Os12g0626200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Auxin responsive SAUR protein family protein.
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Os12g0626200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Auxin responsive SAUR protein family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 553.33 | 1.11 | 5.45 | -3.93 | 1.3 | 5.41 | -5.38 | -1.55 | -1.16 | 18.6 | 16.71 | 287 | 7.13 | -- |
| 555.03 | 1.1 | 5.43 | -3.69 | 1.23 | 5.27 | -5.42 | -- | -1.1 | 18.9 | 16.84 | 288 | 7.18 | -- |
| 620.29 | 1.16 | 5.5 | -4.07 | 1.76 | 4.88 | -- | -2.9 | -1.24 | 19.8 | 18 | 362 | 7.19 | -- |
| 627.89 | 1.17 | 5.45 | -3.58 | 1.78 | 4.75 | -- | -- | -1.12 | 19.9 | 17.9 | 364 | 7.18 | -- |
| 617.66 | 1.16 | 5.45 | -4.34 | -- | 6.21 | -- | -4.81 | -1.15 | -- | 16.76 | 508 | 10.1 | -- |
| 936.34 | 1.43 | 5.33 | -2.81 | 3.54 | -- | -1.25 | -- | -0.391 | 22.7 | -- | -- | -- | -- |
| 942.58 | 1.44 | 5.32 | -2.76 | 3.54 | -- | -- | -- | -0.389 | 22.8 | -- | -- | -- | -- |
| 649.03 | 1.19 | 5.37 | -3.67 | -- | 6.08 | -- | -- | -0.981 | -- | 16.11 | 511 | 10.1 | -- |
| 947.57 | 1.43 | 5.35 | -- | 2.11 | 3.59 | -- | -- | -0.47 | 21.5 | 20.09 | 459 | 7.9 | -- |
| 1718.49 | 1.94 | 5.23 | -2.69 | -- | -- | -- | -- | -0.367 | -- | -- | -- | -- | -- |
| 1143.2 | 1.58 | 5.26 | -- | 3.52 | -- | -- | -- | -0.0818 | 22.7 | -- | -- | -- | -- |
| 978.33 | 1.46 | 5.26 | -- | -- | 4.87 | -- | -- | -0.485 | -- | 12.76 | 225 | 8.04 | -- |
| 1908.91 | 2.04 | 5.17 | -- | -- | -- | -- | -- | -0.0693 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 559.04 | temperature | 15 | 270 | > th | dose dependent | sin | 13 | NA |
| 2 | 559.77 | temperature | 15 | 720 | > th | dose dependent | rect. | 15 | 9 |
| 3 | 561.58 | temperature | 20 | 720 | > th | dose dependent | rect. | 15 | 7 |
| 38 | 576.66 | temperature | 15 | 720 | > th | dose dependent | sin | 18 | NA |
| 87 | 589.20 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 8 |
| 158 | 602.67 | temperature | 30 | 270 | < th | dose dependent | sin | 13 | NA |
| 202 | 609.61 | temperature | 25 | 270 | < th | dose dependent | rect. | 14 | 15 |
| 286 | 618.48 | temperature | 30 | 720 | < th | dose dependent | sin | 17 | NA |
| 351 | 624.82 | temperature | 25 | 720 | > th | dose independent | rect. | 14 | 8 |
| 405 | 630.00 | temperature | 25 | 720 | < th | dose independent | rect. | 14 | 9 |
| 474 | 635.02 | temperature | 25 | 10 | < th | dose dependent | rect. | 15 | 17 |
| 634 | 643.02 | temperature | 25 | 720 | > th | dose independent | rect. | 15 | 5 |
| 668 | 644.61 | temperature | 25 | 10 | < th | dose dependent | rect. | 12 | 20 |
| 669 | 644.64 | temperature | 25 | 10 | < th | dose dependent | rect. | 12 | 22 |
| 763 | 649.28 | temperature | 25 | 720 | < th | dose independent | sin | 17 | NA |
| 921 | 659.18 | temperature | 25 | 720 | > th | dose independent | sin | 17 | NA |