Os12g0633200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Erg28-like family protein.
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Os12g0633200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Erg28-like family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 130.55 | 0.537 | 6.19 | 0.334 | 1.14 | 1.03 | -0.292 | 0.0664 | -0.226 | 0.0354 | 19.9 | 2655 | -- | -- |
| 130.56 | 0.532 | 6.19 | 0.326 | 1.14 | 1.02 | -0.285 | -- | -0.227 | 0.0395 | 19.9 | 2650 | -- | -- |
| 130.91 | 0.533 | 6.19 | 0.339 | 1.14 | 1.03 | -- | 0.0356 | -0.227 | 0.0157 | 19.9 | 2648 | -- | -- |
| 130.91 | 0.533 | 6.19 | 0.335 | 1.14 | 1.02 | -- | -- | -0.226 | 0.0153 | 19.88 | 2648 | -- | -- |
| 208.49 | 0.672 | 6.17 | 0.322 | -- | 1.35 | -- | 0.269 | -0.241 | -- | 19.7 | 2375 | -- | -- |
| 150.98 | 0.576 | 6.14 | 0.861 | 1.19 | -- | -0.355 | -- | 0.0192 | 0.147 | -- | -- | -- | -- |
| 151.52 | 0.576 | 6.14 | 0.875 | 1.19 | -- | -- | -- | 0.0211 | 0.108 | -- | -- | -- | -- |
| 208.16 | 0.672 | 6.18 | 0.298 | -- | 1.25 | -- | -- | -0.267 | -- | 20.2 | 2404 | -- | -- |
| 133.01 | 0.537 | 6.21 | -- | 1.16 | 1.2 | -- | -- | -0.286 | 24 | 19.8 | 2745 | -- | -- |
| 240.32 | 0.724 | 6.11 | 0.913 | -- | -- | -- | -- | 0.0384 | -- | -- | -- | -- | -- |
| 171.7 | 0.613 | 6.16 | -- | 1.2 | -- | -- | -- | -0.0764 | 0.149 | -- | -- | -- | -- |
| 209.86 | 0.675 | 6.19 | -- | -- | 1.41 | -- | -- | -0.317 | -- | 19.9 | 2423 | -- | -- |
| 262.3 | 0.756 | 6.14 | -- | -- | -- | -- | -- | -0.0629 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 131.16 | temperature | 20 | 4320 | < th | dose dependent | rect. | 21 | 4 |
| 2 | 131.29 | temperature | 25 | 1440 | < th | dose dependent | rect. | 18 | 10 |
| 5 | 131.31 | temperature | 25 | 1440 | < th | dose dependent | rect. | 13 | 17 |
| 9 | 131.33 | temperature | 20 | 4320 | < th | dose dependent | rect. | 22 | 2 |
| 30 | 131.42 | temperature | 25 | 1440 | < th | dose dependent | sin | 13 | NA |
| 60 | 131.55 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 2 |
| 65 | 131.57 | temperature | 20 | 4320 | < th | dose independent | rect. | 19 | 5 |
| 69 | 131.58 | temperature | 20 | 4320 | < th | dose dependent | rect. | 3 | 2 |
| 81 | 131.62 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 2 |
| 84 | 131.63 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 2 |
| 91 | 131.66 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 2 |
| 100 | 131.69 | temperature | 20 | 1440 | < th | dose independent | rect. | 12 | 18 |
| 104 | 131.70 | temperature | 20 | 1440 | > th | dose independent | rect. | 12 | 18 |
| 153 | 131.80 | temperature | 10 | 1440 | > th | dose dependent | rect. | 23 | 5 |
| 157 | 131.81 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 2 |
| 250 | 131.96 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 18 |
| 297 | 132.04 | temperature | 20 | 1440 | > th | dose independent | rect. | 24 | 16 |
| 317 | 132.07 | temperature | 25 | 1440 | < th | dose dependent | rect. | 19 | 20 |
| 371 | 132.16 | temperature | 20 | 1440 | < th | dose independent | rect. | 24 | 16 |
| 389 | 132.19 | temperature | 20 | 4320 | > th | dose independent | rect. | 19 | 5 |
| 398 | 132.20 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 454 | 132.27 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 2 |
| 498 | 132.31 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 23 |
| 560 | 132.38 | temperature | 15 | 10 | > th | dose dependent | rect. | 12 | 17 |
| 594 | 132.42 | temperature | 15 | 270 | > th | dose dependent | rect. | 9 | 22 |
| 614 | 132.46 | temperature | 20 | 1440 | > th | dose independent | rect. | 18 | 12 |
| 624 | 132.47 | temperature | 20 | 1440 | < th | dose independent | rect. | 18 | 12 |
| 705 | 132.55 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 21 |
| 793 | 132.62 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 23 |
| 811 | 132.64 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 23 |
| 874 | 132.71 | temperature | 20 | 1440 | > th | dose independent | sin | 7 | NA |
| 928 | 132.75 | temperature | 20 | 4320 | < th | dose independent | sin | 15 | NA |
| 975 | 132.78 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 977 | 132.79 | temperature | 20 | 1440 | < th | dose independent | sin | 7 | NA |