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Os12g0637300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.2 (0.0267) R2 : 0.745
β1 : -2.1 (0.0976) R2dD : 0.268 R2D : 0.266
β2 : 1.87 (0.0641) R2dC : 0.479 R2C : 0.483
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.103 (0.0569) R2dN8 : 0.00248 R2N8 : -0.00895
σ : 0.501
deviance : 114.58
__
_____
C
peak time of C : 10.4
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
86.19 0.436 10.2 -2.02 1.9 -0.771 -1.76 1.87 -0.237 9.86 90.56 192 -- --
92.13 0.447 10.2 -1.95 1.91 -0.611 -1.86 -- -0.201 9.93 89 230 -- --
97.39 0.46 10.2 -2.08 1.9 -0.776 -- 2.06 -0.25 9.79 90.4 157 -- --
104.93 0.477 10.2 -2.02 1.96 -0.76 -- -- -0.217 9.8 90.7 275 -- --
287.86 0.79 10.2 -2.09 -- -0.923 -- 1.9 -0.292 -- 87.88 2 -- --
100.61 0.47 10.2 -2.02 1.86 -- -1.85 -- -0.0976 10.5 -- -- -- --
114.58 0.501 10.2 -2.1 1.87 -- -- -- -0.103 10.4 -- -- -- --
275.57 0.777 10.2 -2.1 -- -0.96 -- -- -0.17 -- 65.37 2 -- --
210.6 0.676 10.2 -- 2.02 -1 -- -- -0.0456 9.6 88.76 283 -- --
328.87 0.847 10.2 -2.13 -- -- -- -- -0.11 -- -- -- -- --
230.8 0.711 10.1 -- 1.88 -- -- -- 0.13 10.5 -- -- -- --
391.05 0.921 10.2 -- -- -1 -- -- 0.0643 -- 65 2 -- --
448.64 0.989 10.2 -- -- -- -- -- 0.126 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 77.22 temperature 10.0 270 > th dose dependent rect. 17 7
6 79.45 temperature 10.0 270 > th dose dependent rect. 18 17
7 79.64 humidity 90.0 10 < th dose independent rect. 20 18
10 79.70 humidity 90.0 90 < th dose independent rect. 20 18
14 79.82 wind 9.0 270 < th dose independent rect. 1 16
18 80.24 radiation 10.0 270 < th dose independent rect. 17 8
19 80.24 precipitation 0.1 270 < th dose independent rect. 17 8
20 80.24 precipitation 0.1 270 < th dose dependent rect. 17 8
22 80.29 temperature 10.0 270 > th dose independent rect. 17 8
26 80.29 temperature 10.0 270 > th dose independent rect. 1 16
27 80.29 atmosphere 1015.0 270 < th dose independent rect. 1 16
29 80.31 atmosphere 995.0 270 > th dose independent rect. 1 16
32 80.35 precipitation 0.1 270 < th dose independent rect. 1 16
33 80.35 precipitation 0.1 270 < th dose dependent rect. 1 16
34 80.36 wind 9.0 270 < th dose independent rect. 17 8
38 80.43 humidity 50.0 270 > th dose independent rect. 17 8
40 80.48 wind 9.0 270 < th dose independent rect. 11 7
41 80.48 wind 7.0 270 < th dose independent rect. 18 17
42 80.49 radiation 1.0 270 > th dose independent rect. 17 21
43 80.51 atmosphere 995.0 270 > th dose independent rect. 11 7
44 80.52 radiation 40.0 270 < th dose dependent rect. 17 8
46 80.56 humidity 60.0 270 > th dose independent rect. 18 17
52 80.57 humidity 60.0 270 > th dose dependent rect. 22 9
59 80.63 atmosphere 1015.0 270 < th dose independent rect. 17 7
62 80.66 wind 1.0 270 > th dose independent rect. 11 7
67 80.74 radiation 1.0 270 > th dose independent rect. 18 19
69 80.78 radiation 40.0 270 < th dose independent rect. 18 19
76 80.83 precipitation 0.1 270 < th dose independent rect. 4 9
77 80.83 precipitation 0.1 270 < th dose dependent rect. 4 9
78 80.84 radiation 1.0 270 > th dose independent rect. 4 9
95 80.92 temperature 10.0 270 > th dose independent rect. 11 7
96 80.92 atmosphere 1015.0 270 < th dose independent rect. 11 7
97 80.92 temperature 10.0 270 > th dose independent rect. 18 17
101 80.96 humidity 50.0 270 > th dose independent rect. 4 9
103 80.98 precipitation 0.1 270 < th dose independent rect. 18 17
104 80.98 precipitation 0.1 270 < th dose dependent rect. 18 17
107 81.02 wind 1.0 270 > th dose independent rect. 17 7
108 81.02 wind 9.0 270 < th dose independent rect. 13 15
115 81.11 precipitation 0.1 270 < th dose independent rect. 11 7
117 81.11 precipitation 0.1 270 < th dose dependent rect. 11 7
124 81.18 temperature 10.0 270 > th dose independent rect. 4 9
125 81.18 atmosphere 995.0 270 > th dose independent rect. 4 9
126 81.18 atmosphere 1015.0 270 < th dose independent rect. 4 9
127 81.18 temperature 10.0 270 > th dose independent rect. 13 15
129 81.19 atmosphere 995.0 270 > th dose independent rect. 13 15
137 81.29 atmosphere 995.0 270 > th dose independent rect. 18 17
182 81.62 wind 9.0 270 < th dose independent rect. 13 4
183 81.64 atmosphere 995.0 270 > th dose independent rect. 13 4
184 81.64 wind 9.0 270 < th dose independent rect. 4 9
186 81.64 humidity 50.0 270 > th dose independent rect. 17 20
193 81.71 atmosphere 1015.0 270 < th dose independent rect. 18 18
195 81.73 precipitation 0.1 270 < th dose independent rect. 17 20
196 81.73 precipitation 0.1 270 < th dose dependent rect. 17 20
209 81.85 precipitation 0.1 270 < th dose independent rect. 13 4
211 81.85 precipitation 0.1 270 < th dose dependent rect. 13 4
212 81.86 atmosphere 995.0 270 > th dose independent rect. 17 7
216 81.88 temperature 10.0 10 > th dose dependent rect. 20 18
219 81.89 precipitation 0.1 270 < th dose independent rect. 13 15
220 81.89 precipitation 0.1 270 < th dose dependent rect. 13 15
222 81.91 temperature 10.0 270 > th dose independent rect. 13 4
224 81.91 atmosphere 1010.0 270 < th dose independent rect. 13 4
229 81.91 temperature 10.0 270 > th dose independent rect. 17 20
266 82.10 atmosphere 995.0 270 > th dose dependent rect. 12 6
269 82.12 temperature 30.0 270 < th dose independent rect. 18 17
276 82.15 radiation 1.0 270 < th dose independent rect. 23 12
279 82.16 radiation 1.0 270 < th dose independent rect. 23 14
295 82.23 radiation 1.0 270 < th dose independent rect. 23 18
304 82.27 radiation 1.0 270 < th dose independent rect. 23 16
311 82.35 radiation 10.0 270 < th dose independent rect. 7 17
319 82.37 temperature 10.0 10 > th dose dependent rect. 20 6
330 82.42 radiation 10.0 270 < th dose independent rect. 9 15
338 82.45 radiation 40.0 270 < th dose dependent rect. 7 17
376 82.61 temperature 30.0 270 < th dose independent rect. 18 6
391 82.64 humidity 60.0 90 > th dose dependent rect. 1 8
405 82.69 atmosphere 995.0 270 > th dose dependent rect. 13 4
411 82.72 humidity 90.0 270 < th dose independent rect. 12 5
415 82.74 humidity 80.0 270 > th dose independent rect. 23 7
439 82.81 humidity 50.0 270 > th dose independent rect. 6 17
446 82.84 radiation 1.0 270 < th dose dependent rect. 23 19
447 82.85 radiation 1.0 270 > th dose independent sin 5 NA
454 82.90 temperature 25.0 270 < th dose independent rect. 23 7
456 82.91 wind 1.0 270 > th dose independent rect. 18 17
480 83.02 radiation 1.0 270 < th dose dependent rect. 23 11
482 83.02 radiation 1.0 270 < th dose dependent rect. 23 14
489 83.03 radiation 20.0 270 < th dose dependent rect. 23 8
491 83.04 radiation 1.0 270 < th dose independent sin 6 NA
547 83.17 atmosphere 995.0 10 > th dose dependent rect. 14 6
564 83.21 atmosphere 995.0 270 > th dose independent rect. 17 20
597 83.33 radiation 1.0 270 < th dose dependent sin 5 NA
617 83.41 temperature 15.0 270 > th dose independent rect. 7 16
625 83.43 wind 9.0 10 < th dose independent rect. 14 6
633 83.45 precipitation 0.1 270 < th dose independent rect. 6 17
634 83.45 precipitation 0.1 270 < th dose dependent rect. 6 17
639 83.48 temperature 10.0 270 > th dose independent rect. 23 7
641 83.48 humidity 50.0 270 > th dose independent rect. 23 7
644 83.48 atmosphere 995.0 270 > th dose independent rect. 23 7
645 83.48 radiation 20.0 270 < th dose independent rect. 23 7
658 83.50 wind 9.0 270 < th dose independent rect. 23 7
661 83.51 temperature 10.0 10 > th dose independent rect. 14 6
663 83.51 atmosphere 1010.0 10 < th dose independent rect. 14 6
667 83.51 temperature 10.0 10 > th dose independent rect. 20 18
668 83.51 atmosphere 995.0 10 > th dose independent rect. 20 18
681 83.55 precipitation 0.1 10 < th dose independent rect. 14 6
683 83.55 precipitation 0.1 10 < th dose dependent rect. 14 6
691 83.56 atmosphere 1015.0 10 < th dose independent rect. 20 18
693 83.57 atmosphere 1015.0 270 < th dose independent rect. 6 17
694 83.57 wind 9.0 10 < th dose independent rect. 20 18
726 83.63 precipitation 0.1 10 < th dose independent rect. 20 18
728 83.63 precipitation 0.1 10 < th dose dependent rect. 20 18
732 83.65 radiation 30.0 270 < th dose independent rect. 7 17
739 83.67 wind 1.0 270 > th dose independent rect. 4 9
742 83.68 precipitation 0.1 270 < th dose independent rect. 23 7
746 83.68 precipitation 0.1 270 < th dose dependent rect. 23 7
752 83.71 radiation 40.0 10 < th dose independent rect. 14 6
766 83.75 radiation 30.0 43200 > th dose independent rect. 11 1
812 83.88 humidity 50.0 10 > th dose independent rect. 20 18
813 83.89 wind 1.0 10 > th dose independent rect. 14 6
825 83.92 humidity 70.0 90 > th dose dependent rect. 1 10
850 83.97 humidity 60.0 14400 > th dose independent rect. 9 1
908 84.07 atmosphere 995.0 10 > th dose independent rect. 14 6
909 84.07 humidity 90.0 90 < th dose independent rect. 4 10
918 84.09 radiation 1.0 270 > th dose independent rect. 13 4
933 84.11 radiation 30.0 43200 < th dose independent rect. 11 1
967 84.15 wind 9.0 270 < th dose dependent rect. 17 7