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Os12g0639100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Major facilitator superfamily MFS_1 protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.94 (0.019) R2 : 0.371
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.622 (0.0455) R2dC : 0.259 R2C : 0.226
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.36 (0.0399) R2dN8 : 0.145 R2N8 : 0.113
σ : 0.357
deviance : 58.37
__
_____
C
peak time of C : 10.7
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
32.17 0.266 9.86 1.39 0.609 1.09 0.325 -0.13 -0.0217 10.6 18.69 9682 -- --
32.16 0.264 9.86 1.4 0.615 1.14 0.332 -- -0.0122 10.6 18.7 10012 -- --
32.38 0.265 9.88 1.42 0.618 1.3 -- 0.323 -0.0292 10.6 18.39 10185 -- --
32.19 0.264 9.87 1.43 0.621 1.31 -- -- -0.0198 10.7 18.3 8693 -- --
55.07 0.346 9.89 1.43 -- 1.35 -- 0.376 -0.0204 -- 18.57 9528 -- --
48.07 0.325 9.92 0.599 0.629 -- 0.321 -- -0.293 10.7 -- -- -- --
48.5 0.326 9.92 0.612 0.627 -- -- -- -0.292 10.7 -- -- -- --
54.91 0.345 9.88 1.4 -- 1.31 -- -- -0.022 -- 18.4 7970 -- --
56.54 0.35 9.94 -- 0.617 0.789 -- -- -0.353 10.7 14.4 4210 -- --
72.78 0.399 9.94 0.6 -- -- -- -- -0.296 -- -- -- -- --
58.37 0.357 9.94 -- 0.622 -- -- -- -0.36 10.7 -- -- -- --
79.21 0.415 9.95 -- -- 0.813 -- -- -0.341 -- 14.2 6892 -- --
82.26 0.423 9.95 -- -- -- -- -- -0.362 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 29.43 wind 7 43200 < th dose independent rect. 22 1
2 29.52 wind 5 43200 > th dose independent rect. 23 1
5 29.57 wind 7 43200 > th dose dependent rect. 18 2
6 29.71 wind 3 43200 < th dose dependent rect. 20 4
9 29.83 wind 7 43200 > th dose independent rect. 18 1
10 29.83 wind 9 43200 < th dose independent rect. 14 18
11 29.85 wind 9 43200 > th dose independent rect. 14 18
12 29.85 wind 9 43200 > th dose independent rect. 11 22
13 29.86 wind 5 43200 > th dose dependent rect. 22 1
15 29.89 wind 9 43200 > th dose independent rect. 9 21
18 29.91 wind 9 43200 < th dose independent rect. 11 22
25 29.98 wind 9 43200 < th dose independent rect. 13 20
26 29.98 wind 9 43200 < th dose independent rect. 9 22
28 30.01 humidity 70 43200 < th dose independent rect. 16 8
32 30.02 humidity 70 43200 < th dose independent rect. 19 1
35 30.03 wind 7 43200 > th dose independent rect. 16 14
42 30.07 wind 7 43200 < th dose independent rect. 16 14
43 30.07 humidity 80 43200 < th dose dependent rect. 17 6
44 30.07 humidity 80 43200 < th dose dependent rect. 16 8
45 30.07 wind 7 43200 > th dose dependent rect. 14 18
46 30.08 wind 9 43200 > th dose independent rect. 8 12
49 30.09 wind 9 43200 > th dose independent rect. 9 15
52 30.10 wind 9 43200 < th dose independent rect. 8 12
63 30.12 humidity 70 43200 > th dose independent rect. 19 1
65 30.12 wind 9 43200 < th dose independent rect. 8 15
68 30.12 wind 7 43200 > th dose dependent rect. 11 22
71 30.14 humidity 60 43200 > th dose independent sin 15 NA
72 30.14 humidity 70 43200 > th dose independent rect. 16 8
75 30.14 humidity 70 43200 < th dose dependent rect. 8 1
77 30.15 wind 9 43200 > th dose independent sin 22 NA
81 30.15 humidity 70 43200 < th dose independent rect. 15 21
98 30.17 humidity 80 43200 < th dose dependent rect. 18 3
99 30.17 wind 7 43200 > th dose dependent rect. 9 20
103 30.18 humidity 70 43200 > th dose independent rect. 17 6
110 30.18 wind 7 43200 > th dose dependent rect. 13 20
114 30.19 humidity 60 43200 > th dose independent rect. 13 19
152 30.24 humidity 60 43200 < th dose independent sin 15 NA
157 30.24 wind 3 43200 < th dose dependent rect. 21 1
162 30.25 wind 9 43200 < th dose independent sin 23 NA
173 30.25 wind 7 43200 > th dose dependent rect. 9 16
184 30.27 wind 9 43200 > th dose independent sin 14 NA
186 30.27 wind 9 43200 < th dose independent rect. 18 2
187 30.27 humidity 70 43200 > th dose independent rect. 18 3
196 30.27 humidity 60 43200 < th dose independent rect. 13 19
208 30.28 wind 7 43200 > th dose dependent sin 22 NA
214 30.29 wind 3 43200 < th dose independent rect. 20 2
216 30.29 humidity 70 43200 > th dose independent rect. 16 20
226 30.29 wind 7 43200 > th dose dependent rect. 8 12
241 30.30 humidity 90 14400 > th dose dependent rect. 24 15
247 30.31 wind 9 43200 < th dose independent rect. 4 16
253 30.31 wind 7 43200 > th dose dependent rect. 16 14
255 30.32 wind 9 43200 < th dose independent sin 14 NA
256 30.32 humidity 60 43200 > th dose independent rect. 8 1
261 30.32 humidity 60 43200 > th dose independent rect. 19 21
277 30.33 wind 9 43200 < th dose independent rect. 4 19
301 30.34 humidity 80 43200 < th dose dependent rect. 6 18
324 30.35 humidity 80 43200 < th dose dependent sin 16 NA
393 30.38 wind 9 43200 < th dose independent rect. 24 23
395 30.38 wind 7 43200 > th dose dependent sin 14 NA
455 30.41 humidity 60 43200 < th dose independent rect. 8 1
488 30.42 humidity 60 43200 > th dose independent no NA NA
527 30.43 wind 3 43200 > th dose independent rect. 20 2
543 30.43 humidity 60 43200 > th dose independent rect. 2 23
568 30.44 wind 9 43200 > th dose independent rect. 4 16
596 30.44 humidity 80 43200 < th dose dependent rect. 14 21
601 30.45 temperature 20 14400 < th dose independent rect. 21 1
622 30.45 wind 9 43200 > th dose dependent sin 16 NA
635 30.45 humidity 60 43200 < th dose dependent rect. 19 16
646 30.46 wind 9 43200 < th dose independent rect. 16 4
652 30.46 wind 9 43200 > th dose independent rect. 4 19
659 30.46 wind 9 43200 < th dose independent rect. 21 23
728 30.48 humidity 60 43200 > th dose independent rect. 22 23
773 30.49 humidity 80 43200 < th dose dependent no NA NA
801 30.50 wind 9 43200 > th dose independent rect. 24 20
814 30.50 wind 1 43200 > th dose dependent rect. 20 4
836 30.50 humidity 80 43200 < th dose dependent rect. 21 23
846 30.51 humidity 60 43200 < th dose independent rect. 19 15
901 30.52 wind 9 43200 > th dose independent rect. 24 23
980 30.54 humidity 70 43200 < th dose independent no NA NA