Os12g0637100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Purple acid phosphatase (EC 3.1.3.2).
FiT-DB / Search/ Help/ Sample detail
|
Os12g0637100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Purple acid phosphatase (EC 3.1.3.2).
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 67.76 | 0.387 | 11.1 | -0.0107 | 2.38 | 1.17 | -0.0754 | -2.46 | 0.082 | 23 | 23.7 | 427 | 22.2 | -- |
| 75.44 | 0.405 | 11.2 | -0.428 | 2.38 | 1.18 | 1.62 | -- | -0.0261 | 23 | 23.6 | 451 | 22.6 | -- |
| 67.26 | 0.382 | 11.1 | 0.0175 | 2.39 | 1.17 | -- | -2.45 | 0.083 | 23 | 23.66 | 475 | 22.6 | -- |
| 86.51 | 0.433 | 11.2 | -0.529 | 2.36 | 1.2 | -- | -- | -0.0343 | 23 | 23.64 | 413 | 22.1 | -- |
| 136.36 | 0.544 | 11.3 | 0.0443 | -- | -1.76 | -- | -1.98 | -0.389 | -- | 47.6 | 7550 | 21.8 | -- |
| 108.42 | 0.488 | 11.2 | -0.726 | 1.86 | -- | 1.87 | -- | -0.368 | 23.2 | -- | -- | -- | -- |
| 123.4 | 0.52 | 11.3 | -0.801 | 1.86 | -- | -- | -- | -0.375 | 23.1 | -- | -- | -- | -- |
| 123.4 | 0.517 | 11.2 | -0.801 | -- | -1.86 | -- | -- | -0.374 | -- | 54.99 | 9013 | 22 | -- |
| 93.49 | 0.45 | 11.2 | -- | 2.35 | 1.27 | -- | -- | 0.00208 | 22.9 | 23.7 | 413 | 22 | -- |
| 338.14 | 0.859 | 11.2 | -0.758 | -- | -- | -- | -- | -0.359 | -- | -- | -- | -- | -- |
| 140.31 | 0.554 | 11.2 | -- | 1.85 | -- | -- | -- | -0.285 | 23.1 | -- | -- | -- | -- |
| 140.31 | 0.552 | 11.2 | -- | -- | -1.85 | -- | -- | -0.285 | -- | 59.69 | 47520 | 18.9 | -- |
| 353.28 | 0.877 | 11.2 | -- | -- | -- | -- | -- | -0.275 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 69.02 | temperature | 20 | 720 | > th | dose dependent | rect. | 24 | 9 |
| 3 | 69.35 | temperature | 20 | 720 | > th | dose dependent | rect. | 1 | 7 |
| 39 | 76.57 | temperature | 25 | 720 | < th | dose dependent | rect. | 1 | 6 |
| 50 | 77.08 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 2 |
| 76 | 78.24 | temperature | 25 | 270 | < th | dose independent | rect. | 6 | 7 |
| 77 | 78.25 | temperature | 20 | 720 | > th | dose dependent | sin | 8 | NA |
| 78 | 78.29 | temperature | 20 | 270 | > th | dose dependent | sin | 5 | NA |
| 233 | 82.57 | temperature | 10 | 270 | > th | dose dependent | sin | 4 | NA |
| 241 | 82.76 | temperature | 20 | 720 | > th | dose independent | rect. | 3 | 4 |
| 247 | 82.88 | temperature | 20 | 720 | > th | dose independent | rect. | 4 | 2 |
| 250 | 82.90 | temperature | 25 | 270 | < th | dose independent | sin | 2 | NA |
| 254 | 83.04 | temperature | 25 | 270 | > th | dose independent | rect. | 2 | 9 |
| 259 | 83.13 | temperature | 20 | 720 | < th | dose independent | rect. | 3 | 4 |
| 264 | 83.17 | temperature | 25 | 720 | < th | dose dependent | sin | 7 | NA |
| 293 | 83.53 | temperature | 30 | 270 | < th | dose dependent | sin | 3 | NA |
| 341 | 84.18 | temperature | 30 | 270 | < th | dose dependent | rect. | 5 | 10 |
| 346 | 84.24 | temperature | 25 | 270 | > th | dose independent | sin | 4 | NA |
| 363 | 84.37 | temperature | 30 | 30 | < th | dose dependent | sin | 1 | NA |
| 399 | 84.78 | temperature | 30 | 30 | < th | dose dependent | rect. | 7 | 10 |
| 402 | 84.80 | temperature | 20 | 30 | > th | dose dependent | rect. | 4 | 14 |
| 437 | 85.09 | temperature | 20 | 10 | > th | dose dependent | rect. | 4 | 16 |
| 486 | 85.51 | temperature | 25 | 270 | < th | dose dependent | rect. | 7 | 1 |
| 536 | 85.81 | temperature | 25 | 270 | > th | dose independent | rect. | 3 | 13 |
| 551 | 85.91 | temperature | 25 | 90 | > th | dose independent | rect. | 3 | 15 |
| 707 | 86.76 | temperature | 25 | 10 | > th | dose dependent | rect. | 21 | 23 |