Os12g0638700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Plasma membrane H+ ATPase (EC 3.6.3.6).
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Os12g0638700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Plasma membrane H+ ATPase (EC 3.6.3.6).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 77.01 | 0.412 | 11.2 | -1.75 | 0.727 | 1.52 | -0.792 | 1.7 | -0.733 | 14.9 | 22.6 | 10 | -- | -- |
| 78.48 | 0.416 | 11.3 | -2.02 | 0.717 | 1.64 | -0.369 | -- | -0.81 | 15 | 22.6 | 10 | -- | -- |
| 78.38 | 0.415 | 11.2 | -1.89 | 0.736 | 1.55 | -- | 0.866 | -0.767 | 14.9 | 22.6 | 10 | -- | -- |
| 78.91 | 0.416 | 11.3 | -2.02 | 0.72 | 1.62 | -- | -- | -0.804 | 14.9 | 22.78 | 7 | -- | -- |
| 97.6 | 0.463 | 11.3 | -2.12 | -- | 2.27 | -- | 0.2 | -0.893 | -- | 23.1 | 10 | -- | -- |
| 119.45 | 0.512 | 11.2 | -1.71 | 1.34 | -- | 0.0729 | -- | -0.564 | 14.8 | -- | -- | -- | -- |
| 119.47 | 0.512 | 11.2 | -1.71 | 1.34 | -- | -- | -- | -0.563 | 14.8 | -- | -- | -- | -- |
| 97.63 | 0.462 | 11.3 | -2.15 | -- | 2.29 | -- | -- | -0.902 | -- | 23.1 | 10 | -- | -- |
| 178.69 | 0.626 | 11.2 | -- | 0.964 | 1.08 | -- | -- | -0.45 | 14.8 | 24.8 | 6 | -- | -- |
| 224 | 0.699 | 11.2 | -1.77 | -- | -- | -- | -- | -0.598 | -- | -- | -- | -- | -- |
| 196.74 | 0.656 | 11.2 | -- | 1.38 | -- | -- | -- | -0.373 | 14.8 | -- | -- | -- | -- |
| 212.99 | 0.682 | 11.2 | -- | -- | 1.96 | -- | -- | -0.558 | -- | 24.39 | 4 | -- | -- |
| 306.6 | 0.817 | 11.2 | -- | -- | -- | -- | -- | -0.401 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 72.17 | temperature | 30 | 270 | < th | dose dependent | rect. | 2 | 17 |
| 2 | 72.61 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 19 |
| 9 | 73.25 | temperature | 30 | 90 | < th | dose dependent | sin | 1 | NA |
| 13 | 74.12 | temperature | 20 | 90 | > th | dose dependent | sin | 2 | NA |
| 16 | 74.24 | temperature | 20 | 270 | > th | dose dependent | rect. | 18 | 21 |
| 21 | 74.62 | temperature | 10 | 90 | > th | dose dependent | sin | 1 | NA |
| 24 | 74.90 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 16 |
| 39 | 75.41 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 14 |
| 40 | 75.43 | temperature | 10 | 10 | > th | dose dependent | sin | 0 | NA |
| 52 | 75.82 | temperature | 20 | 10 | > th | dose dependent | rect. | 8 | 22 |
| 76 | 76.58 | temperature | 25 | 270 | > th | dose dependent | sin | 7 | NA |
| 121 | 77.71 | temperature | 20 | 10 | > th | dose dependent | rect. | 8 | 17 |
| 208 | 79.29 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 253 | 80.06 | temperature | 20 | 10 | > th | dose dependent | no | NA | NA |
| 273 | 80.22 | temperature | 20 | 270 | > th | dose dependent | rect. | 6 | 9 |
| 346 | 81.21 | temperature | 20 | 90 | > th | dose dependent | rect. | 2 | 23 |
| 355 | 81.29 | temperature | 20 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 364 | 81.35 | temperature | 25 | 270 | < th | dose independent | rect. | 3 | 17 |
| 433 | 81.86 | temperature | 20 | 10 | > th | dose dependent | rect. | 8 | 12 |
| 453 | 82.00 | temperature | 25 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 521 | 82.51 | temperature | 25 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 535 | 82.56 | wind | 1 | 14400 | > th | dose independent | rect. | 10 | 2 |
| 547 | 82.61 | wind | 1 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 592 | 82.81 | temperature | 25 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 593 | 82.82 | temperature | 20 | 10 | > th | dose dependent | rect. | 8 | 10 |
| 607 | 82.93 | wind | 1 | 14400 | < th | dose dependent | rect. | 10 | 1 |
| 704 | 83.52 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 752 | 83.77 | temperature | 25 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 753 | 83.77 | temperature | 30 | 90 | < th | dose dependent | rect. | 13 | 23 |
| 856 | 84.23 | temperature | 30 | 14400 | < th | dose independent | rect. | 18 | 16 |
| 865 | 84.25 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 23 |
| 874 | 84.28 | temperature | 25 | 10 | > th | dose dependent | rect. | 5 | 13 |
| 886 | 84.34 | temperature | 30 | 14400 | > th | dose independent | rect. | 18 | 16 |
| 917 | 84.42 | temperature | 30 | 90 | < th | dose dependent | rect. | 9 | 23 |
| 923 | 84.45 | temperature | 25 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 935 | 84.49 | temperature | 30 | 14400 | < th | dose independent | rect. | 5 | 5 |
| 962 | 84.57 | temperature | 25 | 270 | > th | dose independent | sin | 2 | NA |
| 972 | 84.59 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 973 | 84.60 | temperature | 30 | 14400 | > th | dose independent | rect. | 8 | 2 |