Os12g0634400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os12g0634400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 327.04 | 0.85 | 4.37 | 1.18 | 0.372 | 0.644 | -0.303 | -1.33 | 0.586 | 14 | 25.4 | 91 | -- | -- |
| 332.29 | 0.849 | 4.33 | 1.57 | 0.377 | 0.59 | -0.845 | -- | 0.711 | 14.2 | 25.4 | 98 | -- | -- |
| 327.31 | 0.843 | 4.37 | 1.14 | 0.384 | 0.636 | -- | -1.45 | 0.581 | 14.2 | 25.32 | 91 | -- | -- |
| 334.81 | 0.852 | 4.33 | 1.55 | 0.394 | 0.563 | -- | -- | 0.718 | 14.4 | 25.4 | 91 | -- | -- |
| 333.55 | 0.851 | 4.38 | 1.16 | -- | 0.788 | -- | -1.33 | 0.525 | -- | 25.4 | 91 | -- | -- |
| 352.23 | 0.88 | 4.27 | 1.72 | 0.811 | -- | -0.58 | -- | 0.974 | 15 | -- | -- | -- | -- |
| 353.34 | 0.88 | 4.28 | 1.71 | 0.81 | -- | -- | -- | 0.971 | 15.1 | -- | -- | -- | -- |
| 340.32 | 0.859 | 4.37 | 1.5 | -- | 0.779 | -- | -- | 0.555 | -- | 24.9 | 45 | -- | -- |
| 393.13 | 0.923 | 4.4 | -- | 0.276 | 0.789 | -- | -- | 0.374 | 15 | 24.8 | 52 | -- | -- |
| 390.8 | 0.924 | 4.28 | 1.67 | -- | -- | -- | -- | 0.95 | -- | -- | -- | -- | -- |
| 430.14 | 0.97 | 4.32 | -- | 0.776 | -- | -- | -- | 0.781 | 15.1 | -- | -- | -- | -- |
| 396.38 | 0.927 | 4.42 | -- | -- | 0.902 | -- | -- | 0.304 | -- | 24.77 | 52 | -- | -- |
| 464.59 | 1.01 | 4.32 | -- | -- | -- | -- | -- | 0.764 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 320.42 | temperature | 25.0 | 90 | > th | dose independent | rect. | 6 | 19 |
| 3 | 321.15 | temperature | 25.0 | 90 | > th | dose independent | rect. | 14 | 22 |
| 4 | 321.54 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 8 | 7 |
| 9 | 321.77 | humidity | 70.0 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 13 | 321.92 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 11 | 2 |
| 16 | 321.98 | humidity | 70.0 | 43200 | < th | dose dependent | rect. | 9 | 3 |
| 26 | 322.23 | humidity | 70.0 | 43200 | < th | dose dependent | rect. | 8 | 5 |
| 28 | 322.25 | humidity | 60.0 | 43200 | < th | dose independent | sin | 4 | NA |
| 34 | 322.35 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 22 | 17 |
| 38 | 322.36 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 19 | 20 |
| 42 | 322.40 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 13 | 11 |
| 51 | 322.44 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 59 | 322.49 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 13 | 4 |
| 89 | 322.72 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 8 | 16 |
| 120 | 322.89 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 9 | 4 |
| 123 | 322.89 | humidity | 70.0 | 43200 | < th | dose dependent | rect. | 17 | 19 |
| 129 | 322.91 | humidity | 70.0 | 43200 | < th | dose dependent | sin | 6 | NA |
| 137 | 322.94 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 138 | 322.94 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 20 | 3 |
| 139 | 322.94 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 8 | 6 |
| 144 | 322.95 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 16 | 23 |
| 204 | 323.09 | humidity | 60.0 | 43200 | < th | dose dependent | sin | 15 | NA |
| 271 | 323.29 | humidity | 60.0 | 43200 | > th | dose independent | sin | 5 | NA |
| 283 | 323.32 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 324 | 323.41 | humidity | 60.0 | 43200 | < th | dose independent | no | NA | NA |
| 349 | 323.45 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 7 | 18 |
| 355 | 323.49 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 14 | 23 |
| 397 | 323.57 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 18 | 4 |
| 494 | 323.96 | radiation | 40.0 | 43200 | > th | dose independent | rect. | 14 | 20 |
| 508 | 324.03 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 22 | 15 |
| 524 | 324.07 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 16 | 22 |
| 539 | 324.11 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 14 | 23 |
| 580 | 324.23 | temperature | 25.0 | 90 | < th | dose independent | rect. | 11 | 22 |
| 592 | 324.28 | radiation | 40.0 | 43200 | > th | dose independent | sin | 13 | NA |
| 637 | 324.42 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 3 |
| 642 | 324.42 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 3 |
| 657 | 324.48 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 678 | 324.54 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 18 | 23 |
| 680 | 324.55 | humidity | 60.0 | 43200 | > th | dose independent | no | NA | NA |
| 707 | 324.66 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 12 | 8 |
| 718 | 324.73 | wind | 5.0 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 720 | 324.74 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 3 |
| 724 | 324.75 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 3 |
| 728 | 324.77 | humidity | 70.0 | 43200 | < th | dose dependent | rect. | 8 | 12 |
| 729 | 324.78 | radiation | 40.0 | 43200 | > th | dose independent | rect. | 12 | 4 |
| 760 | 324.85 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 768 | 324.86 | humidity | 50.0 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 783 | 324.93 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 20 | 2 |
| 801 | 325.01 | temperature | 25.0 | 90 | < th | dose independent | rect. | 12 | 9 |
| 812 | 325.04 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 8 | 2 |
| 832 | 325.09 | radiation | 30.0 | 43200 | < th | dose dependent | rect. | 14 | 1 |
| 844 | 325.12 | radiation | 20.0 | 43200 | > th | dose independent | sin | 19 | NA |
| 896 | 325.21 | radiation | 20.0 | 43200 | < th | dose dependent | rect. | 10 | 20 |
| 898 | 325.22 | radiation | 20.0 | 43200 | > th | dose independent | rect. | 11 | 21 |
| 907 | 325.24 | radiation | 20.0 | 43200 | > th | dose independent | rect. | 13 | 2 |
| 910 | 325.24 | temperature | 25.0 | 90 | > th | dose dependent | sin | 10 | NA |
| 925 | 325.28 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 17 | 15 |
| 938 | 325.31 | radiation | 20.0 | 43200 | < th | dose dependent | rect. | 10 | 13 |
| 939 | 325.31 | radiation | 20.0 | 43200 | < th | dose dependent | rect. | 10 | 15 |
| 946 | 325.32 | radiation | 20.0 | 43200 | < th | dose dependent | rect. | 10 | 9 |
| 962 | 325.36 | radiation | 20.0 | 43200 | < th | dose dependent | sin | 20 | NA |
| 964 | 325.37 | radiation | 20.0 | 43200 | > th | dose independent | rect. | 11 | 6 |