Os12g0639600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Soluble quinoprotein glucose dehydrogenase domain containing protein.
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Os12g0639600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Soluble quinoprotein glucose dehydrogenase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 444.53 | 0.991 | 7.13 | 0.0749 | 2.98 | 4.43 | 0.0516 | 4.51 | 0.708 | 24 | 0.8308 | 1433 | -- | -- |
| 460.33 | 0.999 | 7.07 | 0.649 | 2.99 | 3.85 | 0.265 | -- | 0.783 | 23.9 | 0.98 | 1431 | -- | -- |
| 442.47 | 0.98 | 7.16 | 0.101 | 3.05 | 4.64 | -- | 5.15 | 0.714 | 23.9 | 0.7001 | 1429 | -- | -- |
| 456.69 | 0.995 | 7.07 | 0.571 | 2.85 | 3.88 | -- | -- | 0.805 | 23.8 | 1.23 | 1445 | -- | -- |
| 574.09 | 1.12 | 6.97 | -0.0905 | -- | 6.05 | -- | 3.89 | 0.721 | -- | 1.191 | 1625 | -- | -- |
| 644.15 | 1.19 | 7.18 | -0.18 | 2.92 | -- | -0.32 | -- | 0.28 | 23.9 | -- | -- | -- | -- |
| 644.59 | 1.19 | 7.18 | -0.167 | 2.92 | -- | -- | -- | 0.281 | 23.9 | -- | -- | -- | -- |
| 553.98 | 1.1 | 7 | 0.555 | -- | 6 | -- | -- | 0.88 | -- | 1.55 | 1640 | -- | -- |
| 456.55 | 0.995 | 7.1 | -- | 2.88 | 3.58 | -- | -- | 0.762 | 24 | 1.54 | 1445 | -- | -- |
| 1181.24 | 1.61 | 7.12 | -0.0782 | -- | -- | -- | -- | 0.32 | -- | -- | -- | -- | -- |
| 645.32 | 1.19 | 7.18 | -- | 2.92 | -- | -- | -- | 0.3 | 23.9 | -- | -- | -- | -- |
| 561.72 | 1.1 | 7 | -- | -- | 5.94 | -- | -- | 0.85 | -- | 1.55 | 1641 | -- | -- |
| 1181.4 | 1.6 | 7.12 | -- | -- | -- | -- | -- | 0.329 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 439.71 | humidity | 80 | 1440 | > th | dose independent | rect. | 6 | 15 |
| 3 | 440.15 | humidity | 50 | 1440 | > th | dose dependent | rect. | 4 | 19 |
| 18 | 441.61 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 14 |
| 44 | 443.18 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 21 |
| 107 | 446.32 | radiation | 1 | 1440 | > th | dose independent | rect. | 11 | 21 |
| 108 | 446.33 | radiation | 1 | 1440 | < th | dose independent | rect. | 16 | 23 |
| 111 | 446.54 | humidity | 50 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 124 | 447.09 | radiation | 1 | 1440 | < th | dose independent | rect. | 18 | 23 |
| 126 | 447.17 | radiation | 1 | 1440 | > th | dose independent | rect. | 18 | 23 |
| 149 | 448.05 | humidity | 50 | 1440 | > th | dose dependent | no | NA | NA |
| 154 | 448.16 | humidity | 90 | 1440 | < th | dose dependent | rect. | 6 | 17 |
| 159 | 448.24 | radiation | 1 | 1440 | < th | dose independent | rect. | 4 | 17 |
| 167 | 448.28 | humidity | 50 | 1440 | > th | dose dependent | rect. | 11 | 23 |
| 221 | 448.56 | radiation | 1 | 1440 | < th | dose independent | no | NA | NA |
| 226 | 448.60 | radiation | 1 | 1440 | < th | dose independent | rect. | 20 | 23 |
| 236 | 448.67 | humidity | 50 | 1440 | > th | dose dependent | rect. | 16 | 5 |
| 242 | 448.78 | humidity | 50 | 1440 | > th | dose dependent | sin | 19 | NA |
| 301 | 449.98 | radiation | 1 | 1440 | < th | dose dependent | sin | 0 | NA |
| 309 | 450.17 | radiation | 1 | 1440 | > th | dose independent | rect. | 16 | 23 |
| 316 | 450.20 | humidity | 50 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 360 | 451.01 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 23 |
| 402 | 451.82 | radiation | 1 | 1440 | < th | dose independent | sin | 1 | NA |
| 413 | 452.05 | radiation | 1 | 1440 | > th | dose independent | no | NA | NA |
| 414 | 452.05 | radiation | 1 | 1440 | > th | dose independent | rect. | 4 | 15 |
| 472 | 452.09 | humidity | 80 | 1440 | < th | dose independent | sin | 0 | NA |
| 488 | 452.37 | humidity | 80 | 1440 | > th | dose independent | sin | 23 | NA |
| 491 | 452.45 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 21 |
| 497 | 452.61 | humidity | 90 | 720 | > th | dose dependent | rect. | 6 | 18 |
| 498 | 452.62 | radiation | 1 | 1440 | < th | dose dependent | rect. | 5 | 17 |
| 517 | 452.88 | humidity | 90 | 1440 | < th | dose dependent | rect. | 16 | 5 |
| 529 | 453.04 | humidity | 90 | 1440 | < th | dose dependent | rect. | 14 | 22 |
| 644 | 454.03 | radiation | 1 | 1440 | < th | dose dependent | no | NA | NA |
| 658 | 454.08 | radiation | 1 | 1440 | < th | dose dependent | rect. | 20 | 23 |
| 687 | 454.40 | radiation | 1 | 1440 | < th | dose independent | sin | 13 | NA |
| 707 | 454.73 | humidity | 70 | 1440 | > th | dose independent | rect. | 17 | 22 |
| 710 | 454.75 | radiation | 1 | 1440 | > th | dose independent | sin | 1 | NA |
| 728 | 454.96 | humidity | 90 | 1440 | < th | dose dependent | sin | 19 | NA |
| 730 | 454.96 | humidity | 90 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 800 | 455.66 | humidity | 70 | 1440 | > th | dose independent | rect. | 13 | 22 |
| 812 | 455.82 | humidity | 90 | 1440 | < th | dose dependent | no | NA | NA |
| 824 | 456.04 | humidity | 90 | 1440 | < th | dose dependent | rect. | 11 | 23 |
| 851 | 456.38 | radiation | 1 | 1440 | < th | dose dependent | rect. | 16 | 23 |
| 862 | 456.55 | humidity | 70 | 1440 | < th | dose independent | rect. | 14 | 21 |
| 933 | 457.69 | radiation | 1 | 1440 | > th | dose independent | sin | 13 | NA |