperature | 25 | 720 | < th | dose dependent | rect. | 6 | 23 |
| 81 | 183.40 | temperature | 25 | 720 | < th | dose dependent | rect. | 10 | 23 |
| 85 | 183.51 | temperature | 25 | 720 | < th | dose dependent | rect. | 8 | 23 |
| 112 | 184.01 | temperature | 20 | 4320 | < th | dose dependent | rect. | 21 | 7 |
| 146 | 184.37 | temperature | 20 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 151 | 184.42 | temperature | 25 | 1440 | < th | dose dependent | sin | 14 | NA |
| 180 | 184.60 | temperature | 10 | 720 | > th | dose dependent | rect. | 14 | 21 |
| 181 | 184.61 | temperature | 20 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 233 | 185.00 | temperature | 25 | 1440 | < th | dose dependent | rect. | 9 | 21 |
| 286 | 185.30 | temperature | 20 | 1440 | > th | dose independent | rect. | 16 | 13 |
| 322 | 185.48 | temperature | 20 | 1440 | < th | dose independent | rect. | 16 | 14 |
| 411 | 185.80 | temperature | 20 | 1440 | > th | dose independent | sin | 13 | NA |
| 417 | 185.81 | temperature | 20 | 1440 | > th | dose independent | rect. | 11 | 20 |
| 440 | 185.89 | temperature | 25 | 720 | < th | dose dependent | sin | 1 | NA |
| 445 | 185.91 | temperature | 20 | 1440 | < th | dose independent | rect. | 11 | 20 |
| 471 | 186.02 | temperature | 20 | 1440 | < th | dose independent | sin | 13 | NA |
| 480 | 186.05 | temperature | 20 | 1440 | > th | dose independent | rect. | 17 | 20 |
| 502 | 186.11 | temperature | 20 | 1440 | < th | dose independent | rect. | 17 | 20 |
| 549 | 186.26 | temperature | 20 | 1440 | > th | dose independent | rect. | 17 | 18 |
| 562 | 186.30 | temperature | 20 | 4320 | < th | dose independent | rect. | 19 | 3 |
| 601 | 186.41 | temperature | 10 | 720 | > th | dose dependent | rect. | 6 | 22 |
| 622 | 186.48 | temperature | 10 | 720 | > th | dose dependent | rect. | 14 | 23 |
| 640 | 186.53 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 17 |
| 641 | 186.53 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 17 |
| 764 | 186.88 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 22 |
| 785 | 186.94 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 22 |
| 825 | 187.06 | wind | 1 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 830 | 187.08 | temperature | 10 | 1440 | > th | dose dependent | rect. | 23 | 1 |
| 891 | 187.25 | temperature | 20 | 1440 | > th | dose independent | no | NA | NA |
| 902 | 187.28 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 5 |
| 942 | 187.39 | temperature | 20 | 1440 | < th | dose independent | no | NA | NA |
| 966 | 187.46 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 16 |
| 985 | 187.54 | temperature | 20 | 4320 | > th | dose independent | rect. | 19 | 3 |