Os12g0621300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os12g0621300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 99.45 | 0.469 | 5.38 | 1.06 | 0.182 | -0.498 | -0.0223 | -1.58 | 0.203 | 14.2 | 70.03 | 4724 | -- | -- |
| 101.79 | 0.47 | 5.37 | 1.06 | 0.188 | -0.674 | -0.111 | -- | 0.209 | 13.9 | 76 | 3166 | -- | -- |
| 99.44 | 0.464 | 5.38 | 1.06 | 0.182 | -0.495 | -- | -1.58 | 0.203 | 14.1 | 70 | 4736 | -- | -- |
| 101.81 | 0.47 | 5.37 | 1.06 | 0.196 | -0.674 | -- | -- | 0.209 | 14.2 | 76 | 3188 | -- | -- |
| 100.75 | 0.467 | 5.38 | 1.04 | -- | -0.515 | -- | -1.82 | 0.219 | -- | 71 | 5355 | -- | -- |
| 111 | 0.494 | 5.36 | 0.989 | 0.175 | -- | 0.0573 | -- | 0.257 | 13.3 | -- | -- | -- | -- |
| 111.01 | 0.493 | 5.36 | 0.991 | 0.176 | -- | -- | -- | 0.257 | 13.5 | -- | -- | -- | -- |
| 102.6 | 0.472 | 5.37 | 1.04 | -- | -0.669 | -- | -- | 0.244 | -- | 84.02 | 2648 | -- | -- |
| 129.59 | 0.53 | 5.37 | -- | 0.183 | -0.687 | -- | -- | 0.219 | 14.3 | 94 | 3160 | -- | -- |
| 112.91 | 0.497 | 5.36 | 0.984 | -- | -- | -- | -- | 0.254 | -- | -- | -- | -- | -- |
| 136.9 | 0.547 | 5.39 | -- | 0.159 | -- | -- | -- | 0.147 | 13.3 | -- | -- | -- | -- |
| 129.93 | 0.531 | 5.38 | -- | -- | -0.702 | -- | -- | 0.196 | -- | 94 | 2655 | -- | -- |
| 138.45 | 0.549 | 5.39 | -- | -- | -- | -- | -- | 0.144 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 98.01 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 2 | 98.04 | wind | 3.0 | 14400 | < th | dose independent | rect. | 4 | 1 |
| 6 | 98.29 | wind | 3.0 | 14400 | > th | dose independent | rect. | 4 | 1 |
| 7 | 98.30 | wind | 3.0 | 14400 | > th | dose independent | rect. | 3 | 3 |
| 15 | 98.53 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 3 | 3 |
| 16 | 98.54 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 9 | 2 |
| 20 | 98.64 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 6 |
| 32 | 98.83 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 6 |
| 35 | 98.85 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 3 | 3 |
| 38 | 98.90 | wind | 3.0 | 14400 | < th | dose independent | rect. | 2 | 7 |
| 58 | 99.11 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 9 | 2 |
| 59 | 99.12 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 4 | 1 |
| 64 | 99.13 | humidity | 50.0 | 4320 | < th | dose independent | rect. | 14 | 4 |
| 83 | 99.14 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 84 | 99.15 | humidity | 50.0 | 4320 | < th | dose independent | sin | 14 | NA |
| 88 | 99.16 | humidity | 50.0 | 4320 | > th | dose independent | sin | 14 | NA |
| 89 | 99.16 | wind | 3.0 | 4320 | < th | dose independent | rect. | 8 | 1 |
| 91 | 99.16 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 14 | 3 |
| 92 | 99.16 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 14 | 5 |
| 93 | 99.16 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 14 | 9 |
| 101 | 99.17 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 14 | 13 |
| 102 | 99.17 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 14 | 19 |
| 122 | 99.22 | wind | 3.0 | 4320 | > th | dose independent | rect. | 8 | 1 |
| 130 | 99.26 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 163 | 99.33 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 15 | 1 |
| 174 | 99.37 | wind | 9.0 | 14400 | > th | dose independent | rect. | 6 | 5 |
| 182 | 99.39 | wind | 9.0 | 43200 | > th | dose independent | rect. | 10 | 4 |
| 249 | 99.56 | wind | 9.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 282 | 99.60 | wind | 9.0 | 43200 | < th | dose independent | rect. | 10 | 4 |
| 297 | 99.63 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 19 | 17 |
| 323 | 99.70 | wind | 9.0 | 14400 | < th | dose independent | rect. | 6 | 5 |
| 324 | 99.71 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 10 | 1 |
| 326 | 99.71 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 11 | 2 |
| 335 | 99.73 | humidity | 50.0 | 4320 | < th | dose dependent | sin | 11 | NA |
| 356 | 99.77 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 8 | 2 |
| 438 | 99.87 | wind | 9.0 | 43200 | > th | dose independent | rect. | 21 | 17 |
| 452 | 99.90 | humidity | 70.0 | 4320 | < th | dose dependent | rect. | 12 | 1 |
| 463 | 99.94 | humidity | 60.0 | 4320 | < th | dose dependent | sin | 13 | NA |
| 488 | 99.99 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 490 | 99.99 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 2 |
| 494 | 100.00 | wind | 9.0 | 43200 | > th | dose independent | rect. | 4 | 10 |
| 498 | 100.00 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 530 | 100.04 | wind | 9.0 | 43200 | > th | dose independent | rect. | 1 | 13 |
| 538 | 100.05 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 6 | 11 |
| 550 | 100.07 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 19 | 17 |
| 564 | 100.09 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 6 | 11 |
| 571 | 100.09 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 22 | 9 |
| 572 | 100.09 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 6 | 11 |
| 573 | 100.10 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 581 | 100.11 | humidity | 50.0 | 4320 | < th | dose independent | rect. | 15 | 23 |
| 591 | 100.13 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 597 | 100.13 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 2 |
| 605 | 100.14 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 2 | 10 |
| 624 | 100.15 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 12 | 1 |
| 625 | 100.15 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 627 | 100.15 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 10 | 4 |
| 628 | 100.15 | humidity | 70.0 | 4320 | < th | dose dependent | rect. | 16 | 22 |
| 629 | 100.16 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 634 | 100.16 | wind | 9.0 | 43200 | < th | dose independent | rect. | 21 | 17 |
| 637 | 100.17 | humidity | 50.0 | 4320 | < th | dose independent | rect. | 15 | 1 |
| 678 | 100.22 | wind | 9.0 | 43200 | < th | dose independent | rect. | 4 | 10 |
| 679 | 100.22 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 15 | 23 |
| 691 | 100.25 | wind | 3.0 | 14400 | < th | dose independent | sin | 8 | NA |
| 695 | 100.25 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 716 | 100.27 | humidity | 60.0 | 4320 | < th | dose dependent | rect. | 14 | 5 |
| 750 | 100.29 | wind | 9.0 | 43200 | < th | dose independent | rect. | 1 | 13 |
| 782 | 100.30 | humidity | 60.0 | 4320 | < th | dose dependent | rect. | 15 | 2 |
| 787 | 100.31 | humidity | 70.0 | 4320 | < th | dose independent | sin | 8 | NA |
| 824 | 100.34 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 6 | 21 |
| 836 | 100.35 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 3 | 8 |
| 844 | 100.36 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 6 | 12 |
| 849 | 100.36 | wind | 9.0 | 43200 | > th | dose independent | rect. | 21 | 19 |
| 852 | 100.36 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 22 | 19 |
| 867 | 100.37 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 9 |
| 885 | 100.37 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 24 | 17 |
| 908 | 100.38 | humidity | 50.0 | 4320 | < th | dose independent | no | NA | NA |