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Os12g0637200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Metallophosphoesterase domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.1 (0.0186) R2 : 0.562
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.746 (0.0549) R2dC : 0.233 R2C : -0.194
β3 : 1.36 (0.058) R2dE : 0.749 R2E : 0.329
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0266 (0.0398) R2dN8 : 0.000885 R2N8 : 0.007
σ : 0.348
deviance : 55.73
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_____
C
peak time of C : 3.89
E
wheather : temperature
threshold : 29.03
memory length : 275
response mode : < th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 7.77
open length of G : 6.27

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
48.78 0.328 10.1 0.286 0.768 1.35 0.44 -0.907 0.0256 3.63 29.2 278 7.52 6.63
50.52 0.331 10.1 0.222 0.767 1.4 1.22 -- 0.019 3.35 29.08 282 7.57 6.33
49.05 0.326 10.1 0.322 0.777 1.35 -- -1.15 0.0302 3.63 29.2 276 7.57 6.76
55.02 0.345 10.1 0.174 0.753 1.42 -- -- 0.0021 3.81 29.1 280 7.73 6.35
68.43 0.385 10.1 0.388 -- 1.05 -- -0.849 0.031 -- 26.6 277 7 6.73
91.19 0.448 10.1 0.0629 0.718 -- -0.656 -- -0.221 9.45 -- -- -- --
92.56 0.451 10.1 0.0363 0.728 -- -- -- -0.223 9.13 -- -- -- --
72.11 0.395 10.1 0.222 -- 1.11 -- -- 0.0135 -- 26.65 291 7.15 6
55.73 0.348 10.1 -- 0.746 1.36 -- -- -0.0266 3.89 29.03 275 7.77 6.27
123.23 0.519 10.2 0.0343 -- -- -- -- -0.219 -- -- -- -- --
92.6 0.45 10.1 -- 0.728 -- -- -- -0.227 9.13 -- -- -- --
73.27 0.399 10.1 -- -- 1.06 -- -- -0.037 -- 27.1 290 7.18 5.98
123.26 0.518 10.2 -- -- -- -- -- -0.223 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 50.68 temperature 10.0 270 > th dose dependent rect. 3 16
4 53.21 temperature 10.0 270 > th dose dependent rect. 19 8
9 54.81 temperature 30.0 270 < th dose independent rect. 8 6
23 56.49 wind 1.0 270 > th dose independent rect. 7 7
24 56.58 temperature 10.0 270 > th dose independent rect. 7 7
25 56.58 atmosphere 995.0 270 > th dose independent rect. 7 7
26 56.58 atmosphere 1015.0 270 < th dose independent rect. 7 7
27 56.58 temperature 10.0 270 > th dose independent rect. 14 17
29 56.76 precipitation 0.1 270 < th dose independent rect. 7 7
30 56.76 precipitation 0.1 270 < th dose dependent rect. 7 7
32 56.85 temperature 30.0 270 < th dose dependent rect. 8 6
35 56.98 wind 9.0 270 < th dose independent rect. 7 7
38 57.06 wind 9.0 270 < th dose independent rect. 14 17
40 57.26 temperature 30.0 270 < th dose independent rect. 20 17
41 57.32 precipitation 0.1 270 < th dose independent rect. 18 9
42 57.32 precipitation 0.1 270 < th dose dependent rect. 18 9
47 57.48 temperature 30.0 270 < th dose independent rect. 19 19
49 57.62 humidity 50.0 270 > th dose independent rect. 7 7
53 57.87 radiation 40.0 270 < th dose independent rect. 14 17
64 58.24 radiation 1.0 270 > th dose independent rect. 7 7
76 58.65 atmosphere 995.0 270 > th dose independent rect. 14 17
90 58.98 precipitation 0.1 270 < th dose independent rect. 14 17
91 58.98 precipitation 0.1 270 < th dose dependent rect. 14 17
101 59.18 radiation 10.0 270 < th dose dependent rect. 18 9
102 59.22 radiation 1.0 270 < th dose independent rect. 18 9
105 59.31 wind 9.0 270 < th dose independent rect. 18 9
112 59.41 temperature 10.0 270 > th dose independent rect. 18 9
113 59.41 humidity 50.0 270 > th dose independent rect. 18 9
117 59.41 temperature 10.0 270 > th dose independent rect. 3 15
118 59.41 atmosphere 1015.0 270 < th dose independent rect. 3 15
121 59.43 atmosphere 1015.0 270 < th dose independent rect. 20 17
126 59.54 atmosphere 995.0 270 > th dose independent rect. 18 9
132 59.58 wind 9.0 270 < th dose independent rect. 3 15
133 59.60 precipitation 0.1 270 < th dose independent rect. 20 17
134 59.60 precipitation 0.1 270 < th dose dependent rect. 20 17
152 59.98 temperature 10.0 270 > th dose independent rect. 13 7
153 59.98 atmosphere 1015.0 270 < th dose independent rect. 13 7
154 59.98 temperature 10.0 270 > th dose independent rect. 20 17
155 59.98 atmosphere 995.0 270 > th dose independent rect. 20 17
171 60.24 precipitation 0.1 270 < th dose independent rect. 3 15
172 60.24 precipitation 0.1 270 < th dose dependent rect. 3 15
178 60.31 wind 9.0 270 < th dose independent rect. 20 17
191 60.37 temperature 30.0 270 < th dose independent rect. 19 8
208 60.39 wind 9.0 270 < th dose independent rect. 13 7
219 60.65 humidity 50.0 270 > th dose independent rect. 20 17
223 60.68 temperature 30.0 270 < th dose independent rect. 8 17
228 60.76 wind 1.0 270 > th dose independent rect. 13 7
238 60.84 temperature 30.0 10 < th dose independent rect. 11 5
263 61.05 precipitation 0.1 270 < th dose independent rect. 13 7
264 61.05 precipitation 0.1 270 < th dose dependent rect. 13 7
294 61.38 atmosphere 1015.0 270 < th dose independent rect. 19 8
301 61.47 temperature 30.0 270 < th dose independent rect. 11 1
306 61.49 wind 1.0 270 > th dose independent rect. 9 3
308 61.50 atmosphere 995.0 270 > th dose independent rect. 13 7
333 61.79 temperature 10.0 270 > th dose independent rect. 9 3
334 61.79 atmosphere 995.0 270 > th dose independent rect. 9 3
335 61.79 atmosphere 1015.0 270 < th dose independent rect. 9 3
337 61.79 temperature 10.0 270 > th dose independent rect. 12 21
340 61.81 precipitation 0.1 270 < th dose independent rect. 9 3
341 61.81 precipitation 0.1 270 < th dose dependent rect. 9 3
350 61.88 temperature 10.0 270 > th dose dependent rect. 13 6
366 62.04 wind 9.0 270 < th dose independent rect. 9 3
370 62.05 temperature 10.0 270 > th dose dependent rect. 12 8
395 62.32 radiation 1.0 270 > th dose independent rect. 9 3
408 62.46 humidity 50.0 270 > th dose independent rect. 9 3
428 62.53 wind 9.0 270 < th dose independent rect. 12 21
442 62.62 temperature 30.0 30 < th dose independent rect. 11 16
463 62.74 humidity 50.0 270 > th dose independent rect. 8 17
464 62.74 radiation 40.0 90 < th dose dependent rect. 16 17
491 62.91 radiation 40.0 10 < th dose independent rect. 16 19
513 63.01 radiation 40.0 10 < th dose independent rect. 16 17
520 63.06 radiation 40.0 270 < th dose independent rect. 14 5
522 63.06 temperature 20.0 720 > th dose dependent rect. 4 5
526 63.09 precipitation 0.1 270 < th dose independent rect. 8 17
528 63.09 precipitation 0.1 270 < th dose dependent rect. 8 17
529 63.10 wind 1.0 270 > th dose independent rect. 19 8
530 63.10 wind 1.0 270 > th dose independent rect. 20 17
538 63.16 radiation 30.0 270 < th dose independent rect. 1 7
557 63.23 radiation 40.0 10 < th dose dependent rect. 16 19
562 63.30 atmosphere 1015.0 270 < th dose dependent rect. 14 5
568 63.33 radiation 40.0 270 < th dose independent rect. 15 3
586 63.40 atmosphere 995.0 270 > th dose independent rect. 3 15
588 63.40 radiation 1.0 270 > th dose independent rect. 14 17
603 63.46 wind 1.0 10 > th dose independent rect. 9 7
607 63.48 wind 1.0 10 > th dose independent rect. 11 5
612 63.52 humidity 50.0 270 > th dose independent rect. 14 17
616 63.55 temperature 10.0 10 > th dose independent rect. 9 7
618 63.55 atmosphere 1015.0 10 < th dose independent rect. 9 7
619 63.55 precipitation 0.1 10 < th dose independent rect. 9 7
620 63.55 temperature 10.0 10 > th dose independent rect. 16 17
621 63.55 precipitation 0.1 10 < th dose dependent rect. 9 7
630 63.58 humidity 70.0 270 > th dose independent rect. 1 7
632 63.59 atmosphere 995.0 10 > th dose independent rect. 9 7
641 63.64 atmosphere 995.0 270 > th dose dependent rect. 8 6
643 63.65 temperature 30.0 10 < th dose independent rect. 11 3
676 63.76 atmosphere 995.0 10 > th dose independent rect. 11 5
687 63.83 temperature 10.0 10 > th dose independent rect. 11 5
689 63.83 atmosphere 1015.0 10 < th dose independent rect. 11 5
690 63.83 precipitation 0.1 10 < th dose independent rect. 11 5
691 63.83 wind 7.0 270 < th dose independent rect. 1 7
692 63.83 temperature 10.0 10 > th dose independent rect. 16 19
694 63.83 precipitation 0.1 270 < th dose independent rect. 12 21
695 63.83 precipitation 0.1 10 < th dose dependent rect. 11 5
698 63.83 precipitation 0.1 270 < th dose dependent rect. 12 21
704 63.84 atmosphere 1015.0 270 < th dose independent rect. 8 17
712 63.88 temperature 10.0 270 > th dose independent rect. 1 7
714 63.88 temperature 30.0 270 < th dose independent rect. 1 7
715 63.88 humidity 50.0 270 > th dose independent rect. 1 7
717 63.88 atmosphere 995.0 270 > th dose independent rect. 1 7
718 63.88 atmosphere 1015.0 270 < th dose independent rect. 1 7
720 63.88 temperature 10.0 270 > th dose independent rect. 8 17
731 63.93 wind 1.0 270 > th dose independent rect. 14 17
732 63.93 atmosphere 995.0 270 > th dose independent rect. 12 21
734 63.94 precipitation 0.1 270 < th dose independent rect. 1 7
736 63.94 precipitation 0.1 270 < th dose dependent rect. 1 7
742 63.97 wind 1.0 270 > th dose independent rect. 11 1
750 64.01 wind 9.0 10 < th dose independent rect. 16 17
776 64.16 wind 1.0 270 > th dose independent rect. 8 17
798 64.24 humidity 90.0 270 < th dose independent rect. 14 4
805 64.27 atmosphere 1015.0 10 < th dose independent rect. 20 20
817 64.30 atmosphere 995.0 10 > th dose independent rect. 16 17
820 64.31 wind 9.0 10 < th dose independent rect. 16 19
845 64.35 temperature 10.0 270 > th dose independent rect. 11 1
846 64.35 atmosphere 995.0 270 > th dose independent rect. 11 1
847 64.35 atmosphere 1015.0 270 < th dose independent rect. 11 1
848 64.35 precipitation 0.1 270 < th dose independent rect. 11 1
851 64.35 temperature 10.0 270 > th dose independent rect. 12 23
852 64.35 precipitation 0.1 270 < th dose dependent rect. 11 1
871 64.40 radiation 1.0 270 > th dose independent rect. 11 1
879 64.42 atmosphere 995.0 10 > th dose independent rect. 16 19
889 64.46 wind 9.0 270 < th dose independent rect. 8 17
901 64.50 wind 9.0 10 < th dose independent rect. 11 5
904 64.51 temperature 10.0 1440 > th dose independent rect. 10 7
908 64.51 temperature 10.0 1440 > th dose independent rect. 17 17
928 64.58 atmosphere 995.0 10 > th dose independent rect. 20 20
935 64.60 temperature 10.0 270 > th dose dependent rect. 1 8
965 64.66 atmosphere 995.0 270 > th dose independent rect. 8 17
973 64.69 precipitation 0.1 10 < th dose independent rect. 16 19
976 64.69 precipitation 0.1 10 < th dose dependent rect. 16 19
980 64.70 atmosphere 995.0 10 > th dose dependent rect. 11 5
997 64.76 temperature 10.0 10 > th dose independent rect. 16 4
999 64.76 atmosphere 1010.0 10 < th dose independent rect. 16 4