Os12g0635500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF266, plant family protein.
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Os12g0635500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF266, plant family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 83.52 | 0.429 | 10.7 | 2.87 | 0.0257 | 1.06 | -1.04 | 1.16 | 0.753 | 4 | 30.88 | 20 | -- | -- |
| 84.91 | 0.429 | 10.7 | 3.07 | 0.00855 | 1.25 | -0.783 | -- | 0.787 | 4.96 | 43.29 | 25 | -- | -- |
| 85.52 | 0.431 | 10.7 | 2.99 | 0.124 | 0.99 | -- | 0.369 | 0.775 | 23.3 | 31.15 | 60 | -- | -- |
| 85.63 | 0.431 | 10.7 | 3.05 | 0.115 | 0.979 | -- | -- | 0.782 | 23.7 | 31.17 | 57 | -- | -- |
| 85.99 | 0.432 | 10.7 | 3.01 | -- | 1.06 | -- | 0.383 | 0.792 | -- | 30.8 | 49 | -- | -- |
| 97.77 | 0.464 | 10.7 | 2.82 | 0.399 | -- | -0.28 | -- | 0.615 | 2.14 | -- | -- | -- | -- |
| 98.05 | 0.464 | 10.7 | 2.83 | 0.398 | -- | -- | -- | 0.617 | 1.98 | -- | -- | -- | -- |
| 86.18 | 0.432 | 10.7 | 3.08 | -- | 1.07 | -- | -- | 0.809 | -- | 30.99 | 41 | -- | -- |
| 201.61 | 0.661 | 10.8 | -- | 0.631 | -2.14 | -- | -- | 0.19 | 6.56 | 21.36 | 47063 | -- | -- |
| 107.58 | 0.485 | 10.7 | 2.84 | -- | -- | -- | -- | 0.626 | -- | -- | -- | -- | -- |
| 308.47 | 0.822 | 10.8 | -- | 0.451 | -- | -- | -- | 0.302 | 2.13 | -- | -- | -- | -- |
| 175.87 | 0.618 | 10.9 | -- | -- | -1.97 | -- | -- | -0.184 | -- | 22.73 | 47520 | -- | -- |
| 320.63 | 0.836 | 10.8 | -- | -- | -- | -- | -- | 0.311 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 78.82 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 2 | 78.84 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 14 |
| 3 | 78.85 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 18 | 3 |
| 8 | 79.10 | wind | 7.0 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 9 | 79.13 | wind | 7.0 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 11 | 79.29 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 13 | 79.39 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 11 |
| 15 | 79.42 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 4 |
| 18 | 79.49 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 8 |
| 29 | 79.65 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 6 |
| 39 | 79.84 | wind | 9.0 | 43200 | > th | dose independent | rect. | 17 | 15 |
| 45 | 79.91 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 12 |
| 63 | 80.24 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 64 | 80.24 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 67 | 80.29 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 82 | 80.74 | wind | 9.0 | 43200 | > th | dose dependent | sin | 13 | NA |
| 117 | 81.27 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 13 | 5 |
| 143 | 81.60 | wind | 9.0 | 43200 | > th | dose independent | sin | 12 | NA |
| 146 | 81.64 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 19 | 8 |
| 155 | 81.79 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 13 | 5 |
| 159 | 81.81 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 12 | 6 |
| 160 | 81.81 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 12 | 6 |
| 180 | 81.93 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 23 | 1 |
| 187 | 82.02 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 11 | 22 |
| 199 | 82.16 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 202 | 82.17 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 15 | 23 |
| 203 | 82.21 | wind | 9.0 | 43200 | < th | dose independent | sin | 12 | NA |
| 211 | 82.27 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 212 | 82.29 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 219 | 82.33 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 220 | 82.35 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 16 | 22 |
| 240 | 82.51 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 22 | 5 |
| 263 | 82.61 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 270 | 82.64 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 14 | 20 |
| 279 | 82.69 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 17 | 17 |
| 296 | 82.80 | atmosphere | 1000.0 | 43200 | < th | dose dependent | rect. | 2 | 6 |
| 313 | 82.86 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 314 | 82.86 | atmosphere | 1000.0 | 43200 | < th | dose dependent | rect. | 4 | 3 |
| 336 | 82.91 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 12 | 22 |
| 346 | 82.93 | atmosphere | 1000.0 | 43200 | < th | dose dependent | rect. | 2 | 1 |
| 359 | 82.94 | wind | 5.0 | 43200 | > th | dose independent | rect. | 15 | 17 |
| 382 | 82.98 | wind | 7.0 | 43200 | > th | dose independent | rect. | 14 | 20 |
| 397 | 83.00 | atmosphere | 1000.0 | 43200 | < th | dose dependent | sin | 9 | NA |
| 412 | 83.03 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 23 | 1 |
| 413 | 83.03 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 431 | 83.05 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 470 | 83.08 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 13 | 3 |
| 478 | 83.09 | wind | 5.0 | 43200 | < th | dose independent | rect. | 15 | 17 |
| 493 | 83.11 | humidity | 50.0 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 521 | 83.12 | wind | 7.0 | 43200 | < th | dose independent | rect. | 14 | 20 |
| 554 | 83.16 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 555 | 83.16 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 566 | 83.16 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 599 | 83.19 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 610 | 83.19 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 22 | 15 |
| 614 | 83.19 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 14 | 1 |
| 627 | 83.20 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 23 | 14 |
| 633 | 83.20 | atmosphere | 1000.0 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 641 | 83.20 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 718 | 83.24 | atmosphere | 1000.0 | 43200 | < th | dose independent | sin | 7 | NA |
| 757 | 83.25 | atmosphere | 1000.0 | 43200 | > th | dose independent | sin | 7 | NA |
| 760 | 83.25 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 776 | 83.25 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 22 | 8 |
| 782 | 83.25 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 20 | 10 |
| 810 | 83.25 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 5 | 16 |
| 818 | 83.26 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 820 | 83.26 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 19 | 2 |