Os12g0638200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Peptide transporter.
FiT-DB / Search/ Help/ Sample detail
|
Os12g0638200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Peptide transporter.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 152.74 | 0.581 | 5.5 | -2.43 | 0.0277 | -2.34 | -3.91 | 5.48 | -0.299 | 13.1 | 14.69 | 106 | -- | -- |
| 170.8 | 0.613 | 5.6 | -3.24 | 0.218 | -2.42 | -2.7 | -- | -0.494 | 11.9 | 14.69 | 106 | -- | -- |
| 193.59 | 0.648 | 5.45 | -2.11 | 0.818 | -1.53 | -- | 6.95 | -0.278 | 2.67 | -15.38 | 950 | -- | -- |
| 200.64 | 0.66 | 5.58 | -3.29 | 0.208 | -2.49 | -- | -- | -0.482 | 10.7 | 14.71 | 48 | -- | -- |
| 205.13 | 0.671 | 5.61 | -3.33 | -- | -2.26 | -- | 0.382 | -0.516 | -- | 14.8 | 440 | -- | -- |
| 226.87 | 0.706 | 5.68 | -3.73 | 0.573 | -- | 3.03 | -- | -0.834 | 2.13 | -- | -- | -- | -- |
| 256.7 | 0.75 | 5.68 | -3.83 | 0.672 | -- | -- | -- | -0.855 | 3.88 | -- | -- | -- | -- |
| 202.41 | 0.663 | 5.61 | -3.35 | -- | -2.29 | -- | -- | -0.524 | -- | 14.78 | 71 | -- | -- |
| 471.01 | 1.02 | 5.47 | -- | 0.645 | -4.02 | -- | -- | 0.049 | 12.7 | 8.433 | 65 | -- | -- |
| 281.46 | 0.784 | 5.68 | -3.8 | -- | -- | -- | -- | -0.837 | -- | -- | -- | -- | -- |
| 642.45 | 1.19 | 5.58 | -- | 0.597 | -- | -- | -- | -0.429 | 3.96 | -- | -- | -- | -- |
| 478.9 | 1.02 | 5.5 | -- | -- | -3.45 | -- | -- | -0.0317 | -- | 13.86 | 96 | -- | -- |
| 661.97 | 1.2 | 5.59 | -- | -- | -- | -- | -- | -0.416 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 151.33 | temperature | 15 | 90 | > th | dose dependent | rect. | 1 | 23 |
| 2 | 152.88 | temperature | 15 | 90 | > th | dose dependent | no | NA | NA |
| 4 | 153.25 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 23 |
| 8 | 153.85 | temperature | 30 | 90 | < th | dose dependent | rect. | 17 | 23 |
| 9 | 153.88 | temperature | 15 | 90 | > th | dose dependent | rect. | 9 | 23 |
| 13 | 154.62 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 19 | 155.26 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 21 | 155.56 | temperature | 15 | 270 | > th | dose dependent | rect. | 22 | 23 |
| 23 | 155.67 | temperature | 30 | 270 | < th | dose dependent | rect. | 15 | 23 |
| 34 | 156.15 | temperature | 15 | 10 | > th | dose dependent | rect. | 9 | 23 |
| 36 | 156.19 | temperature | 15 | 270 | > th | dose dependent | rect. | 6 | 23 |
| 42 | 156.61 | temperature | 15 | 270 | > th | dose dependent | rect. | 19 | 23 |
| 44 | 156.65 | temperature | 30 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 53 | 156.95 | temperature | 30 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 59 | 157.26 | temperature | 30 | 270 | < th | dose dependent | rect. | 10 | 23 |
| 81 | 158.45 | temperature | 30 | 30 | < th | dose dependent | rect. | 23 | 23 |
| 135 | 161.05 | temperature | 15 | 270 | > th | dose dependent | rect. | 13 | 23 |
| 145 | 161.56 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 196 | 162.93 | temperature | 15 | 30 | > th | dose dependent | sin | 22 | NA |
| 224 | 163.59 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 332 | 166.48 | temperature | 30 | 270 | < th | dose dependent | sin | 0 | NA |
| 357 | 166.95 | temperature | 20 | 10 | > th | dose dependent | rect. | 9 | 20 |
| 395 | 167.62 | humidity | 50 | 43200 | < th | dose dependent | rect. | 15 | 17 |
| 435 | 168.25 | humidity | 50 | 43200 | < th | dose dependent | rect. | 15 | 1 |
| 483 | 168.72 | humidity | 50 | 43200 | < th | dose dependent | rect. | 15 | 7 |
| 571 | 169.66 | humidity | 50 | 43200 | < th | dose independent | rect. | 14 | 8 |
| 591 | 169.77 | humidity | 50 | 43200 | < th | dose independent | sin | 13 | NA |
| 597 | 169.83 | humidity | 50 | 43200 | < th | dose independent | rect. | 14 | 15 |
| 603 | 169.87 | temperature | 20 | 30 | > th | dose dependent | rect. | 9 | 15 |
| 632 | 170.15 | temperature | 15 | 720 | > th | dose dependent | rect. | 22 | 19 |
| 641 | 170.23 | humidity | 50 | 43200 | < th | dose independent | rect. | 15 | 3 |
| 654 | 170.31 | temperature | 30 | 720 | < th | dose dependent | sin | 4 | NA |
| 663 | 170.38 | humidity | 50 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 670 | 170.44 | temperature | 30 | 720 | < th | dose dependent | rect. | 1 | 16 |
| 675 | 170.46 | humidity | 50 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 690 | 170.53 | humidity | 50 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 703 | 170.61 | humidity | 90 | 43200 | < th | dose dependent | rect. | 6 | 12 |
| 709 | 170.66 | humidity | 80 | 43200 | < th | dose dependent | rect. | 11 | 7 |
| 718 | 170.68 | humidity | 80 | 43200 | < th | dose dependent | rect. | 12 | 4 |
| 741 | 170.75 | temperature | 30 | 270 | < th | dose dependent | rect. | 4 | 13 |
| 748 | 170.78 | humidity | 50 | 43200 | < th | dose dependent | sin | 12 | NA |
| 749 | 170.78 | humidity | 60 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 817 | 170.98 | humidity | 80 | 43200 | < th | dose dependent | sin | 23 | NA |
| 821 | 170.99 | humidity | 60 | 43200 | < th | dose independent | rect. | 5 | 8 |
| 882 | 171.15 | humidity | 80 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 934 | 171.27 | humidity | 50 | 43200 | > th | dose independent | rect. | 14 | 9 |
| 937 | 171.27 | humidity | 50 | 43200 | > th | dose independent | rect. | 14 | 13 |