Os12g0630600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os12g0630600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 50.64 | 0.334 | 2.84 | -0.0422 | 0.00221 | -0.311 | -0.271 | 1.16 | 0.0672 | 4 | 1.1 | 16 | -- | -- |
| 51.75 | 0.335 | 2.83 | 0.00256 | 0.0127 | -0.228 | -0.398 | -- | 0.0796 | 3.85 | 1 | 16 | -- | -- |
| 50.85 | 0.332 | 2.84 | -0.0435 | 0.00543 | -0.31 | -- | 1.28 | 0.0654 | 4.76 | 1.081 | 16 | -- | -- |
| 52.17 | 0.336 | 2.83 | 0.0071 | 0.0405 | -0.207 | -- | -- | 0.0852 | 6.57 | 1.061 | 16 | -- | -- |
| 50.85 | 0.332 | 2.84 | -0.0423 | -- | -0.314 | -- | 1.26 | 0.0676 | -- | 1.078 | 16 | -- | -- |
| 52.83 | 0.341 | 2.83 | 0.0329 | 0.0819 | -- | -0.367 | -- | 0.0771 | 4.61 | -- | -- | -- | -- |
| 53.16 | 0.341 | 2.83 | 0.0354 | 0.084 | -- | -- | -- | 0.079 | 5.63 | -- | -- | -- | -- |
| 52.21 | 0.337 | 2.83 | 0.00813 | -- | -0.226 | -- | -- | 0.0818 | -- | 1.009 | 16 | -- | -- |
| 52.16 | 0.336 | 2.83 | -- | 0.0396 | -0.21 | -- | -- | 0.0807 | 7.16 | 1.1 | 16 | -- | -- |
| 53.53 | 0.342 | 2.83 | 0.0381 | -- | -- | -- | -- | 0.0811 | -- | -- | -- | -- | -- |
| 53.2 | 0.341 | 2.83 | -- | 0.0846 | -- | -- | -- | 0.0751 | 5.62 | -- | -- | -- | -- |
| 52.21 | 0.337 | 2.83 | -- | -- | -0.227 | -- | -- | 0.0809 | -- | 1.083 | 16 | -- | -- |
| 53.57 | 0.342 | 2.83 | -- | -- | -- | -- | -- | 0.0768 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 43.08 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 2 | 2 |
| 2 | 43.17 | temperature | 25.0 | 90 | > th | dose independent | rect. | 1 | 3 |
| 3 | 43.29 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 1 | 4 |
| 4 | 43.55 | temperature | 25.0 | 270 | > th | dose independent | rect. | 1 | 1 |
| 28 | 46.12 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 29 | 46.13 | wind | 3.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 31 | 46.14 | wind | 3.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 32 | 46.14 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 45 | 46.16 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 47 | 46.16 | temperature | 30.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 48 | 46.16 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 53 | 46.16 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 54 | 46.16 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 56 | 46.16 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 61 | 46.16 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 62 | 46.16 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 63 | 46.16 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 68 | 46.16 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 73 | 46.16 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 77 | 46.19 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 82 | 46.21 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 85 | 46.23 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 92 | 46.26 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 98 | 46.26 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 3 | 23 |
| 100 | 46.26 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 140 | 46.37 | wind | 9.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 143 | 46.43 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 3 | 1 |
| 146 | 46.44 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 147 | 46.44 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 150 | 46.44 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 154 | 46.44 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 163 | 46.44 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 164 | 46.44 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 184 | 46.44 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 187 | 46.44 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 209 | 46.55 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 2 | 3 |
| 238 | 47.37 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 1 | 1 |
| 259 | 47.73 | humidity | 50.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 300 | 48.33 | temperature | 25.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 315 | 48.42 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 324 | 48.54 | temperature | 30.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 328 | 48.57 | humidity | 90.0 | 10 | < th | dose independent | rect. | 4 | 1 |
| 331 | 48.59 | temperature | 20.0 | 10 | > th | dose independent | rect. | 2 | 3 |
| 347 | 48.70 | wind | 1.0 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 353 | 48.76 | wind | 3.0 | 30 | < th | dose dependent | rect. | 2 | 3 |
| 354 | 48.77 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 361 | 48.82 | wind | 1.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 369 | 48.85 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 2 | 3 |
| 428 | 49.06 | wind | 1.0 | 10 | > th | dose independent | rect. | 5 | 23 |
| 441 | 49.20 | humidity | 90.0 | 270 | < th | dose independent | rect. | 1 | 1 |
| 460 | 49.28 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 498 | 49.51 | wind | 1.0 | 10 | < th | dose independent | rect. | 15 | 12 |
| 569 | 49.75 | wind | 9.0 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 660 | 50.02 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 3 |
| 663 | 50.02 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 3 |
| 679 | 50.05 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 5 | 21 |
| 686 | 50.06 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 688 | 50.06 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 3 |
| 690 | 50.06 | temperature | 30.0 | 30 | < th | dose independent | rect. | 2 | 3 |
| 691 | 50.06 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 3 |
| 695 | 50.06 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 3 |
| 697 | 50.06 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 3 |
| 703 | 50.06 | wind | 9.0 | 30 | < th | dose independent | rect. | 5 | 21 |
| 704 | 50.06 | temperature | 10.0 | 30 | > th | dose independent | rect. | 5 | 21 |
| 710 | 50.07 | wind | 3.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 718 | 50.07 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 5 | 21 |
| 720 | 50.07 | radiation | 10.0 | 30 | < th | dose dependent | rect. | 2 | 3 |
| 729 | 50.07 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 5 | 21 |
| 731 | 50.08 | wind | 7.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 733 | 50.08 | temperature | 10.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 735 | 50.08 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 739 | 50.08 | temperature | 30.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 740 | 50.08 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 744 | 50.08 | humidity | 50.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 748 | 50.08 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 757 | 50.08 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 759 | 50.08 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 760 | 50.08 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 762 | 50.08 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 763 | 50.08 | radiation | 1.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 768 | 50.08 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 777 | 50.08 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 4 | 1 |
| 782 | 50.08 | temperature | 10.0 | 30 | > th | dose independent | rect. | 5 | 23 |
| 783 | 50.08 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 6 | 23 |
| 787 | 50.08 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 792 | 50.08 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 800 | 50.09 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 843 | 50.14 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 849 | 50.15 | wind | 9.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 871 | 50.19 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 875 | 50.20 | wind | 1.0 | 10 | > th | dose independent | sin | 16 | NA |
| 882 | 50.20 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 898 | 50.21 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 3 |
| 899 | 50.21 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 3 |
| 902 | 50.21 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 3 |
| 906 | 50.21 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 3 |
| 915 | 50.21 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 3 |
| 916 | 50.21 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 3 | 3 |
| 927 | 50.21 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 6 | 21 |
| 945 | 50.22 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 968 | 50.27 | wind | 9.0 | 30 | < th | dose independent | rect. | 5 | 23 |
| 975 | 50.28 | wind | 1.0 | 30 | > th | dose independent | rect. | 3 | 23 |