Os12g0626100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Armadillo-like helical domain containing protein.
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Os12g0626100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Armadillo-like helical domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 61.43 | 0.368 | 10 | -0.695 | 0.616 | -1.5 | 0.406 | -1.02 | -0.143 | 2.29 | 26.13 | 221 | -- | -- |
| 62.82 | 0.369 | 10 | -0.836 | 0.651 | -1.44 | 0.318 | -- | -0.19 | 2.31 | 26.83 | 216 | -- | -- |
| 61.92 | 0.366 | 10 | -0.743 | 0.599 | -1.47 | -- | -0.779 | -0.151 | 2.21 | 25.98 | 226 | -- | -- |
| 62.73 | 0.369 | 10 | -0.872 | 0.617 | -1.42 | -- | -- | -0.183 | 2.31 | 26.41 | 225 | -- | -- |
| 72.2 | 0.396 | 10 | -0.778 | -- | -1.42 | -- | -0.793 | -0.164 | -- | 25.92 | 979 | -- | -- |
| 92.18 | 0.45 | 9.96 | -0.504 | 0.35 | -- | 0.0675 | -- | 0.131 | 0.878 | -- | -- | -- | -- |
| 92.2 | 0.45 | 9.96 | -0.507 | 0.35 | -- | -- | -- | 0.13 | 0.867 | -- | -- | -- | -- |
| 73.24 | 0.399 | 10 | -0.884 | -- | -1.3 | -- | -- | -0.166 | -- | 26.3 | 989 | -- | -- |
| 80.76 | 0.419 | 10 | -- | 0.528 | -1.06 | -- | -- | -0.0125 | 1.84 | 26.07 | 191 | -- | -- |
| 99.84 | 0.467 | 9.96 | -0.494 | -- | -- | -- | -- | 0.137 | -- | -- | -- | -- | -- |
| 98.97 | 0.465 | 9.95 | -- | 0.342 | -- | -- | -- | 0.187 | 0.802 | -- | -- | -- | -- |
| 90.88 | 0.444 | 9.99 | -- | -- | -0.915 | -- | -- | 0.0165 | -- | 26.3 | 910 | -- | -- |
| 106.28 | 0.481 | 9.95 | -- | -- | -- | -- | -- | 0.192 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 58.34 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 3 | 59.20 | temperature | 15 | 10 | > th | dose dependent | rect. | 9 | 20 |
| 8 | 60.90 | temperature | 30 | 270 | < th | dose dependent | rect. | 13 | 20 |
| 10 | 61.10 | temperature | 30 | 270 | < th | dose dependent | rect. | 11 | 21 |
| 13 | 61.17 | temperature | 10 | 270 | > th | dose dependent | sin | 9 | NA |
| 24 | 61.53 | temperature | 30 | 270 | < th | dose dependent | sin | 9 | NA |
| 46 | 61.94 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 22 |
| 47 | 61.95 | temperature | 25 | 270 | < th | dose dependent | rect. | 24 | 23 |
| 50 | 62.01 | temperature | 20 | 270 | > th | dose dependent | rect. | 19 | 17 |
| 60 | 62.21 | temperature | 25 | 270 | < th | dose dependent | rect. | 21 | 23 |
| 76 | 62.46 | temperature | 25 | 270 | < th | dose dependent | no | NA | NA |
| 87 | 62.62 | temperature | 25 | 270 | < th | dose dependent | rect. | 15 | 23 |
| 154 | 63.52 | temperature | 20 | 270 | > th | dose independent | rect. | 6 | 22 |
| 305 | 65.09 | temperature | 20 | 270 | > th | dose independent | rect. | 17 | 22 |
| 349 | 65.42 | temperature | 20 | 90 | > th | dose independent | rect. | 9 | 20 |
| 355 | 65.44 | temperature | 20 | 10 | > th | dose independent | rect. | 9 | 20 |
| 395 | 65.65 | temperature | 15 | 270 | > th | dose dependent | rect. | 18 | 10 |
| 483 | 66.14 | temperature | 30 | 270 | < th | dose dependent | rect. | 21 | 12 |
| 564 | 66.65 | temperature | 10 | 10 | > th | dose dependent | no | NA | NA |
| 565 | 66.65 | temperature | 25 | 720 | < th | dose dependent | rect. | 5 | 19 |
| 587 | 66.72 | temperature | 20 | 270 | > th | dose independent | rect. | 21 | 15 |
| 690 | 67.23 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 701 | 67.29 | temperature | 20 | 1440 | > th | dose independent | rect. | 18 | 13 |
| 719 | 67.35 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 7 |
| 760 | 67.49 | temperature | 20 | 1440 | > th | dose independent | rect. | 10 | 21 |
| 854 | 67.78 | temperature | 20 | 1440 | < th | dose independent | rect. | 18 | 13 |
| 856 | 67.79 | temperature | 20 | 1440 | > th | dose independent | sin | 10 | NA |
| 881 | 67.84 | temperature | 20 | 1440 | > th | dose independent | rect. | 18 | 18 |
| 900 | 67.88 | temperature | 20 | 1440 | > th | dose independent | rect. | 20 | 16 |
| 925 | 67.94 | temperature | 20 | 90 | > th | dose independent | rect. | 19 | 10 |
| 953 | 67.99 | temperature | 25 | 1440 | < th | dose dependent | sin | 15 | NA |
| 980 | 68.03 | temperature | 20 | 10 | > th | dose dependent | rect. | 20 | 20 |
| 981 | 68.04 | temperature | 20 | 1440 | < th | dose independent | rect. | 9 | 22 |