Os12g0622200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os12g0622200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 44.92 | 0.315 | 8.96 | 0.163 | 0.464 | -1.5 | -0.279 | 0.981 | 0.0182 | 15.4 | 14.3 | 473 | -- | -- |
| 45.57 | 0.314 | 8.98 | 0.000483 | 0.465 | -1.48 | -0.177 | -- | -0.0307 | 15.4 | 14.18 | 473 | -- | -- |
| 45.16 | 0.313 | 8.96 | 0.152 | 0.466 | -1.51 | -- | 0.898 | 0.0157 | 15.4 | 14.2 | 472 | -- | -- |
| 45.66 | 0.315 | 8.98 | -0.00332 | 0.471 | -1.49 | -- | -- | -0.0259 | 15.4 | 13.82 | 467 | -- | -- |
| 46.89 | 0.319 | 8.95 | 0.246 | -- | -1.39 | -- | 1.06 | 0.0366 | -- | 6.283 | 975 | -- | -- |
| 70.6 | 0.394 | 9.02 | -0.331 | 0.34 | -- | -0.178 | -- | -0.246 | 11.6 | -- | -- | -- | -- |
| 70.73 | 0.394 | 9.02 | -0.338 | 0.341 | -- | -- | -- | -0.247 | 11.6 | -- | -- | -- | -- |
| 47.35 | 0.32 | 8.98 | 0.0412 | -- | -1.37 | -- | -- | -0.0237 | -- | 13.81 | 970 | -- | -- |
| 45.66 | 0.315 | 8.98 | -- | 0.472 | -1.49 | -- | -- | -0.0253 | 15.4 | 13.73 | 467 | -- | -- |
| 78.05 | 0.413 | 9.03 | -0.347 | -- | -- | -- | -- | -0.25 | -- | -- | -- | -- | -- |
| 73.74 | 0.402 | 9.01 | -- | 0.345 | -- | -- | -- | -0.209 | 11.6 | -- | -- | -- | -- |
| 47.39 | 0.321 | 8.98 | -- | -- | -1.35 | -- | -- | -0.0306 | -- | 13.34 | 969 | -- | -- |
| 81.24 | 0.421 | 9.02 | -- | -- | -- | -- | -- | -0.212 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 41.68 | temperature | 30 | 270 | < th | dose dependent | rect. | 5 | 20 |
| 4 | 42.15 | temperature | 10 | 270 | > th | dose dependent | rect. | 10 | 23 |
| 11 | 43.58 | temperature | 10 | 270 | > th | dose dependent | rect. | 23 | 22 |
| 34 | 44.70 | temperature | 10 | 270 | > th | dose dependent | rect. | 24 | 18 |
| 82 | 45.83 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 23 |
| 88 | 45.93 | temperature | 10 | 720 | > th | dose dependent | no | NA | NA |
| 91 | 45.95 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 23 |
| 99 | 46.03 | temperature | 10 | 1440 | > th | dose dependent | rect. | 7 | 8 |
| 110 | 46.06 | temperature | 15 | 720 | > th | dose dependent | rect. | 6 | 23 |
| 158 | 46.32 | temperature | 15 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 220 | 46.50 | temperature | 10 | 270 | > th | dose dependent | rect. | 12 | 17 |
| 225 | 46.52 | temperature | 30 | 270 | < th | dose dependent | rect. | 17 | 20 |
| 227 | 46.53 | temperature | 10 | 1440 | > th | dose dependent | sin | 23 | NA |
| 262 | 46.60 | temperature | 30 | 270 | < th | dose dependent | rect. | 18 | 18 |
| 437 | 47.01 | temperature | 10 | 1440 | > th | dose dependent | rect. | 8 | 1 |
| 486 | 47.10 | temperature | 30 | 720 | < th | dose dependent | rect. | 13 | 21 |
| 508 | 47.15 | temperature | 30 | 1440 | < th | dose dependent | rect. | 8 | 1 |
| 755 | 47.50 | temperature | 30 | 720 | < th | dose dependent | rect. | 22 | 23 |
| 756 | 47.51 | temperature | 30 | 720 | < th | dose dependent | no | NA | NA |
| 794 | 47.54 | temperature | 30 | 720 | < th | dose dependent | rect. | 20 | 23 |
| 907 | 47.68 | humidity | 60 | 14400 | < th | dose independent | rect. | 17 | 2 |
| 995 | 47.74 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 23 |