Os12g0623400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os12g0623400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 90.83 | 0.448 | 3.19 | -0.539 | 0.166 | 0.956 | -0.146 | -8.53 | -0.0215 | 8.83 | 30.41 | 11 | -- | -- |
| 97.41 | 0.463 | 3.13 | 0.00589 | 0.175 | 0.699 | -0.187 | -- | -0.0322 | 9.2 | 34.58 | 62 | -- | -- |
| 90.82 | 0.447 | 3.18 | -0.52 | 0.165 | 0.975 | -- | -8.63 | -0.0219 | 8.92 | 30.7 | 11 | -- | -- |
| 97.54 | 0.463 | 3.13 | -0.000709 | 0.176 | 0.694 | -- | -- | -0.0324 | 9.22 | 34.78 | 8 | -- | -- |
| 92.38 | 0.448 | 3.19 | -0.538 | -- | 0.977 | -- | -8.72 | -0.0212 | -- | 30.74 | 14 | -- | -- |
| 97.9 | 0.464 | 3.13 | 0.00965 | 0.176 | -- | -0.181 | -- | -0.0336 | 9.3 | -- | -- | -- | -- |
| 98.02 | 0.464 | 3.13 | 0.00318 | 0.177 | -- | -- | -- | -0.0338 | 9.34 | -- | -- | -- | -- |
| 99.33 | 0.466 | 3.14 | -0.00148 | -- | 0.717 | -- | -- | -0.0315 | -- | 34.82 | 8 | -- | -- |
| 97.54 | 0.462 | 3.13 | -- | 0.176 | 0.694 | -- | -- | -0.0323 | 9.22 | 34.78 | 8 | -- | -- |
| 99.85 | 0.467 | 3.14 | 0.00229 | -- | -- | -- | -- | -0.0331 | -- | -- | -- | -- | -- |
| 98.02 | 0.463 | 3.13 | -- | 0.177 | -- | -- | -- | -0.0341 | 9.34 | -- | -- | -- | -- |
| 99.33 | 0.466 | 3.14 | -- | -- | 0.717 | -- | -- | -0.0313 | -- | 34.74 | 8 | -- | -- |
| 99.85 | 0.466 | 3.14 | -- | -- | -- | -- | -- | -0.0334 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 89.84 | temperature | 30 | 10 | > th | dose dependent | rect. | 11 | 1 |
| 5 | 90.11 | temperature | 30 | 10 | > th | dose independent | rect. | 11 | 1 |
| 40 | 90.43 | temperature | 30 | 90 | > th | dose independent | rect. | 11 | 1 |
| 123 | 91.42 | temperature | 30 | 10 | > th | dose dependent | sin | 8 | NA |
| 171 | 92.22 | temperature | 30 | 30 | > th | dose independent | sin | 7 | NA |
| 265 | 93.07 | humidity | 90 | 720 | < th | dose independent | rect. | 4 | 1 |
| 320 | 93.57 | temperature | 30 | 30 | < th | dose independent | sin | 5 | NA |
| 329 | 93.72 | humidity | 90 | 720 | < th | dose dependent | rect. | 4 | 1 |
| 505 | 94.39 | humidity | 90 | 4320 | > th | dose independent | rect. | 4 | 1 |
| 547 | 94.47 | temperature | 30 | 10 | > th | dose dependent | no | NA | NA |
| 674 | 94.52 | radiation | 10 | 1440 | < th | dose independent | rect. | 14 | 1 |
| 753 | 94.69 | temperature | 30 | 30 | > th | dose independent | no | NA | NA |
| 755 | 94.69 | humidity | 90 | 4320 | < th | dose independent | rect. | 2 | 3 |
| 865 | 94.70 | humidity | 90 | 4320 | < th | dose independent | rect. | 3 | 1 |
| 892 | 94.84 | humidity | 90 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 899 | 94.90 | humidity | 90 | 720 | < th | dose independent | rect. | 1 | 11 |
| 900 | 94.91 | radiation | 20 | 90 | < th | dose independent | rect. | 10 | 1 |
| 932 | 94.99 | humidity | 90 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 955 | 95.03 | humidity | 90 | 4320 | > th | dose dependent | rect. | 4 | 1 |