Os12g0634600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os12g0634600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 87.28 | 0.439 | 8.54 | 1.06 | 1.83 | 0.755 | 0.371 | -0.218 | 0.284 | 17.9 | 24.7 | 10 | -- | -- |
| 87.49 | 0.436 | 8.55 | 1.07 | 1.83 | 0.767 | 0.37 | -- | 0.284 | 17.9 | 23.69 | 9 | -- | -- |
| 87.61 | 0.436 | 8.54 | 1.06 | 1.83 | 0.754 | -- | -0.202 | 0.286 | 17.9 | 24.19 | 9 | -- | -- |
| 87.81 | 0.436 | 8.54 | 1.07 | 1.83 | 0.748 | -- | -- | 0.286 | 17.9 | 24.1 | 9 | -- | -- |
| 250.85 | 0.742 | 8.51 | 0.992 | -- | 0.704 | -- | -0.0528 | 0.261 | -- | 6.864 | 6 | -- | -- |
| 97.86 | 0.464 | 8.56 | 1.04 | 1.96 | -- | 0.224 | -- | 0.276 | 19.4 | -- | -- | -- | -- |
| 98 | 0.464 | 8.56 | 1.04 | 1.96 | -- | -- | -- | 0.277 | 19.4 | -- | -- | -- | -- |
| 249.66 | 0.736 | 8.51 | 0.986 | -- | 0.726 | -- | -- | 0.272 | -- | 6.706 | 2 | -- | -- |
| 117.69 | 0.505 | 8.57 | -- | 1.82 | 0.725 | -- | -- | 0.158 | 18 | 22.58 | 8 | -- | -- |
| 301.73 | 0.812 | 8.51 | 1.01 | -- | -- | -- | -- | 0.245 | -- | -- | -- | -- | -- |
| 126.45 | 0.526 | 8.59 | -- | 1.95 | -- | -- | -- | 0.161 | 19.4 | -- | -- | -- | -- |
| 275.63 | 0.773 | 8.53 | -- | -- | 0.728 | -- | -- | 0.152 | -- | 7.154 | 2 | -- | -- |
| 328.47 | 0.846 | 8.54 | -- | -- | -- | -- | -- | 0.133 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 83.66 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 2 | 83.89 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 3 | 83.89 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 5 | 84.37 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 6 | 84.43 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 6 | 11 |
| 7 | 84.50 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 6 | 11 |
| 8 | 84.53 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 13 | 4 |
| 9 | 84.53 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 13 | 4 |
| 10 | 84.55 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 13 | 4 |
| 12 | 84.60 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 6 | 11 |
| 13 | 84.60 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 6 | 11 |
| 14 | 84.62 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 4 | 13 |
| 18 | 84.64 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 13 |
| 20 | 84.64 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 13 |
| 24 | 84.70 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 6 | 11 |
| 29 | 84.78 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 4 | 13 |
| 30 | 84.79 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 9 | 8 |
| 32 | 84.83 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 13 | 4 |
| 34 | 84.87 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 9 | 8 |
| 35 | 84.87 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 9 | 8 |
| 44 | 84.97 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 9 | 8 |
| 55 | 85.06 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 71 | 85.22 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 2 | 1 |
| 78 | 85.43 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 80 | 85.43 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 85 | 85.48 | wind | 1.0 | 14400 | > th | dose independent | rect. | 19 | 11 |
| 87 | 85.49 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 88 | 85.49 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 15 | 1 |
| 99 | 85.69 | wind | 1.0 | 14400 | > th | dose independent | rect. | 21 | 9 |
| 107 | 85.80 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 24 | 3 |
| 113 | 85.83 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 23 | 17 |
| 114 | 85.83 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 23 | 17 |
| 115 | 85.83 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 23 | 17 |
| 117 | 85.87 | wind | 1.0 | 14400 | < th | dose independent | rect. | 19 | 11 |
| 119 | 85.88 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 4 | 10 |
| 122 | 85.90 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 9 | 5 |
| 131 | 85.92 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 10 |
| 134 | 85.92 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 10 |
| 175 | 86.07 | radiation | 30.0 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 180 | 86.10 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 7 | 13 |
| 187 | 86.14 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 188 | 86.14 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 9 | 5 |
| 190 | 86.14 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 9 | 5 |
| 205 | 86.22 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 220 | 86.28 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 8 | 2 |
| 221 | 86.29 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 4 |
| 223 | 86.29 | radiation | 10.0 | 10 | > th | dose independent | rect. | 9 | 23 |
| 231 | 86.32 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 6 | 13 |
| 235 | 86.33 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 1 |
| 236 | 86.33 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 24 | 1 |
| 274 | 86.48 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 10 | 1 |
| 294 | 86.54 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 8 | 7 |
| 296 | 86.55 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 302 | 86.56 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 10 | 1 |
| 313 | 86.58 | radiation | 40.0 | 4320 | > th | dose independent | rect. | 15 | 17 |
| 343 | 86.64 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 20 | 10 |
| 344 | 86.65 | precipitation | 0.1 | 4320 | > th | dose independent | sin | 2 | NA |
| 347 | 86.66 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 5 | 3 |
| 353 | 86.69 | precipitation | 0.1 | 4320 | < th | dose independent | sin | 2 | NA |
| 355 | 86.69 | precipitation | 0.1 | 4320 | < th | dose dependent | sin | 2 | NA |
| 373 | 86.72 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 394 | 86.77 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 5 | 3 |
| 397 | 86.77 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 5 | 3 |
| 403 | 86.78 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 2 |
| 414 | 86.80 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 10 | 3 |
| 420 | 86.82 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 5 | 3 |
| 423 | 86.82 | radiation | 30.0 | 10 | < th | dose dependent | rect. | 12 | 22 |
| 456 | 86.89 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 5 | 6 |
| 458 | 86.89 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 6 | 13 |
| 462 | 86.89 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 5 | 6 |
| 476 | 86.92 | wind | 1.0 | 14400 | > th | dose independent | rect. | 4 | 2 |
| 489 | 86.96 | radiation | 40.0 | 4320 | > th | dose independent | rect. | 15 | 1 |
| 513 | 86.98 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 4 |
| 530 | 87.01 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 6 | 23 |
| 537 | 87.03 | wind | 1.0 | 14400 | < th | dose independent | rect. | 4 | 2 |
| 552 | 87.07 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 561 | 87.09 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 2 |
| 562 | 87.09 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 2 |
| 564 | 87.09 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 2 |
| 580 | 87.12 | wind | 3.0 | 14400 | > th | dose independent | rect. | 22 | 6 |
| 592 | 87.14 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 12 | 8 |
| 610 | 87.16 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 7 |
| 613 | 87.16 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 7 |
| 665 | 87.29 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 6 |
| 668 | 87.29 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 6 |
| 674 | 87.30 | radiation | 20.0 | 10 | < th | dose independent | rect. | 6 | 13 |
| 682 | 87.32 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 685 | 87.33 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 6 | 10 |
| 688 | 87.34 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 6 | 10 |
| 689 | 87.34 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 11 |
| 691 | 87.34 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 15 | 2 |
| 699 | 87.36 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 13 |
| 713 | 87.38 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 11 |
| 717 | 87.38 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 11 |
| 727 | 87.39 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 19 | 22 |
| 729 | 87.40 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 13 |
| 732 | 87.40 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 13 |
| 749 | 87.44 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 754 | 87.44 | precipitation | 0.1 | 4320 | > th | dose dependent | sin | 4 | NA |
| 756 | 87.44 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 13 | 6 |
| 771 | 87.46 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 14 | 3 |
| 775 | 87.46 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 2 | 15 |
| 788 | 87.48 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 13 | 8 |
| 856 | 87.54 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 19 | 22 |
| 862 | 87.55 | radiation | 20.0 | 10 | < th | dose independent | rect. | 6 | 23 |
| 876 | 87.56 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 7 |
| 894 | 87.59 | radiation | 10.0 | 10 | > th | dose independent | sin | 21 | NA |
| 939 | 87.64 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 960 | 87.65 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 13 | 8 |